RNA–Protein interactions for RNA: ENST00000476742.1

NPHP3-207, Transcript of nephrocystin 3, humanhuman

TSL 3

Gene NPHP3, Length 650 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-207ENST00000476742 JMJD8Q96S16 334 aa4.95□□□□□ -1.62
NPHP3-207ENST00000476742 MCMBPQ9BTE3 642 aa4.95□□□□□ -1.62
NPHP3-207ENST00000476742 NKX2-4Q9H2Z4 354 aa4.95□□□□□ -1.62
NPHP3-207ENST00000476742 YBX2Q9Y2T7 364 aaKnown RBP4.95□□□□□ -1.62
NPHP3-207ENST00000476742 NPHP3-ACAD11A0A0J9YXS1 232 aa4.94□□□□□ -1.62
NPHP3-207ENST00000476742 CPP00450 1065 aa4.94□□□□□ -1.62
NPHP3-207ENST00000476742 SNRPB2P08579 225 aaKnown RBP4.94□□□□□ -1.62
NPHP3-207ENST00000476742 PNLIPP16233 465 aa4.94□□□□□ -1.62
NPHP3-207ENST00000476742 PRKCAP17252 672 aa4.94□□□□□ -1.62
NPHP3-207ENST00000476742 SYN1P17600 705 aa4.94□□□□□ -1.62
NPHP3-207ENST00000476742 L1CAMP32004 1257 aa4.94□□□□□ -1.62
NPHP3-207ENST00000476742 PDE6BP35913 854 aa4.94□□□□□ -1.62
NPHP3-207ENST00000476742 KCNJ6P48051 423 aa4.94□□□□□ -1.62
NPHP3-207ENST00000476742 CYP4F8P98187 520 aa4.94□□□□□ -1.62
NPHP3-207ENST00000476742 IFRD2Q12894 506 aaPredicted RBP4.94□□□□□ -1.62
NPHP3-207ENST00000476742 HSP90AA2PQ14568 343 aaPredicted RBP4.94□□□□□ -1.62
NPHP3-207ENST00000476742 MLANAQ16655 118 aa4.94□□□□□ -1.62
NPHP3-207ENST00000476742 IQCEQ6IPM2 695 aa4.94□□□□□ -1.62
NPHP3-207ENST00000476742 LRP10Q7Z4F1 713 aa4.94□□□□□ -1.62
NPHP3-207ENST00000476742 IRF2BP1Q8IU81 584 aa4.94□□□□□ -1.62
NPHP3-207ENST00000476742 LRRC47Q8N1G4 583 aaKnown RBP4.94□□□□□ -1.62
NPHP3-207ENST00000476742 UBXN4Q92575 508 aa4.94□□□□□ -1.62
NPHP3-207ENST00000476742 COPS5Q92905 334 aa4.94□□□□□ -1.62
NPHP3-207ENST00000476742 INTS4Q96HW7 963 aaKnown RBP4.94□□□□□ -1.62
NPHP3-207ENST00000476742 DNAJC2Q99543 621 aaKnown RBP4.94□□□□□ -1.62
NPHP3-207ENST00000476742 IMPACTQ9P2X3 320 aa4.94□□□□□ -1.62
NPHP3-207ENST00000476742 MSRB2Q9Y3D2 182 aa4.94□□□□□ -1.62
NPHP3-207ENST00000476742 OR14I1A6ND48 311 aa4.93□□□□□ -1.62
NPHP3-207ENST00000476742 NOTOA8MTQ0 251 aa4.93□□□□□ -1.62
NPHP3-207ENST00000476742 RGS19P49795 217 aa4.93□□□□□ -1.62
NPHP3-207ENST00000476742 CORO7P57737 925 aa4.93□□□□□ -1.62
NPHP3-207ENST00000476742 PPP2R2AP63151 447 aa4.93□□□□□ -1.62
NPHP3-207ENST00000476742 RASGRF1Q13972 1273 aa4.93□□□□□ -1.62
NPHP3-207ENST00000476742 MTERF2Q49AM1 385 aa4.93□□□□□ -1.62
NPHP3-207ENST00000476742 ADGRF1Q5T601 910 aa4.93□□□□□ -1.62
NPHP3-207ENST00000476742 DIRC2Q96SL1 478 aa4.93□□□□□ -1.62
NPHP3-207ENST00000476742 PLCD4Q9BRC7 762 aa4.93□□□□□ -1.62
NPHP3-207ENST00000476742 LGR4Q9BXB1 951 aa4.93□□□□□ -1.62
NPHP3-207ENST00000476742 NSUN3Q9H649 340 aaKnown RBP4.93□□□□□ -1.62
NPHP3-207ENST00000476742 GPRC5CQ9NQ84 441 aa4.93□□□□□ -1.62
NPHP3-207ENST00000476742 ACSL6Q9UKU0 697 aa4.93□□□□□ -1.62
NPHP3-207ENST00000476742 A0A1W2PQU0 124 aa4.92□□□□□ -1.62
NPHP3-207ENST00000476742 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.92□□□□□ -1.62
NPHP3-207ENST00000476742 TBX1O43435 398 aa4.92□□□□□ -1.62
NPHP3-207ENST00000476742 NPHS1O60500 1241 aa4.92□□□□□ -1.62
NPHP3-207ENST00000476742 MPOP05164 745 aa4.92□□□□□ -1.62
NPHP3-207ENST00000476742 THBDP07204 575 aa4.92□□□□□ -1.62
NPHP3-207ENST00000476742 PLS3P13797 630 aa4.92□□□□□ -1.62
NPHP3-207ENST00000476742 ECI1P42126 302 aa4.92□□□□□ -1.62
NPHP3-207ENST00000476742 GALK1P51570 392 aa4.92□□□□□ -1.62
NPHP3-207ENST00000476742 TMEM62Q0P6H9 643 aa4.92□□□□□ -1.62
NPHP3-207ENST00000476742 SERINC3Q13530 473 aa4.92□□□□□ -1.62
NPHP3-207ENST00000476742 PRR23BQ6ZRT6 265 aa4.92□□□□□ -1.62
NPHP3-207ENST00000476742 CPNE8Q86YQ8 564 aa4.92□□□□□ -1.62
NPHP3-207ENST00000476742 NLGN2Q8NFZ4 835 aa4.92□□□□□ -1.62
NPHP3-207ENST00000476742 KCTD13Q8WZ19 329 aa4.92□□□□□ -1.62
NPHP3-207ENST00000476742 MKL1Q969V6 931 aa4.92□□□□□ -1.62
NPHP3-207ENST00000476742 SHISA4Q96DD7 197 aa4.92□□□□□ -1.62
NPHP3-207ENST00000476742 DEPDC7Q96QD5 511 aa4.92□□□□□ -1.62
NPHP3-207ENST00000476742 SRPK1Q96SB4 655 aaKnown RBP4.92□□□□□ -1.62
NPHP3-207ENST00000476742 MMP19Q99542 508 aa4.92□□□□□ -1.62
NPHP3-207ENST00000476742 AARSD1Q9BTE6 412 aaKnown RBP4.92□□□□□ -1.62
NPHP3-207ENST00000476742 EPB41L4BQ9H329 900 aa4.92□□□□□ -1.62
NPHP3-207ENST00000476742 DCP1AQ9NPI6 582 aaPredicted RBP4.92□□□□□ -1.62
NPHP3-207ENST00000476742 PDLIM7Q9NR12 457 aa4.92□□□□□ -1.62
NPHP3-207ENST00000476742 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.92□□□□□ -1.62
NPHP3-207ENST00000476742 CLEC1BQ9P126 229 aa4.92□□□□□ -1.62
NPHP3-207ENST00000476742 MEFVO15553 781 aaPredicted RBP4.91□□□□□ -1.62
NPHP3-207ENST00000476742 MYO1BO43795 1136 aa4.91□□□□□ -1.62
NPHP3-207ENST00000476742 SCG5P05408 212 aa4.91□□□□□ -1.62
NPHP3-207ENST00000476742 RANGAP1P46060 587 aaPredicted RBP4.91□□□□□ -1.62
NPHP3-207ENST00000476742 CEBPAP49715 358 aaPredicted RBP4.91□□□□□ -1.62
NPHP3-207ENST00000476742 SSRP1Q08945 709 aaKnown RBP4.91□□□□□ -1.62
NPHP3-207ENST00000476742 NFE2L2Q16236 605 aa4.91□□□□□ -1.62
NPHP3-207ENST00000476742 E4F1Q66K89 784 aaPredicted RBP4.91□□□□□ -1.62
NPHP3-207ENST00000476742 OLFML2BQ68BL8 750 aa4.91□□□□□ -1.62
NPHP3-207ENST00000476742 PRRT2Q7Z6L0 340 aaPredicted RBP4.91□□□□□ -1.62
NPHP3-207ENST00000476742 CABP7Q86V35 215 aa4.91□□□□□ -1.62
NPHP3-207ENST00000476742 FBXO15Q8NCQ5 510 aaPredicted RBP4.91□□□□□ -1.62
NPHP3-207ENST00000476742 DIO2Q92813 273 aa4.91□□□□□ -1.62
NPHP3-207ENST00000476742 IPO9Q96P70 1041 aaKnown RBP4.91□□□□□ -1.62
NPHP3-207ENST00000476742 SPATA9Q9BWV2 254 aa4.91□□□□□ -1.62
NPHP3-207ENST00000476742 OSBPL2Q9H1P3 480 aa4.91□□□□□ -1.62
NPHP3-207ENST00000476742 TRAV20A0A0B4J274 112 aa4.9□□□□□ -1.63
NPHP3-207ENST00000476742 ABLIM1O14639 778 aa4.9□□□□□ -1.63
NPHP3-207ENST00000476742 GFRA1P56159 465 aa4.9□□□□□ -1.63
NPHP3-207ENST00000476742 ERVFRD-1P60508 538 aa4.9□□□□□ -1.63
NPHP3-207ENST00000476742 MVKQ03426 396 aa4.9□□□□□ -1.63
NPHP3-207ENST00000476742 MAP4K2Q12851 820 aa4.9□□□□□ -1.63
NPHP3-207ENST00000476742 KCNAB2Q13303 367 aa4.9□□□□□ -1.63
NPHP3-207ENST00000476742 KIR3DS1Q14943 382 aa4.9□□□□□ -1.63
NPHP3-207ENST00000476742 BICRALQ6AI39 1079 aa4.9□□□□□ -1.63
NPHP3-207ENST00000476742 ZNF605Q86T29 641 aa4.9□□□□□ -1.63
NPHP3-207ENST00000476742 NPLOC4Q8TAT6 608 aa4.9□□□□□ -1.63
NPHP3-207ENST00000476742 USP33Q8TEY7 942 aa4.9□□□□□ -1.63
NPHP3-207ENST00000476742 FRS2Q8WU20 508 aa4.9□□□□□ -1.63
NPHP3-207ENST00000476742 SLC26A8Q96RN1 970 aa4.9□□□□□ -1.63
NPHP3-207ENST00000476742 IER2Q9BTL4 223 aa4.9□□□□□ -1.63
NPHP3-207ENST00000476742 PFDN2Q9UHV9 154 aa4.9□□□□□ -1.63
NPHP3-207ENST00000476742 C7orf72A4D263 438 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms