RNA–Protein interactions for RNA: ENST00000474256.1

CDPF1-205, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 3

Gene CDPF1, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-205ENST00000474256 RAG1P15918 1043 aa18.47■□□□□ 0.55
CDPF1-205ENST00000474256 PTGS1P23219 599 aa18.47■□□□□ 0.55
CDPF1-205ENST00000474256 PTH1RQ03431 593 aa18.47■□□□□ 0.55
CDPF1-205ENST00000474256 SEC23AQ15436 765 aa18.47■□□□□ 0.55
CDPF1-205ENST00000474256 CDC37Q16543 378 aaPredicted RBP18.47■□□□□ 0.55
CDPF1-205ENST00000474256 FSCN1Q16658 493 aaKnown RBP18.47■□□□□ 0.55
CDPF1-205ENST00000474256 KIAA1211Q6ZU35 1233 aa18.47■□□□□ 0.55
CDPF1-205ENST00000474256 Q7L0L9 218 aa18.47■□□□□ 0.55
CDPF1-205ENST00000474256 DNERQ8NFT8 737 aa18.47■□□□□ 0.55
CDPF1-205ENST00000474256 VTI1AQ96AJ9 217 aa18.47■□□□□ 0.55
CDPF1-205ENST00000474256 AP5M1Q9H0R1 490 aa18.47■□□□□ 0.55
CDPF1-205ENST00000474256 TBX21Q9UL17 535 aa18.47■□□□□ 0.55
CDPF1-205ENST00000474256 MCM3APO60318 1980 aa18.47■□□□□ 0.55
CDPF1-205ENST00000474256 RBM47A0AV96 593 aaKnown RBP18.46■□□□□ 0.55
CDPF1-205ENST00000474256 SGSM2O43147 1006 aa18.46■□□□□ 0.55
CDPF1-205ENST00000474256 CABYRO75952 493 aa18.46■□□□□ 0.55
CDPF1-205ENST00000474256 CYP21A2P08686 494 aa18.46■□□□□ 0.55
CDPF1-205ENST00000474256 PARP1P09874 1014 aaKnown RBP18.46■□□□□ 0.55
CDPF1-205ENST00000474256 EDNRBP24530 442 aa18.46■□□□□ 0.55
CDPF1-205ENST00000474256 USH1GQ495M9 461 aa18.46■□□□□ 0.55
CDPF1-205ENST00000474256 DUSP28Q4G0W2 176 aa18.46■□□□□ 0.55
CDPF1-205ENST00000474256 IFIT1BQ5T764 474 aaKnown RBP18.46■□□□□ 0.55
CDPF1-205ENST00000474256 CXCL17Q6UXB2 119 aa18.46■□□□□ 0.55
CDPF1-205ENST00000474256 CYB5R4Q7L1T6 521 aa18.46■□□□□ 0.55
CDPF1-205ENST00000474256 FAM126BQ8IXS8 530 aa18.46■□□□□ 0.55
CDPF1-205ENST00000474256 SLC43A3Q8NBI5 491 aa18.46■□□□□ 0.55
CDPF1-205ENST00000474256 U3KPZ7 1027 aaPredicted RBP18.46■□□□□ 0.55
CDPF1-205ENST00000474256 TIMP1P01033 207 aa18.45■□□□□ 0.54
CDPF1-205ENST00000474256 EPHB4P54760 987 aa18.45■□□□□ 0.54
CDPF1-205ENST00000474256 WDR11Q9BZH6 1224 aa18.45■□□□□ 0.54
CDPF1-205ENST00000474256 MTMR10Q9NXD2 777 aa18.45■□□□□ 0.54
CDPF1-205ENST00000474256 LRRC37A2A6NM11 1700 aa18.45■□□□□ 0.54
CDPF1-205ENST00000474256 ABCB11O95342 1321 aa18.45■□□□□ 0.54
CDPF1-205ENST00000474256 LCTP09848 1927 aa18.45■□□□□ 0.54
CDPF1-205ENST00000474256 ZEB2O60315 1214 aa18.44■□□□□ 0.54
CDPF1-205ENST00000474256 CD4P01730 458 aa18.44■□□□□ 0.54
CDPF1-205ENST00000474256 FPGSQ05932 587 aa18.44■□□□□ 0.54
CDPF1-205ENST00000474256 TRDNQ13061 729 aa18.44■□□□□ 0.54
CDPF1-205ENST00000474256 QRICH1Q2TAL8 776 aa18.44■□□□□ 0.54
CDPF1-205ENST00000474256 FAM109BQ6ICB4 259 aaPredicted RBP18.44■□□□□ 0.54
CDPF1-205ENST00000474256 MPHOSPH6Q99547 160 aaKnown RBP18.44■□□□□ 0.54
CDPF1-205ENST00000474256 JMJD4Q9H9V9 463 aa18.44■□□□□ 0.54
CDPF1-205ENST00000474256 PDE4DQ08499 809 aa18.43■□□□□ 0.54
CDPF1-205ENST00000474256 MFSD5Q6N075 450 aa18.43■□□□□ 0.54
CDPF1-205ENST00000474256 STAG2Q8N3U4 1231 aa18.43■□□□□ 0.54
CDPF1-205ENST00000474256 TBC1D5Q92609 795 aa18.43■□□□□ 0.54
CDPF1-205ENST00000474256 MAP4K1Q92918 833 aa18.43■□□□□ 0.54
CDPF1-205ENST00000474256 SEZ6LQ9BYH1 1024 aa18.43■□□□□ 0.54
CDPF1-205ENST00000474256 GRIN2DO15399 1336 aa18.43■□□□□ 0.54
CDPF1-205ENST00000474256 B4DLN1 442 aa18.42■□□□□ 0.54
CDPF1-205ENST00000474256 TLR3O15455 904 aaKnown RBP18.42■□□□□ 0.54
CDPF1-205ENST00000474256 MRPL12P52815 198 aaKnown RBP18.42■□□□□ 0.54
CDPF1-205ENST00000474256 ITGA7Q13683 1181 aa18.42■□□□□ 0.54
CDPF1-205ENST00000474256 FBXO11Q86XK2 927 aa18.42■□□□□ 0.54
CDPF1-205ENST00000474256 MCF2L2Q86YR7 1114 aa18.42■□□□□ 0.54
CDPF1-205ENST00000474256 SYTL5Q8TDW5 730 aaPredicted RBP18.42■□□□□ 0.54
CDPF1-205ENST00000474256 MTMR8Q96EF0 704 aa18.42■□□□□ 0.54
CDPF1-205ENST00000474256 VAT1LQ9HCJ6 419 aa18.42■□□□□ 0.54
CDPF1-205ENST00000474256 MAD2L2Q9UI95 211 aa18.42■□□□□ 0.54
CDPF1-205ENST00000474256 TAF6LQ9Y6J9 622 aa18.42■□□□□ 0.54
CDPF1-205ENST00000474256 PALM3A6NDB9 673 aaPredicted RBP18.41■□□□□ 0.54
CDPF1-205ENST00000474256 KLRF2D3W0D1 207 aa18.41■□□□□ 0.54
CDPF1-205ENST00000474256 E7EWF7 191 aa18.41■□□□□ 0.54
CDPF1-205ENST00000474256 NKRFO15226 690 aaKnown RBP eCLIP18.41■□□□□ 0.54
CDPF1-205ENST00000474256 DHX16O60231 1041 aaKnown RBP18.41■□□□□ 0.54
CDPF1-205ENST00000474256 SMAD3P84022 425 aaKnown RBP18.41■□□□□ 0.54
CDPF1-205ENST00000474256 STOX1Q6ZVD7 989 aa18.41■□□□□ 0.54
CDPF1-205ENST00000474256 SCFD2Q8WU76 684 aa18.41■□□□□ 0.54
CDPF1-205ENST00000474256 COL20A1Q9P218 1284 aa18.41■□□□□ 0.54
CDPF1-205ENST00000474256 MRPL11Q9Y3B7 192 aaKnown RBP18.41■□□□□ 0.54
CDPF1-205ENST00000474256 IFIT3O14879 490 aaKnown RBP18.4■□□□□ 0.54
CDPF1-205ENST00000474256 PPP2R5BQ15173 497 aa18.4■□□□□ 0.54
CDPF1-205ENST00000474256 RALYLQ86SE5 291 aaKnown RBP18.4■□□□□ 0.54
CDPF1-205ENST00000474256 NCOA7Q8NI08 942 aa18.4■□□□□ 0.54
CDPF1-205ENST00000474256 RNPC3Q96LT9 517 aaKnown RBP18.4■□□□□ 0.54
CDPF1-205ENST00000474256 TAAR1Q96RJ0 339 aa18.4■□□□□ 0.54
CDPF1-205ENST00000474256 AMNQ9BXJ7 453 aa18.4■□□□□ 0.54
CDPF1-205ENST00000474256 STXBP5LQ9Y2K9 1186 aa18.4■□□□□ 0.54
CDPF1-205ENST00000474256 CPT1AP50416 773 aa18.39■□□□□ 0.53
CDPF1-205ENST00000474256 PSMC6P62333 389 aa18.39■□□□□ 0.53
CDPF1-205ENST00000474256 PURAQ00577 322 aaKnown RBP18.39■□□□□ 0.53
CDPF1-205ENST00000474256 GHRHRQ02643 423 aa18.39■□□□□ 0.53
CDPF1-205ENST00000474256 GRM4Q14833 912 aa18.39■□□□□ 0.53
CDPF1-205ENST00000474256 C16orf59Q7L2K0 433 aa18.39■□□□□ 0.53
CDPF1-205ENST00000474256 OR6J1Q8NGC5 347 aa18.39■□□□□ 0.53
CDPF1-205ENST00000474256 NSUN6Q8TEA1 469 aaKnown RBP18.39■□□□□ 0.53
CDPF1-205ENST00000474256 SENP2Q9HC62 589 aa18.39■□□□□ 0.53
CDPF1-205ENST00000474256 POLR3EQ9NVU0 708 aa18.39■□□□□ 0.53
CDPF1-205ENST00000474256 ERICH2A1L162 156 aa18.38■□□□□ 0.53
CDPF1-205ENST00000474256 OPLAHO14841 1288 aa18.38■□□□□ 0.53
CDPF1-205ENST00000474256 ZBTB5O15062 677 aa18.38■□□□□ 0.53
CDPF1-205ENST00000474256 B4GALT4O60513 344 aa18.38■□□□□ 0.53
CDPF1-205ENST00000474256 PPP1R11O60927 126 aaPredicted RBP18.38■□□□□ 0.53
CDPF1-205ENST00000474256 TXNP10599 105 aaKnown RBP18.38■□□□□ 0.53
CDPF1-205ENST00000474256 CSF2RAP15509 400 aa18.38■□□□□ 0.53
CDPF1-205ENST00000474256 ANTXR2P58335 489 aa18.38■□□□□ 0.53
CDPF1-205ENST00000474256 TROAPQ12815 778 aa18.38■□□□□ 0.53
CDPF1-205ENST00000474256 PPIGQ13427 754 aaKnown RBP eCLIP18.38■□□□□ 0.53
CDPF1-205ENST00000474256 TTLL4Q14679 1199 aa18.38■□□□□ 0.53
CDPF1-205ENST00000474256 SLC35G1Q2M3R5 365 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms