RNA–Protein interactions for RNA: ENST00000475580.5

VPS8-222, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 318 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-222ENST00000475580 COL20A1Q9P218 1284 aa19.25■□□□□ 0.67
VPS8-222ENST00000475580 ADD3Q9UEY8 706 aaKnown RBP19.25■□□□□ 0.67
VPS8-222ENST00000475580 PHF24Q9UPV7 400 aa19.25■□□□□ 0.67
VPS8-222ENST00000475580 CTAGE5O15320 804 aa19.24■□□□□ 0.67
VPS8-222ENST00000475580 EDNRBP24530 442 aa19.24■□□□□ 0.67
VPS8-222ENST00000475580 HSPA4P34932 840 aa19.24■□□□□ 0.67
VPS8-222ENST00000475580 ADCYAP1R1P41586 468 aa19.24■□□□□ 0.67
VPS8-222ENST00000475580 ATN1P54259 1190 aaPredicted RBP19.24■□□□□ 0.67
VPS8-222ENST00000475580 TMEM63BQ5T3F8 832 aa19.24■□□□□ 0.67
VPS8-222ENST00000475580 CCSAPQ6IQ19 270 aaPredicted RBP19.24■□□□□ 0.67
VPS8-222ENST00000475580 EEPD1Q7L9B9 569 aa19.24■□□□□ 0.67
VPS8-222ENST00000475580 RNF180Q86T96 592 aa19.24■□□□□ 0.67
VPS8-222ENST00000475580 SGMS1Q86VZ5 419 aa19.24■□□□□ 0.67
VPS8-222ENST00000475580 SYTL5Q8TDW5 730 aaPredicted RBP19.24■□□□□ 0.67
VPS8-222ENST00000475580 MRPL11Q9Y3B7 192 aaKnown RBP19.24■□□□□ 0.67
VPS8-222ENST00000475580 CCDC69A6NI79 296 aa19.23■□□□□ 0.67
VPS8-222ENST00000475580 RXRAP19793 462 aa19.23■□□□□ 0.67
VPS8-222ENST00000475580 PTGS1P23219 599 aa19.23■□□□□ 0.67
VPS8-222ENST00000475580 CST5P28325 142 aaPredicted RBP19.23■□□□□ 0.67
VPS8-222ENST00000475580 GJA9P57773 515 aa19.23■□□□□ 0.67
VPS8-222ENST00000475580 NKX3-2P78367 333 aa19.23■□□□□ 0.67
VPS8-222ENST00000475580 GHRHRQ02643 423 aa19.23■□□□□ 0.67
VPS8-222ENST00000475580 SLC39A5Q6ZMH5 540 aa19.23■□□□□ 0.67
VPS8-222ENST00000475580 NFXL1Q6ZNB6 911 aa19.23■□□□□ 0.67
VPS8-222ENST00000475580 DHX32Q7L7V1 743 aaKnown RBP19.23■□□□□ 0.67
VPS8-222ENST00000475580 HOMER1Q86YM7 354 aa19.23■□□□□ 0.67
VPS8-222ENST00000475580 DNERQ8NFT8 737 aa19.23■□□□□ 0.67
VPS8-222ENST00000475580 FERMT2Q96AC1 680 aa19.23■□□□□ 0.67
VPS8-222ENST00000475580 TCEANC2Q96MN5 208 aa19.23■□□□□ 0.67
VPS8-222ENST00000475580 VTA1Q9NP79 307 aa19.23■□□□□ 0.67
VPS8-222ENST00000475580 GNEQ9Y223 722 aaKnown RBP19.23■□□□□ 0.67
VPS8-222ENST00000475580 PCDHA1Q9Y5I3 950 aa19.23■□□□□ 0.67
VPS8-222ENST00000475580 PLEKHA8P1O95397 391 aa19.22■□□□□ 0.67
VPS8-222ENST00000475580 SMPD1P17405 629 aa19.22■□□□□ 0.67
VPS8-222ENST00000475580 TNFAIP2Q03169 654 aa19.22■□□□□ 0.67
VPS8-222ENST00000475580 KRT32Q14532 448 aa19.22■□□□□ 0.67
VPS8-222ENST00000475580 SNX17Q15036 470 aa19.22■□□□□ 0.67
VPS8-222ENST00000475580 MCF2L2Q86YR7 1114 aa19.22■□□□□ 0.67
VPS8-222ENST00000475580 RAB11FIP4Q86YS3 637 aa19.22■□□□□ 0.67
VPS8-222ENST00000475580 CTCFLQ8NI51 663 aaPredicted RBP19.22■□□□□ 0.67
VPS8-222ENST00000475580 TSEN34Q9BSV6 310 aaKnown RBP19.22■□□□□ 0.67
VPS8-222ENST00000475580 SPZ1Q9BXG8 430 aa19.22■□□□□ 0.67
VPS8-222ENST00000475580 PRO3102Q9H379 93 aa19.22■□□□□ 0.67
VPS8-222ENST00000475580 PCDH10Q9P2E7 1040 aa19.22■□□□□ 0.67
VPS8-222ENST00000475580 ZMYND8Q9ULU4 1186 aaPredicted RBP19.22■□□□□ 0.67
VPS8-222ENST00000475580 COLQQ9Y215 455 aaPredicted RBP19.22■□□□□ 0.67
VPS8-222ENST00000475580 SNX14Q9Y5W7 946 aa19.22■□□□□ 0.67
VPS8-222ENST00000475580 PNMA6FA0A0J9YX94 578 aa19.21■□□□□ 0.67
VPS8-222ENST00000475580 A0A1W2PQ45 241 aaPredicted RBP19.21■□□□□ 0.67
VPS8-222ENST00000475580 A0A1W2PQY0 241 aa19.21■□□□□ 0.67
VPS8-222ENST00000475580 RBM47A0AV96 593 aaKnown RBP19.21■□□□□ 0.67
VPS8-222ENST00000475580 KIF5BP33176 963 aa19.21■□□□□ 0.67
VPS8-222ENST00000475580 HSD17B4P51659 736 aa19.21■□□□□ 0.67
VPS8-222ENST00000475580 RTP1P59025 263 aa19.21■□□□□ 0.67
VPS8-222ENST00000475580 SRBD1Q8N5C6 995 aaKnown RBP19.21■□□□□ 0.67
VPS8-222ENST00000475580 TAAR1Q96RJ0 339 aa19.21■□□□□ 0.67
VPS8-222ENST00000475580 REC8O95072 547 aa19.2■□□□□ 0.66
VPS8-222ENST00000475580 C6orf222P0C671 652 aaPredicted RBP19.2■□□□□ 0.66
VPS8-222ENST00000475580 CPA1P15085 419 aa19.2■□□□□ 0.66
VPS8-222ENST00000475580 SYN1P17600 705 aa19.2■□□□□ 0.66
VPS8-222ENST00000475580 SMARCA1P28370 1054 aa19.2■□□□□ 0.66
VPS8-222ENST00000475580 ACLYP53396 1101 aa19.2■□□□□ 0.66
VPS8-222ENST00000475580 KCNA10Q16322 511 aa19.2■□□□□ 0.66
VPS8-222ENST00000475580 IQSEC1Q6DN90 963 aa19.2■□□□□ 0.66
VPS8-222ENST00000475580 CHRDL2Q6WN34 429 aa19.2■□□□□ 0.66
VPS8-222ENST00000475580 BRPF3Q9ULD4 1205 aa19.2■□□□□ 0.66
VPS8-222ENST00000475580 SLC12A7Q9Y666 1083 aa19.2■□□□□ 0.66
VPS8-222ENST00000475580 CFBP00751 764 aa19.19■□□□□ 0.66
VPS8-222ENST00000475580 CALM1P0DP23 149 aa19.19■□□□□ 0.66
VPS8-222ENST00000475580 CALM2P0DP24 149 aa19.19■□□□□ 0.66
VPS8-222ENST00000475580 CALM3P0DP25 149 aa19.19■□□□□ 0.66
VPS8-222ENST00000475580 PDE4DQ08499 809 aa19.19■□□□□ 0.66
VPS8-222ENST00000475580 C1orf53Q5VUE5 145 aa19.19■□□□□ 0.66
VPS8-222ENST00000475580 APOA5Q6Q788 366 aa19.19■□□□□ 0.66
VPS8-222ENST00000475580 TLK2Q86UE8 772 aa19.19■□□□□ 0.66
VPS8-222ENST00000475580 CMTR1Q8N1G2 835 aaKnown RBP19.19■□□□□ 0.66
VPS8-222ENST00000475580 PIBF1Q8WXW3 757 aa19.19■□□□□ 0.66
VPS8-222ENST00000475580 LZTS2Q9BRK4 669 aa19.19■□□□□ 0.66
VPS8-222ENST00000475580 MOXD2PA6NHM9 499 aa19.18■□□□□ 0.66
VPS8-222ENST00000475580 GNAQP50148 359 aa19.18■□□□□ 0.66
VPS8-222ENST00000475580 BEX3Q00994 111 aa19.18■□□□□ 0.66
VPS8-222ENST00000475580 TRIM60Q495X7 471 aa19.18■□□□□ 0.66
VPS8-222ENST00000475580 DUSP28Q4G0W2 176 aa19.18■□□□□ 0.66
VPS8-222ENST00000475580 HABP4Q5JVS0 413 aaKnown RBP19.18■□□□□ 0.66
VPS8-222ENST00000475580 TMTC3Q6ZXV5 915 aa19.18■□□□□ 0.66
VPS8-222ENST00000475580 NOL8Q76FK4 1167 aaKnown RBP19.18■□□□□ 0.66
VPS8-222ENST00000475580 MICU3Q86XE3 530 aa19.18■□□□□ 0.66
VPS8-222ENST00000475580 FANCBQ8NB91 859 aa19.18■□□□□ 0.66
VPS8-222ENST00000475580 JAKMIP1Q96N16 626 aaKnown RBP19.18■□□□□ 0.66
VPS8-222ENST00000475580 EPB41L2O43491 1005 aaKnown RBP19.17■□□□□ 0.66
VPS8-222ENST00000475580 ASGR1P07306 291 aa19.17■□□□□ 0.66
VPS8-222ENST00000475580 HMGB1P09429 215 aaKnown RBP19.17■□□□□ 0.66
VPS8-222ENST00000475580 HOXA13P31271 388 aaPredicted RBP19.17■□□□□ 0.66
VPS8-222ENST00000475580 GNASQ5JWF2 1037 aa19.17■□□□□ 0.66
VPS8-222ENST00000475580 NSUN6Q8TEA1 469 aaKnown RBP19.17■□□□□ 0.66
VPS8-222ENST00000475580 RRP36Q96EU6 259 aaKnown RBP19.17■□□□□ 0.66
VPS8-222ENST00000475580 RMDN3Q96TC7 470 aa19.17■□□□□ 0.66
VPS8-222ENST00000475580 MPHOSPH6Q99547 160 aaKnown RBP19.17■□□□□ 0.66
VPS8-222ENST00000475580 GDF15Q99988 308 aa19.17■□□□□ 0.66
VPS8-222ENST00000475580 WDR11Q9BZH6 1224 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms