RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 HMGB1P1B2RPK0 211 aaPredicted RBP16.95■□□□□ 0.3
CLSTN1-205ENST00000477264 GCFC2P16383 781 aaKnown RBP16.95■□□□□ 0.3
CLSTN1-205ENST00000477264 ADORA1P30542 326 aa16.95■□□□□ 0.3
CLSTN1-205ENST00000477264 KRT2P35908 639 aa16.95■□□□□ 0.3
CLSTN1-205ENST00000477264 ZBED6P86452 979 aa16.95■□□□□ 0.3
CLSTN1-205ENST00000477264 CEP85LQ5SZL2 805 aa16.95■□□□□ 0.3
CLSTN1-205ENST00000477264 C3orf67Q6ZVT6 689 aa16.95■□□□□ 0.3
CLSTN1-205ENST00000477264 ARFGAP2Q8N6H7 521 aa16.95■□□□□ 0.3
CLSTN1-205ENST00000477264 SPATA4Q8NEY3 305 aa16.95■□□□□ 0.3
CLSTN1-205ENST00000477264 ARL8AQ96BM9 186 aa16.95■□□□□ 0.3
CLSTN1-205ENST00000477264 ALS2CR12Q96Q35 445 aa16.95■□□□□ 0.3
CLSTN1-205ENST00000477264 TAOK2Q9UL54 1235 aa16.95■□□□□ 0.3
CLSTN1-205ENST00000477264 PAK2Q13177 524 aa16.95■□□□□ 0.3
CLSTN1-205ENST00000477264 FIGNQ5HY92 759 aa16.95■□□□□ 0.3
CLSTN1-205ENST00000477264 CCDC24Q8N4L8 307 aa16.95■□□□□ 0.3
CLSTN1-205ENST00000477264 VGLL2Q8N8G2 317 aa16.95■□□□□ 0.3
CLSTN1-205ENST00000477264 TSEN2Q8NCE0 465 aaKnown RBP16.95■□□□□ 0.3
CLSTN1-205ENST00000477264 ZIM3Q96PE6 472 aa16.95■□□□□ 0.3
CLSTN1-205ENST00000477264 LRRC1Q9BTT6 524 aa16.95■□□□□ 0.3
CLSTN1-205ENST00000477264 TTYH3Q9C0H2 523 aa16.95■□□□□ 0.3
CLSTN1-205ENST00000477264 MAGEC2Q9UBF1 373 aaPredicted RBP16.95■□□□□ 0.3
CLSTN1-205ENST00000477264 RNF14Q9UBS8 474 aa16.95■□□□□ 0.3
CLSTN1-205ENST00000477264 DENND2AQ9ULE3 1009 aa16.95■□□□□ 0.3
CLSTN1-205ENST00000477264 A0A1W2PQJ5 194 aa16.94■□□□□ 0.3
CLSTN1-205ENST00000477264 ZNF185O15231 689 aa16.94■□□□□ 0.3
CLSTN1-205ENST00000477264 FAM107AO95990 144 aa16.94■□□□□ 0.3
CLSTN1-205ENST00000477264 SRGNP10124 158 aa16.94■□□□□ 0.3
CLSTN1-205ENST00000477264 NR1D1P20393 614 aa16.94■□□□□ 0.3
CLSTN1-205ENST00000477264 PAFAH1B1P43034 410 aa16.94■□□□□ 0.3
CLSTN1-205ENST00000477264 IFFO1Q0D2I5 559 aa16.94■□□□□ 0.3
CLSTN1-205ENST00000477264 SCARF1Q14162 830 aa16.94■□□□□ 0.3
CLSTN1-205ENST00000477264 PUM3Q15397 648 aaKnown RBP16.94■□□□□ 0.3
CLSTN1-205ENST00000477264 SPA17Q15506 151 aa16.94■□□□□ 0.3
CLSTN1-205ENST00000477264 CFAP58Q5T655 872 aa16.94■□□□□ 0.3
CLSTN1-205ENST00000477264 HAUS3Q68CZ6 603 aa16.94■□□□□ 0.3
CLSTN1-205ENST00000477264 IFT20Q8IY31 132 aa16.94■□□□□ 0.3
CLSTN1-205ENST00000477264 CCDC13Q8IYE1 715 aa16.94■□□□□ 0.3
CLSTN1-205ENST00000477264 P3H4Q92791 437 aa16.94■□□□□ 0.3
CLSTN1-205ENST00000477264 MIEF2Q96C03 454 aa16.94■□□□□ 0.3
CLSTN1-205ENST00000477264 TSKSQ9UJT2 592 aa16.94■□□□□ 0.3
CLSTN1-205ENST00000477264 ERICH2A1L162 156 aa16.94■□□□□ 0.3
CLSTN1-205ENST00000477264 SERPINB2P05120 415 aa16.94■□□□□ 0.3
CLSTN1-205ENST00000477264 TM4SF1P30408 202 aa16.94■□□□□ 0.3
CLSTN1-205ENST00000477264 EN1Q05925 392 aaPredicted RBP16.94■□□□□ 0.3
CLSTN1-205ENST00000477264 CRYMQ14894 314 aa16.94■□□□□ 0.3
CLSTN1-205ENST00000477264 WTAPQ15007 396 aa16.94■□□□□ 0.3
CLSTN1-205ENST00000477264 CCDC181Q5TID7 509 aa16.94■□□□□ 0.3
CLSTN1-205ENST00000477264 PPP4R3AQ6IN85 833 aa16.94■□□□□ 0.3
CLSTN1-205ENST00000477264 C8orf74Q6P047 294 aa16.94■□□□□ 0.3
CLSTN1-205ENST00000477264 PDXDC2PQ6P474 469 aa16.94■□□□□ 0.3
CLSTN1-205ENST00000477264 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.94■□□□□ 0.3
CLSTN1-205ENST00000477264 IQCA1Q86XH1 822 aa16.94■□□□□ 0.3
CLSTN1-205ENST00000477264 MYCBPAPQ8TBZ2 947 aa16.94■□□□□ 0.3
CLSTN1-205ENST00000477264 TBC1D22AQ8WUA7 517 aa16.94■□□□□ 0.3
CLSTN1-205ENST00000477264 NHEJ1Q9H9Q4 299 aaPredicted RBP16.94■□□□□ 0.3
CLSTN1-205ENST00000477264 DMGDHQ9UI17 866 aaKnown RBP16.94■□□□□ 0.3
CLSTN1-205ENST00000477264 ODF2LQ9ULJ1 636 aa16.94■□□□□ 0.3
CLSTN1-205ENST00000477264 DLEC1Q9Y238 1755 aa16.93■□□□□ 0.3
CLSTN1-205ENST00000477264 UBE2Q2LH0YL09 131 aa16.93■□□□□ 0.3
CLSTN1-205ENST00000477264 ATP2C1P98194 919 aaPredicted RBP16.93■□□□□ 0.3
CLSTN1-205ENST00000477264 SNCBQ16143 134 aa16.93■□□□□ 0.3
CLSTN1-205ENST00000477264 NLRP14Q86W24 1093 aa16.93■□□□□ 0.3
CLSTN1-205ENST00000477264 COL23A1Q86Y22 540 aaPredicted RBP16.93■□□□□ 0.3
CLSTN1-205ENST00000477264 NLGN1Q8N2Q7 840 aa16.93■□□□□ 0.3
CLSTN1-205ENST00000477264 HELBQ8NG08 1087 aaPredicted RBP16.93■□□□□ 0.3
CLSTN1-205ENST00000477264 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.93■□□□□ 0.3
CLSTN1-205ENST00000477264 LPIN2Q92539 896 aa16.93■□□□□ 0.3
CLSTN1-205ENST00000477264 LACRTQ9GZZ8 138 aa16.93■□□□□ 0.3
CLSTN1-205ENST00000477264 SH2D4AQ9H788 454 aa16.93■□□□□ 0.3
CLSTN1-205ENST00000477264 KIF3CO14782 793 aa16.92■□□□□ 0.3
CLSTN1-205ENST00000477264 MYCNP04198 464 aaPredicted RBP16.92■□□□□ 0.3
CLSTN1-205ENST00000477264 RPN1P04843 607 aaKnown RBP16.92■□□□□ 0.3
CLSTN1-205ENST00000477264 CASP1P29466 404 aa16.92■□□□□ 0.3
CLSTN1-205ENST00000477264 EZH2Q15910 746 aaKnown RBP16.92■□□□□ 0.3
CLSTN1-205ENST00000477264 PRR5LQ6MZQ0 368 aa16.92■□□□□ 0.3
CLSTN1-205ENST00000477264 ARMC9Q7Z3E5 817 aa16.92■□□□□ 0.3
CLSTN1-205ENST00000477264 FMNL3Q8IVF7 1028 aa16.92■□□□□ 0.3
CLSTN1-205ENST00000477264 N4BP2L2Q92802 583 aaPredicted RBP16.92■□□□□ 0.3
CLSTN1-205ENST00000477264 SLC40A1Q9NP59 571 aa16.92■□□□□ 0.3
CLSTN1-205ENST00000477264 EXOC1Q9NV70 894 aa16.92■□□□□ 0.3
CLSTN1-205ENST00000477264 ZSWIM5Q9P217 1185 aa16.92■□□□□ 0.3
CLSTN1-205ENST00000477264 MYL1P05976 194 aa16.92■□□□□ 0.3
CLSTN1-205ENST00000477264 SLC5A1P13866 664 aa16.92■□□□□ 0.3
CLSTN1-205ENST00000477264 EZRP15311 586 aaKnown RBP16.92■□□□□ 0.3
CLSTN1-205ENST00000477264 SLC8A1P32418 973 aa16.92■□□□□ 0.3
CLSTN1-205ENST00000477264 MDH1P40925 334 aaKnown RBP16.92■□□□□ 0.3
CLSTN1-205ENST00000477264 AKNAD1Q5T1N1 836 aa16.92■□□□□ 0.3
CLSTN1-205ENST00000477264 RNF187Q5TA31 235 aaPredicted RBP16.92■□□□□ 0.3
CLSTN1-205ENST00000477264 C6orf89Q6UWU4 347 aa16.92■□□□□ 0.3
CLSTN1-205ENST00000477264 CCDC121Q6ZUS5 278 aa16.92■□□□□ 0.3
CLSTN1-205ENST00000477264 TEX11Q8IYF3 940 aa16.92■□□□□ 0.3
CLSTN1-205ENST00000477264 IQCKQ8N0W5 287 aa16.92■□□□□ 0.3
CLSTN1-205ENST00000477264 NKX2-3Q8TAU0 364 aa16.92■□□□□ 0.3
CLSTN1-205ENST00000477264 OXER1Q8TDS5 423 aa16.92■□□□□ 0.3
CLSTN1-205ENST00000477264 WHAMMQ8TF30 809 aa16.92■□□□□ 0.3
CLSTN1-205ENST00000477264 RNPC3Q96LT9 517 aaKnown RBP16.92■□□□□ 0.3
CLSTN1-205ENST00000477264 OSBPL9Q96SU4 736 aa16.92■□□□□ 0.3
CLSTN1-205ENST00000477264 PHF20Q9BVI0 1012 aa16.92■□□□□ 0.3
CLSTN1-205ENST00000477264 RABEP2Q9H5N1 569 aa16.92■□□□□ 0.3
CLSTN1-205ENST00000477264 CD248Q9HCU0 757 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms