RNA–Protein interactions for RNA: ENST00000475952.1

NUDCD3-206, Transcript of NudC domain containing 3, humanhuman

TSL 2

Gene NUDCD3, Length 983 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-206ENST00000475952 FERMT2Q96AC1 680 aa13.28□□□□□ -0.28
NUDCD3-206ENST00000475952 TSEN34Q9BSV6 310 aaKnown RBP13.28□□□□□ -0.28
NUDCD3-206ENST00000475952 UBA5Q9GZZ9 404 aa13.28□□□□□ -0.28
NUDCD3-206ENST00000475952 KATNBL1Q9H079 304 aa13.28□□□□□ -0.28
NUDCD3-206ENST00000475952 CPVLQ9H3G5 476 aa13.28□□□□□ -0.28
NUDCD3-206ENST00000475952 RAPGEFL1Q9UHV5 662 aa13.28□□□□□ -0.28
NUDCD3-206ENST00000475952 ATP11BQ9Y2G3 1177 aa13.28□□□□□ -0.28
NUDCD3-206ENST00000475952 ASTN1O14525 1302 aa13.28□□□□□ -0.28
NUDCD3-206ENST00000475952 ABCB11O95342 1321 aa13.28□□□□□ -0.28
NUDCD3-206ENST00000475952 DOCK5Q9H7D0 1870 aa13.27□□□□□ -0.28
NUDCD3-206ENST00000475952 A0A1W2PQ45 241 aaPredicted RBP13.27□□□□□ -0.29
NUDCD3-206ENST00000475952 A0A1W2PQY0 241 aa13.27□□□□□ -0.29
NUDCD3-206ENST00000475952 MOXD2PA6NHM9 499 aa13.27□□□□□ -0.29
NUDCD3-206ENST00000475952 C6orf222P0C671 652 aaPredicted RBP13.27□□□□□ -0.29
NUDCD3-206ENST00000475952 CALML3P27482 149 aa13.27□□□□□ -0.29
NUDCD3-206ENST00000475952 CST5P28325 142 aaPredicted RBP13.27□□□□□ -0.29
NUDCD3-206ENST00000475952 RPS6P62753 249 aaKnown RBP13.27□□□□□ -0.29
NUDCD3-206ENST00000475952 C1orf53Q5VUE5 145 aa13.27□□□□□ -0.29
NUDCD3-206ENST00000475952 SLC30A10Q6XR72 485 aa13.27□□□□□ -0.29
NUDCD3-206ENST00000475952 STOX1Q6ZVD7 989 aa13.27□□□□□ -0.29
NUDCD3-206ENST00000475952 USP38Q8NB14 1042 aa13.27□□□□□ -0.29
NUDCD3-206ENST00000475952 PCSK9Q8NBP7 692 aaKnown RBP13.27□□□□□ -0.29
NUDCD3-206ENST00000475952 CLEC4DQ8WXI8 215 aa13.27□□□□□ -0.29
NUDCD3-206ENST00000475952 MAF1Q9H063 256 aa13.27□□□□□ -0.29
NUDCD3-206ENST00000475952 LSG1Q9H089 658 aaKnown RBP13.27□□□□□ -0.29
NUDCD3-206ENST00000475952 VTA1Q9NP79 307 aa13.27□□□□□ -0.29
NUDCD3-206ENST00000475952 ANO2Q9NQ90 1003 aa13.27□□□□□ -0.29
NUDCD3-206ENST00000475952 SCN10AQ9Y5Y9 1956 aa13.27□□□□□ -0.29
NUDCD3-206ENST00000475952 B4DLN1 442 aa13.26□□□□□ -0.29
NUDCD3-206ENST00000475952 TNFRSF10AO00220 468 aa13.26□□□□□ -0.29
NUDCD3-206ENST00000475952 ADCY6O43306 1168 aa13.26□□□□□ -0.29
NUDCD3-206ENST00000475952 MRPL12P52815 198 aaKnown RBP13.26□□□□□ -0.29
NUDCD3-206ENST00000475952 GJA9P57773 515 aa13.26□□□□□ -0.29
NUDCD3-206ENST00000475952 TNFAIP2Q03169 654 aa13.26□□□□□ -0.29
NUDCD3-206ENST00000475952 QRICH1Q2TAL8 776 aa13.26□□□□□ -0.29
NUDCD3-206ENST00000475952 TMEM67Q5HYA8 995 aa13.26□□□□□ -0.29
NUDCD3-206ENST00000475952 TJAP1Q5JTD0 557 aa13.26□□□□□ -0.29
NUDCD3-206ENST00000475952 NOL8Q76FK4 1167 aaKnown RBP13.26□□□□□ -0.29
NUDCD3-206ENST00000475952 SKAP1Q86WV1 359 aa13.26□□□□□ -0.29
NUDCD3-206ENST00000475952 FBXO11Q86XK2 927 aa13.26□□□□□ -0.29
NUDCD3-206ENST00000475952 FBXO16Q8IX29 292 aaPredicted RBP13.26□□□□□ -0.29
NUDCD3-206ENST00000475952 MB21D2Q8IYB1 491 aaPredicted RBP13.26□□□□□ -0.29
NUDCD3-206ENST00000475952 KLHDC9Q8NEP7 349 aa13.26□□□□□ -0.29
NUDCD3-206ENST00000475952 DNERQ8NFT8 737 aa13.26□□□□□ -0.29
NUDCD3-206ENST00000475952 MORC4Q8TE76 937 aa13.26□□□□□ -0.29
NUDCD3-206ENST00000475952 NUP133Q8WUM0 1156 aa13.26□□□□□ -0.29
NUDCD3-206ENST00000475952 BADQ92934 168 aa13.26□□□□□ -0.29
NUDCD3-206ENST00000475952 UPF3AQ9H1J1 476 aaKnown RBP13.26□□□□□ -0.29
NUDCD3-206ENST00000475952 PRDM5Q9NQX1 630 aaPredicted RBP13.26□□□□□ -0.29
NUDCD3-206ENST00000475952 STARD7Q9NQZ5 370 aa13.26□□□□□ -0.29
NUDCD3-206ENST00000475952 MAD2L2Q9UI95 211 aa13.26□□□□□ -0.29
NUDCD3-206ENST00000475952 TAF6LQ9Y6J9 622 aa13.26□□□□□ -0.29
NUDCD3-206ENST00000475952 KLRF2D3W0D1 207 aa13.25□□□□□ -0.29
NUDCD3-206ENST00000475952 CDC45O75419 566 aa13.25□□□□□ -0.29
NUDCD3-206ENST00000475952 ACLYP53396 1101 aa13.25□□□□□ -0.29
NUDCD3-206ENST00000475952 GRM4Q14833 912 aa13.25□□□□□ -0.29
NUDCD3-206ENST00000475952 TRIM60Q495X7 471 aa13.25□□□□□ -0.29
NUDCD3-206ENST00000475952 RNF20Q5VTR2 975 aa13.25□□□□□ -0.29
NUDCD3-206ENST00000475952 EEPD1Q7L9B9 569 aa13.25□□□□□ -0.29
NUDCD3-206ENST00000475952 CHST3Q7LGC8 479 aa13.25□□□□□ -0.29
NUDCD3-206ENST00000475952 CATIPQ7Z7H3 387 aa13.25□□□□□ -0.29
NUDCD3-206ENST00000475952 TLK2Q86UE8 772 aa13.25□□□□□ -0.29
NUDCD3-206ENST00000475952 MCF2L2Q86YR7 1114 aa13.25□□□□□ -0.29
NUDCD3-206ENST00000475952 STAG2Q8N3U4 1231 aa13.25□□□□□ -0.29
NUDCD3-206ENST00000475952 RGS22Q8NE09 1264 aa13.25□□□□□ -0.29
NUDCD3-206ENST00000475952 GLT1D1Q96MS3 346 aa13.25□□□□□ -0.29
NUDCD3-206ENST00000475952 PURBQ96QR8 312 aaKnown RBP13.25□□□□□ -0.29
NUDCD3-206ENST00000475952 MTA3Q9BTC8 594 aa13.25□□□□□ -0.29
NUDCD3-206ENST00000475952 AMNQ9BXJ7 453 aa13.25□□□□□ -0.29
NUDCD3-206ENST00000475952 JMJD4Q9H9V9 463 aa13.25□□□□□ -0.29
NUDCD3-206ENST00000475952 VAT1LQ9HCJ6 419 aa13.25□□□□□ -0.29
NUDCD3-206ENST00000475952 PDLIM7Q9NR12 457 aa13.25□□□□□ -0.29
NUDCD3-206ENST00000475952 MRPL11Q9Y3B7 192 aaKnown RBP13.25□□□□□ -0.29
NUDCD3-206ENST00000475952 KAT6AQ92794 2004 aa13.25□□□□□ -0.29
NUDCD3-206ENST00000475952 MROH7Q68CQ1 1323 aa13.24□□□□□ -0.29
NUDCD3-206ENST00000475952 TRIP12Q14669 1992 aaPredicted RBP13.24□□□□□ -0.29
NUDCD3-206ENST00000475952 TMEM265A0A087WTH1 108 aa13.24□□□□□ -0.29
NUDCD3-206ENST00000475952 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.24□□□□□ -0.29
NUDCD3-206ENST00000475952 PALM3A6NDB9 673 aaPredicted RBP13.24□□□□□ -0.29
NUDCD3-206ENST00000475952 MYADML2A6NDP7 307 aa13.24□□□□□ -0.29
NUDCD3-206ENST00000475952 SLC27A2O14975 620 aa13.24□□□□□ -0.29
NUDCD3-206ENST00000475952 MCM5P33992 734 aa13.24□□□□□ -0.29
NUDCD3-206ENST00000475952 ANTXR2P58335 489 aa13.24□□□□□ -0.29
NUDCD3-206ENST00000475952 PDE4DQ08499 809 aa13.24□□□□□ -0.29
NUDCD3-206ENST00000475952 TRAF1Q13077 416 aa13.24□□□□□ -0.29
NUDCD3-206ENST00000475952 KCNA10Q16322 511 aa13.24□□□□□ -0.29
NUDCD3-206ENST00000475952 CREB3L3Q68CJ9 461 aa13.24□□□□□ -0.29
NUDCD3-206ENST00000475952 IQSEC1Q6DN90 963 aa13.24□□□□□ -0.29
NUDCD3-206ENST00000475952 SH3RF1Q7Z6J0 888 aa13.24□□□□□ -0.29
NUDCD3-206ENST00000475952 AP5M1Q9H0R1 490 aa13.24□□□□□ -0.29
NUDCD3-206ENST00000475952 GBF1Q92538 1859 aa13.24□□□□□ -0.29
NUDCD3-206ENST00000475952 TANC1Q9C0D5 1861 aa13.24□□□□□ -0.29
NUDCD3-206ENST00000475952 ELP1O95163 1332 aa13.23□□□□□ -0.29
NUDCD3-206ENST00000475952 TRIM43BA6NCK2 446 aa13.23□□□□□ -0.29
NUDCD3-206ENST00000475952 ZBTB5O15062 677 aa13.23□□□□□ -0.29
NUDCD3-206ENST00000475952 DDAH1O94760 285 aa13.23□□□□□ -0.29
NUDCD3-206ENST00000475952 ASGR1P07306 291 aa13.23□□□□□ -0.29
NUDCD3-206ENST00000475952 NKX3-2P78367 333 aa13.23□□□□□ -0.29
NUDCD3-206ENST00000475952 TROAPQ12815 778 aa13.23□□□□□ -0.29
NUDCD3-206ENST00000475952 NECTIN1Q15223 517 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms