RNA–Protein interactions for RNA: ENST00000477200.1

PIKFYVE-209, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 3

Gene PIKFYVE, Length 636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-209ENST00000477200 SND1Q7KZF4 910 aaKnown RBP eCLIP6.41□□□□□ -1.38
PIKFYVE-209ENST00000477200 USP48Q86UV5 1035 aa6.41□□□□□ -1.38
PIKFYVE-209ENST00000477200 PPFIBP1Q86W92 1011 aa6.41□□□□□ -1.38
PIKFYVE-209ENST00000477200 TSPAN17Q96FV3 270 aa6.41□□□□□ -1.38
PIKFYVE-209ENST00000477200 SCAND2PQ9GZW5 306 aaPredicted RBP6.41□□□□□ -1.38
PIKFYVE-209ENST00000477200 GP6Q9HCN6 339 aa6.41□□□□□ -1.38
PIKFYVE-209ENST00000477200 TBC1D8O95759 1140 aa6.4□□□□□ -1.38
PIKFYVE-209ENST00000477200 PMS1P54277 932 aaKnown RBP6.4□□□□□ -1.38
PIKFYVE-209ENST00000477200 APOBRQ0VD83 1088 aa6.4□□□□□ -1.38
PIKFYVE-209ENST00000477200 TRIM26Q12899 539 aaPredicted RBP6.4□□□□□ -1.38
PIKFYVE-209ENST00000477200 NOL9Q5SY16 702 aaKnown RBP6.4□□□□□ -1.38
PIKFYVE-209ENST00000477200 AXDND1Q5T1B0 1012 aaPredicted RBP6.4□□□□□ -1.38
PIKFYVE-209ENST00000477200 SLITRK4Q8IW52 837 aa6.4□□□□□ -1.38
PIKFYVE-209ENST00000477200 TTC9BQ8N6N2 239 aa6.4□□□□□ -1.38
PIKFYVE-209ENST00000477200 ADAMTS17Q8TE56 1095 aa6.4□□□□□ -1.38
PIKFYVE-209ENST00000477200 NKD1Q969G9 470 aa6.4□□□□□ -1.38
PIKFYVE-209ENST00000477200 ZBTB8AQ96BR9 441 aa6.4□□□□□ -1.38
PIKFYVE-209ENST00000477200 OVOL3O00110 214 aa6.39□□□□□ -1.39
PIKFYVE-209ENST00000477200 PPP1R11O60927 126 aaPredicted RBP6.39□□□□□ -1.39
PIKFYVE-209ENST00000477200 PLATP00750 562 aa6.39□□□□□ -1.39
PIKFYVE-209ENST00000477200 CACNB2Q08289 660 aaPredicted RBP6.39□□□□□ -1.39
PIKFYVE-209ENST00000477200 SMAD4Q13485 552 aaKnown RBP6.39□□□□□ -1.39
PIKFYVE-209ENST00000477200 FIBCD1Q8N539 461 aa6.39□□□□□ -1.39
PIKFYVE-209ENST00000477200 CPA5Q8WXQ8 436 aa6.39□□□□□ -1.39
PIKFYVE-209ENST00000477200 SSBP3Q9BWW4 388 aaPredicted RBP6.39□□□□□ -1.39
PIKFYVE-209ENST00000477200 FHOD1Q9Y613 1164 aa6.39□□□□□ -1.39
PIKFYVE-209ENST00000477200 CD3EP07766 207 aa6.38□□□□□ -1.39
PIKFYVE-209ENST00000477200 CD247P20963 164 aa6.38□□□□□ -1.39
PIKFYVE-209ENST00000477200 TTLL7Q6ZT98 887 aa6.38□□□□□ -1.39
PIKFYVE-209ENST00000477200 DDX11Q96FC9 970 aa6.38□□□□□ -1.39
PIKFYVE-209ENST00000477200 ZNF451Q9Y4E5 1061 aa6.38□□□□□ -1.39
PIKFYVE-209ENST00000477200 NISCHQ9Y2I1 1504 aa6.37□□□□□ -1.39
PIKFYVE-209ENST00000477200 PATL2C9JE40 543 aaKnown RBP6.37□□□□□ -1.39
PIKFYVE-209ENST00000477200 Q8N1X5 172 aa6.37□□□□□ -1.39
PIKFYVE-209ENST00000477200 LINC00482Q8N8I6 264 aa6.37□□□□□ -1.39
PIKFYVE-209ENST00000477200 RGS22Q8NE09 1264 aa6.37□□□□□ -1.39
PIKFYVE-209ENST00000477200 SMARCC1Q92922 1105 aaPredicted RBP6.37□□□□□ -1.39
PIKFYVE-209ENST00000477200 TRAIPQ9BWF2 469 aa6.37□□□□□ -1.39
PIKFYVE-209ENST00000477200 NT5C1AQ9BXI3 368 aa6.37□□□□□ -1.39
PIKFYVE-209ENST00000477200 GGT7Q9UJ14 662 aa6.37□□□□□ -1.39
PIKFYVE-209ENST00000477200 RWDD3Q9Y3V2 267 aa6.37□□□□□ -1.39
PIKFYVE-209ENST00000477200 MYO15BQ96JP2 1530 aa6.36□□□□□ -1.39
PIKFYVE-209ENST00000477200 SLPIP03973 132 aa6.36□□□□□ -1.39
PIKFYVE-209ENST00000477200 TP53P04637 393 aaPredicted RBP6.36□□□□□ -1.39
PIKFYVE-209ENST00000477200 C6P13671 934 aa6.36□□□□□ -1.39
PIKFYVE-209ENST00000477200 HMGA2P52926 109 aa6.36□□□□□ -1.39
PIKFYVE-209ENST00000477200 SPRED1Q7Z699 444 aa6.36□□□□□ -1.39
PIKFYVE-209ENST00000477200 PEX11GQ96HA9 241 aa6.36□□□□□ -1.39
PIKFYVE-209ENST00000477200 SYT3Q9BQG1 590 aa6.36□□□□□ -1.39
PIKFYVE-209ENST00000477200 MCMBPQ9BTE3 642 aa6.36□□□□□ -1.39
PIKFYVE-209ENST00000477200 NOL6Q9H6R4 1146 aaKnown RBP6.36□□□□□ -1.39
PIKFYVE-209ENST00000477200 FAM86C1Q9NVL1 165 aa6.36□□□□□ -1.39
PIKFYVE-209ENST00000477200 ST6GALNAC2Q9UJ37 374 aa6.36□□□□□ -1.39
PIKFYVE-209ENST00000477200 INVSQ9Y283 1065 aa6.36□□□□□ -1.39
PIKFYVE-209ENST00000477200 SF3B6Q9Y3B4 125 aaKnown RBP6.36□□□□□ -1.39
PIKFYVE-209ENST00000477200 POU4F1Q01851 419 aa6.35□□□□□ -1.39
PIKFYVE-209ENST00000477200 SLC9A5Q14940 896 aa6.35□□□□□ -1.39
PIKFYVE-209ENST00000477200 RGL3Q3MIN7 710 aa6.35□□□□□ -1.39
PIKFYVE-209ENST00000477200 CABP7Q86V35 215 aa6.35□□□□□ -1.39
PIKFYVE-209ENST00000477200 LZTR1Q8N653 840 aa6.35□□□□□ -1.39
PIKFYVE-209ENST00000477200 CHST13Q8NET6 341 aa6.35□□□□□ -1.39
PIKFYVE-209ENST00000477200 DVL3Q92997 716 aaPredicted RBP6.35□□□□□ -1.39
PIKFYVE-209ENST00000477200 ZDHHC15Q96MV8 337 aa6.35□□□□□ -1.39
PIKFYVE-209ENST00000477200 GORASP1Q9BQQ3 440 aa6.35□□□□□ -1.39
PIKFYVE-209ENST00000477200 ZNRF3Q9ULT6 936 aa6.35□□□□□ -1.39
PIKFYVE-209ENST00000477200 SMARCA5O60264 1052 aaPredicted RBP6.34□□□□□ -1.39
PIKFYVE-209ENST00000477200 C8BP07358 591 aa6.34□□□□□ -1.39
PIKFYVE-209ENST00000477200 KRTAP1-1Q07627 177 aa6.34□□□□□ -1.39
PIKFYVE-209ENST00000477200 CDSNQ15517 529 aa6.34□□□□□ -1.39
PIKFYVE-209ENST00000477200 ZYXQ15942 572 aaKnown RBP6.34□□□□□ -1.39
PIKFYVE-209ENST00000477200 RCSD1Q6JBY9 416 aa6.34□□□□□ -1.39
PIKFYVE-209ENST00000477200 LIMS2Q7Z4I7 341 aa6.34□□□□□ -1.39
PIKFYVE-209ENST00000477200 TAB3Q8N5C8 712 aaPredicted RBP6.34□□□□□ -1.39
PIKFYVE-209ENST00000477200 NETO2Q8NC67 525 aa6.34□□□□□ -1.39
PIKFYVE-209ENST00000477200 SH3RF3Q8TEJ3 882 aaPredicted RBP6.34□□□□□ -1.39
PIKFYVE-209ENST00000477200 MTA3Q9BTC8 594 aa6.34□□□□□ -1.39
PIKFYVE-209ENST00000477200 NUDT5Q9UKK9 219 aa6.34□□□□□ -1.39
PIKFYVE-209ENST00000477200 ZBTB7AO95365 584 aa6.33□□□□□ -1.4
PIKFYVE-209ENST00000477200 ITGA4P13612 1032 aa6.33□□□□□ -1.4
PIKFYVE-209ENST00000477200 TACR2P21452 398 aa6.33□□□□□ -1.4
PIKFYVE-209ENST00000477200 RPL13P26373 211 aaKnown RBP6.33□□□□□ -1.4
PIKFYVE-209ENST00000477200 KIAA2012Q0VF49 1180 aa6.33□□□□□ -1.4
PIKFYVE-209ENST00000477200 HS2ST1Q7LGA3 356 aa6.33□□□□□ -1.4
PIKFYVE-209ENST00000477200 LGI4Q8N135 537 aa6.33□□□□□ -1.4
PIKFYVE-209ENST00000477200 C11orf84Q9BUA3 381 aaPredicted RBP6.33□□□□□ -1.4
PIKFYVE-209ENST00000477200 MENTQ9BUN1 341 aa6.33□□□□□ -1.4
PIKFYVE-209ENST00000477200 MRIQ9BWK5 157 aa6.33□□□□□ -1.4
PIKFYVE-209ENST00000477200 SIT1Q9Y3P8 196 aa6.33□□□□□ -1.4
PIKFYVE-209ENST00000477200 MROH6A6NGR9 719 aa6.32□□□□□ -1.4
PIKFYVE-209ENST00000477200 CYP2C8P10632 490 aa6.32□□□□□ -1.4
PIKFYVE-209ENST00000477200 THBS2P35442 1172 aa6.32□□□□□ -1.4
PIKFYVE-209ENST00000477200 ACVRL1P37023 503 aa6.32□□□□□ -1.4
PIKFYVE-209ENST00000477200 GDF5P43026 501 aa6.32□□□□□ -1.4
PIKFYVE-209ENST00000477200 PPP2R5DQ14738 602 aa6.32□□□□□ -1.4
PIKFYVE-209ENST00000477200 UNC5AQ6ZN44 842 aa6.32□□□□□ -1.4
PIKFYVE-209ENST00000477200 ZFPM1Q8IX07 1006 aa6.32□□□□□ -1.4
PIKFYVE-209ENST00000477200 GULP1Q9UBP9 304 aa6.32□□□□□ -1.4
PIKFYVE-209ENST00000477200 ZNF536O15090 1300 aa6.31□□□□□ -1.4
PIKFYVE-209ENST00000477200 A0A087WZG4 1122 aa6.31□□□□□ -1.4
PIKFYVE-209ENST00000477200 AURKAO14965 403 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms