RNA–Protein interactions for RNA: ENST00000473782.1

HPS4-210, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-210ENST00000473782 DEFB103AP81534 67 aa19.37■□□□□ 0.69
HPS4-210ENST00000473782 RPAP2Q8IXW5 612 aaPredicted RBP19.37■□□□□ 0.69
HPS4-210ENST00000473782 LRRC47Q8N1G4 583 aaKnown RBP19.37■□□□□ 0.69
HPS4-210ENST00000473782 TRERF1Q96PN7 1200 aa19.37■□□□□ 0.69
HPS4-210ENST00000473782 PHOX2BQ99453 314 aa19.37■□□□□ 0.69
HPS4-210ENST00000473782 FTOQ9C0B1 505 aaKnown RBP eCLIP19.37■□□□□ 0.69
HPS4-210ENST00000473782 BOLA2Q9H3K6 86 aa19.37■□□□□ 0.69
HPS4-210ENST00000473782 VTA1Q9NP79 307 aa19.37■□□□□ 0.69
HPS4-210ENST00000473782 ARPP21Q9UBL0 812 aaPredicted RBP19.37■□□□□ 0.69
HPS4-210ENST00000473782 GSG1L2A8MUP6 293 aa19.36■□□□□ 0.69
HPS4-210ENST00000473782 ERVK-21P61565 698 aa19.36■□□□□ 0.69
HPS4-210ENST00000473782 STRBPQ96SI9 672 aaKnown RBP19.36■□□□□ 0.69
HPS4-210ENST00000473782 KCNH6Q9H252 994 aa19.36■□□□□ 0.69
HPS4-210ENST00000473782 POLR3EQ9NVU0 708 aa19.36■□□□□ 0.69
HPS4-210ENST00000473782 SYNPO2Q9UMS6 1093 aa19.36■□□□□ 0.69
HPS4-210ENST00000473782 TANC1Q9C0D5 1861 aa19.36■□□□□ 0.69
HPS4-210ENST00000473782 RBM47A0AV96 593 aaKnown RBP19.35■□□□□ 0.69
HPS4-210ENST00000473782 TMEM232C9JQI7 657 aa19.35■□□□□ 0.69
HPS4-210ENST00000473782 MYL3P08590 195 aa19.35■□□□□ 0.69
HPS4-210ENST00000473782 FDX1P10109 184 aa19.35■□□□□ 0.69
HPS4-210ENST00000473782 BMP3P12645 472 aa19.35■□□□□ 0.69
HPS4-210ENST00000473782 SSTR3P32745 418 aaPredicted RBP19.35■□□□□ 0.69
HPS4-210ENST00000473782 SNAP25P60880 206 aa19.35■□□□□ 0.69
HPS4-210ENST00000473782 SLFN13Q68D06 897 aa19.35■□□□□ 0.69
HPS4-210ENST00000473782 PTCRAQ6ISU1 281 aaPredicted RBP19.35■□□□□ 0.69
HPS4-210ENST00000473782 NFRKBQ6P4R8 1299 aa19.35■□□□□ 0.69
HPS4-210ENST00000473782 NEK9Q8TD19 979 aa19.35■□□□□ 0.69
HPS4-210ENST00000473782 MTG1Q9BT17 334 aaPredicted RBP19.35■□□□□ 0.69
HPS4-210ENST00000473782 MTUS1Q9ULD2 1270 aa19.35■□□□□ 0.69
HPS4-210ENST00000473782 CFAP54Q96N23 3096 aa19.34■□□□□ 0.69
HPS4-210ENST00000473782 LINC01553A4QN01 128 aa19.34■□□□□ 0.69
HPS4-210ENST00000473782 DCXO43602 365 aa19.34■□□□□ 0.69
HPS4-210ENST00000473782 TKFCQ3LXA3 575 aa19.34■□□□□ 0.69
HPS4-210ENST00000473782 HAUS7Q99871 368 aa19.34■□□□□ 0.69
HPS4-210ENST00000473782 WDR11Q9BZH6 1224 aa19.34■□□□□ 0.69
HPS4-210ENST00000473782 MKNK2Q9HBH9 465 aa19.34■□□□□ 0.69
HPS4-210ENST00000473782 C5orf42Q9H799 3197 aa19.34■□□□□ 0.69
HPS4-210ENST00000473782 MYH4Q9Y623 1939 aa19.33■□□□□ 0.69
HPS4-210ENST00000473782 PRDM1O75626 825 aa19.33■□□□□ 0.68
HPS4-210ENST00000473782 ALAS1P13196 640 aa19.33■□□□□ 0.68
HPS4-210ENST00000473782 ATP5JP18859 108 aa19.33■□□□□ 0.68
HPS4-210ENST00000473782 HFE2Q6ZVN8 426 aa19.33■□□□□ 0.68
HPS4-210ENST00000473782 ITPRIPQ8IWB1 547 aa19.33■□□□□ 0.68
HPS4-210ENST00000473782 CLASRPQ8N2M8 674 aaKnown RBP19.33■□□□□ 0.68
HPS4-210ENST00000473782 RETREG2Q8NC44 543 aa19.33■□□□□ 0.68
HPS4-210ENST00000473782 DDRGK1Q96HY6 314 aa19.33■□□□□ 0.68
HPS4-210ENST00000473782 C19orf67A6NJJ6 358 aa19.32■□□□□ 0.68
HPS4-210ENST00000473782 GJB5O95377 273 aa19.32■□□□□ 0.68
HPS4-210ENST00000473782 TTLL1O95922 423 aa19.32■□□□□ 0.68
HPS4-210ENST00000473782 STAT2P52630 851 aa19.32■□□□□ 0.68
HPS4-210ENST00000473782 FAM47CQ5HY64 1035 aa19.32■□□□□ 0.68
HPS4-210ENST00000473782 STAG1Q8WVM7 1258 aa19.32■□□□□ 0.68
HPS4-210ENST00000473782 DHX38Q92620 1227 aaKnown RBP19.32■□□□□ 0.68
HPS4-210ENST00000473782 TGS1Q96RS0 853 aaKnown RBP19.32■□□□□ 0.68
HPS4-210ENST00000473782 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.32■□□□□ 0.681e-6■■□□□ 12.5
HPS4-210ENST00000473782 EPB41L4AQ9HCS5 686 aaPredicted RBP19.32■□□□□ 0.68
HPS4-210ENST00000473782 MINDY4BA8MYZ0 360 aa19.31■□□□□ 0.68
HPS4-210ENST00000473782 NBNO60934 754 aa19.31■□□□□ 0.68
HPS4-210ENST00000473782 CXCL10P02778 98 aa19.31■□□□□ 0.68
HPS4-210ENST00000473782 IFIT2P09913 472 aaKnown RBP19.31■□□□□ 0.68
HPS4-210ENST00000473782 KCNJ6P48051 423 aa19.31■□□□□ 0.68
HPS4-210ENST00000473782 CPT1AP50416 773 aa19.31■□□□□ 0.68
HPS4-210ENST00000473782 ZP2Q05996 745 aa19.31■□□□□ 0.68
HPS4-210ENST00000473782 PTPN11Q06124 597 aaPredicted RBP19.31■□□□□ 0.68
HPS4-210ENST00000473782 BFSP2Q13515 415 aa19.31■□□□□ 0.68
HPS4-210ENST00000473782 CSPP1Q1MSJ5 1256 aa19.31■□□□□ 0.68
HPS4-210ENST00000473782 RASGRP2Q7LDG7 609 aa19.31■□□□□ 0.68
HPS4-210ENST00000473782 COPS5Q92905 334 aa19.31■□□□□ 0.68
HPS4-210ENST00000473782 RAD9AQ99638 391 aa19.31■□□□□ 0.68
HPS4-210ENST00000473782 ZNF316A6NFI3 1004 aaPredicted RBP19.3■□□□□ 0.68
HPS4-210ENST00000473782 A6NJR5 290 aa19.3■□□□□ 0.68
HPS4-210ENST00000473782 H3BQ06 376 aaPredicted RBP19.3■□□□□ 0.68
HPS4-210ENST00000473782 PLA2G6O60733 806 aa19.3■□□□□ 0.68
HPS4-210ENST00000473782 LRRFIP1Q32MZ4 808 aaKnown RBP19.3■□□□□ 0.68
HPS4-210ENST00000473782 HSP90AB4PQ58FF6 505 aa19.3■□□□□ 0.68
HPS4-210ENST00000473782 GIMAP6Q6P9H5 292 aa19.3■□□□□ 0.68
HPS4-210ENST00000473782 FAM160B2Q86V87 743 aa19.3■□□□□ 0.68
HPS4-210ENST00000473782 OR6J1Q8NGC5 347 aa19.3■□□□□ 0.68
HPS4-210ENST00000473782 CHMP4CQ96CF2 233 aa19.3■□□□□ 0.68
HPS4-210ENST00000473782 KIF1BPQ96EK5 621 aa19.3■□□□□ 0.68
HPS4-210ENST00000473782 GMCL1Q96IK5 515 aa19.3■□□□□ 0.68
HPS4-210ENST00000473782 PLIN4Q96Q06 1357 aa19.3■□□□□ 0.68
HPS4-210ENST00000473782 TRIP12Q14669 1992 aaPredicted RBP19.3■□□□□ 0.68
HPS4-210ENST00000473782 ALDH5A1P51649 535 aaPredicted RBP19.29■□□□□ 0.68
HPS4-210ENST00000473782 BAATQ14032 418 aaPredicted RBP19.29■□□□□ 0.68
HPS4-210ENST00000473782 COL19A1Q14993 1142 aa19.29■□□□□ 0.68
HPS4-210ENST00000473782 NSMFQ6X4W1 530 aa19.29■□□□□ 0.68
HPS4-210ENST00000473782 SIRT2Q8IXJ6 389 aa19.29■□□□□ 0.68
HPS4-210ENST00000473782 NEDD1Q8NHV4 660 aa19.29■□□□□ 0.68
HPS4-210ENST00000473782 CHURC1Q8WUH1 139 aa19.29■□□□□ 0.68
HPS4-210ENST00000473782 OSBP2Q969R2 916 aa19.29■□□□□ 0.68
HPS4-210ENST00000473782 C17orf80Q9BSJ5 609 aa19.29■□□□□ 0.68
HPS4-210ENST00000473782 ZBED2Q9BTP6 218 aa19.29■□□□□ 0.68
HPS4-210ENST00000473782 PRR12Q9ULL5 1215 aa19.29■□□□□ 0.68
HPS4-210ENST00000473782 SIP14410 1827 aa19.28■□□□□ 0.68
HPS4-210ENST00000473782 MCCP23508 829 aa19.28■□□□□ 0.68
HPS4-210ENST00000473782 RBL2Q08999 1139 aa19.28■□□□□ 0.68
HPS4-210ENST00000473782 MKRN4PQ13434 485 aaPredicted RBP19.28■□□□□ 0.68
HPS4-210ENST00000473782 GDF6Q6KF10 455 aaPredicted RBP19.28■□□□□ 0.68
HPS4-210ENST00000473782 CNKSR3Q6P9H4 555 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms