RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 XIRP2A4UGR9 3374 aa24.22■■□□□ 1.47
VPS36-203ENST00000475375 MYL3P08590 195 aa24.21■■□□□ 1.47
VPS36-203ENST00000475375 CTDSPL2Q05D32 466 aa24.21■■□□□ 1.47
VPS36-203ENST00000475375 TTLL4Q14679 1199 aa24.21■■□□□ 1.47
VPS36-203ENST00000475375 GPHNQ9NQX3 736 aaPredicted RBP24.21■■□□□ 1.47
VPS36-203ENST00000475375 POLR3EQ9NVU0 708 aa24.21■■□□□ 1.47
VPS36-203ENST00000475375 ADD3Q9UEY8 706 aaKnown RBP24.21■■□□□ 1.47
VPS36-203ENST00000475375 BDP1A6H8Y1 2624 aa24.21■■□□□ 1.47
VPS36-203ENST00000475375 TNKSO95271 1327 aa24.2■■□□□ 1.46
VPS36-203ENST00000475375 ERC2O15083 957 aa24.2■■□□□ 1.46
VPS36-203ENST00000475375 RANBP6O60518 1105 aaKnown RBP24.2■■□□□ 1.46
VPS36-203ENST00000475375 ICAM1P05362 532 aa24.2■■□□□ 1.46
VPS36-203ENST00000475375 PFKMP08237 780 aa24.2■■□□□ 1.46
VPS36-203ENST00000475375 DUSP28Q4G0W2 176 aa24.2■■□□□ 1.46
VPS36-203ENST00000475375 FAM47CQ5HY64 1035 aa24.2■■□□□ 1.46
VPS36-203ENST00000475375 TMEM67Q5HYA8 995 aa24.2■■□□□ 1.46
VPS36-203ENST00000475375 NECAB3Q96P71 396 aaPredicted RBP24.2■■□□□ 1.46
VPS36-203ENST00000475375 WDR11Q9BZH6 1224 aa24.2■■□□□ 1.46
VPS36-203ENST00000475375 INCENPQ9NQS7 918 aa24.2■■□□□ 1.46
VPS36-203ENST00000475375 REV3LO60673 3130 aa24.19■■□□□ 1.46
VPS36-203ENST00000475375 CPT1AP50416 773 aa24.19■■□□□ 1.46
VPS36-203ENST00000475375 BAATQ14032 418 aaPredicted RBP24.19■■□□□ 1.46
VPS36-203ENST00000475375 IL17RBQ9NRM6 502 aa24.19■■□□□ 1.46
VPS36-203ENST00000475375 PTPDC1A2A3K4 754 aa24.18■■□□□ 1.46
VPS36-203ENST00000475375 GTPBP6O43824 516 aaPredicted RBP24.18■■□□□ 1.46
VPS36-203ENST00000475375 ACTN1P12814 892 aa24.18■■□□□ 1.46
VPS36-203ENST00000475375 SLC16A2P36021 539 aa24.18■■□□□ 1.46
VPS36-203ENST00000475375 ALDH5A1P51649 535 aaPredicted RBP24.18■■□□□ 1.46
VPS36-203ENST00000475375 TFF2Q03403 129 aa24.18■■□□□ 1.46
VPS36-203ENST00000475375 AAK1Q2M2I8 961 aa24.18■■□□□ 1.46
VPS36-203ENST00000475375 ZMYM1Q5SVZ6 1142 aa24.18■■□□□ 1.46
VPS36-203ENST00000475375 OR6J1Q8NGC5 347 aa24.18■■□□□ 1.46
VPS36-203ENST00000475375 MORC4Q8TE76 937 aa24.18■■□□□ 1.46
VPS36-203ENST00000475375 CERS4Q9HA82 394 aa24.18■■□□□ 1.46
VPS36-203ENST00000475375 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.18■■□□□ 1.46
VPS36-203ENST00000475375 TTC41PQ6P2S7 1318 aa24.17■■□□□ 1.46
VPS36-203ENST00000475375 RFXAPO00287 272 aa24.17■■□□□ 1.46
VPS36-203ENST00000475375 CA3P07451 260 aa24.17■■□□□ 1.46
VPS36-203ENST00000475375 PURAQ00577 322 aaKnown RBP24.17■■□□□ 1.46
VPS36-203ENST00000475375 BRDTQ58F21 947 aaPredicted RBP24.17■■□□□ 1.46
VPS36-203ENST00000475375 DCAF4Q8WV16 495 aa24.17■■□□□ 1.46
VPS36-203ENST00000475375 VWCEQ96DN2 955 aa24.17■■□□□ 1.46
VPS36-203ENST00000475375 MTG1Q9BT17 334 aaPredicted RBP24.17■■□□□ 1.46
VPS36-203ENST00000475375 TOMM22Q9NS69 142 aa24.17■■□□□ 1.46
VPS36-203ENST00000475375 NFIBO00712 420 aa24.16■■□□□ 1.46
VPS36-203ENST00000475375 TTBK2Q6IQ55 1244 aa24.16■■□□□ 1.46
VPS36-203ENST00000475375 FTOQ9C0B1 505 aaKnown RBP eCLIP24.16■■□□□ 1.46
VPS36-203ENST00000475375 RANBP17Q9H2T7 1088 aaKnown RBP24.16■■□□□ 1.46
VPS36-203ENST00000475375 RAD50Q92878 1312 aa24.15■■□□□ 1.46
VPS36-203ENST00000475375 BMP1P13497 986 aa24.15■■□□□ 1.46
VPS36-203ENST00000475375 CALML3P27482 149 aa24.15■■□□□ 1.46
VPS36-203ENST00000475375 KCNQ1P51787 676 aa24.15■■□□□ 1.46
VPS36-203ENST00000475375 NBPF20Q3BBV1 942 aa24.15■■□□□ 1.46
VPS36-203ENST00000475375 SYDE2Q5VT97 1194 aa24.15■■□□□ 1.46
VPS36-203ENST00000475375 RETREG2Q8NC44 543 aa24.15■■□□□ 1.46
VPS36-203ENST00000475375 PPP1R13LQ8WUF5 828 aa24.15■■□□□ 1.46
VPS36-203ENST00000475375 FRMPD2Q68DX3 1309 aaPredicted RBP24.14■■□□□ 1.46
VPS36-203ENST00000475375 CHMP4BP1P59074 171 aa24.14■■□□□ 1.45
VPS36-203ENST00000475375 PDE4DQ08499 809 aa24.14■■□□□ 1.45
VPS36-203ENST00000475375 PPP2R5BQ15173 497 aa24.14■■□□□ 1.45
VPS36-203ENST00000475375 SLC30A10Q6XR72 485 aa24.14■■□□□ 1.45
VPS36-203ENST00000475375 PI4K2BQ8TCG2 481 aa24.14■■□□□ 1.45
VPS36-203ENST00000475375 GPCPD1Q9NPB8 672 aa24.14■■□□□ 1.45
VPS36-203ENST00000475375 NOD1Q9Y239 953 aa24.14■■□□□ 1.45
VPS36-203ENST00000475375 TRANK1O15050 2925 aa24.14■■□□□ 1.45
VPS36-203ENST00000475375 TCF20Q9UGU0 1960 aaKnown RBP24.13■■□□□ 1.45
VPS36-203ENST00000475375 RFC2P35250 354 aa24.13■■□□□ 1.45
VPS36-203ENST00000475375 DIEXFQ68CQ4 756 aaKnown RBP24.13■■□□□ 1.45
VPS36-203ENST00000475375 OTUD7AQ8TE49 926 aaPredicted RBP24.13■■□□□ 1.45
VPS36-203ENST00000475375 SLC9A7Q96T83 725 aa24.13■■□□□ 1.45
VPS36-203ENST00000475375 MPHOSPH6Q99547 160 aaKnown RBP24.13■■□□□ 1.45
VPS36-203ENST00000475375 MTCH2Q9Y6C9 303 aa24.13■■□□□ 1.45
VPS36-203ENST00000475375 LCTP09848 1927 aa24.13■■□□□ 1.45
VPS36-203ENST00000475375 LOC102724159A0A0B4J2E5 919 aa24.12■■□□□ 1.45
VPS36-203ENST00000475375 PWP2Q15269 919 aaKnown RBP24.12■■□□□ 1.45
VPS36-203ENST00000475375 RRP12Q5JTH9 1297 aaKnown RBP24.12■■□□□ 1.45
VPS36-203ENST00000475375 RNF207Q6ZRF8 634 aa24.12■■□□□ 1.45
VPS36-203ENST00000475375 ARNTL2Q8WYA1 636 aa24.12■■□□□ 1.45
VPS36-203ENST00000475375 FAM122AQ96E09 287 aa24.12■■□□□ 1.45
VPS36-203ENST00000475375 C1QTNF1Q9BXJ1 281 aa24.12■■□□□ 1.45
VPS36-203ENST00000475375 RBM47A0AV96 593 aaKnown RBP24.11■■□□□ 1.45
VPS36-203ENST00000475375 KIF28PB7ZC32 967 aa24.11■■□□□ 1.45
VPS36-203ENST00000475375 FOXP2O15409 715 aa24.11■■□□□ 1.45
VPS36-203ENST00000475375 BTNL9Q6UXG8 535 aa24.11■■□□□ 1.45
VPS36-203ENST00000475375 PRRC2BQ5JSZ5 2229 aaKnown RBP24.11■■□□□ 1.45
VPS36-203ENST00000475375 EPOPA6NHQ4 379 aa24.1■■□□□ 1.45
VPS36-203ENST00000475375 NKRFO15226 690 aaKnown RBP eCLIP24.1■■□□□ 1.45
VPS36-203ENST00000475375 ORC4O43929 436 aa24.1■■□□□ 1.45
VPS36-203ENST00000475375 KPNA6O60684 536 aa24.1■■□□□ 1.45
VPS36-203ENST00000475375 TOP1P11387 765 aaKnown RBP24.1■■□□□ 1.45
VPS36-203ENST00000475375 PLA2G5P39877 138 aa24.1■■□□□ 1.45
VPS36-203ENST00000475375 BFSP2Q13515 415 aa24.1■■□□□ 1.45
VPS36-203ENST00000475375 VPS53Q5VIR6 699 aa24.1■■□□□ 1.45
VPS36-203ENST00000475375 KRT40Q6A162 431 aa24.1■■□□□ 1.45
VPS36-203ENST00000475375 NFRKBQ6P4R8 1299 aa24.1■■□□□ 1.45
VPS36-203ENST00000475375 PHOSPHO2Q8TCD6 241 aa24.1■■□□□ 1.45
VPS36-203ENST00000475375 SCFD2Q8WU76 684 aa24.1■■□□□ 1.45
VPS36-203ENST00000475375 COPS5Q92905 334 aa24.1■■□□□ 1.45
VPS36-203ENST00000475375 ANAPC4Q9UJX5 808 aa24.1■■□□□ 1.45
VPS36-203ENST00000475375 SCN5AQ14524 2016 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms