RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 STX17P56962 302 aa7.05□□□□□ -1.28
CLK1-210ENST00000473565 UBXN2AP68543 259 aa7.05□□□□□ -1.28
CLK1-210ENST00000473565 DPYDQ12882 1025 aa7.05□□□□□ -1.28
CLK1-210ENST00000473565 MORC3Q14149 939 aa7.05□□□□□ -1.28
CLK1-210ENST00000473565 ARID5BQ14865 1188 aa7.05□□□□□ -1.28
CLK1-210ENST00000473565 CALCRLQ16602 461 aa7.05□□□□□ -1.28
CLK1-210ENST00000473565 PPP1R18Q6NYC8 613 aa7.05□□□□□ -1.28
CLK1-210ENST00000473565 FCHSD1Q86WN1 690 aa7.05□□□□□ -1.28
CLK1-210ENST00000473565 FAM43AQ8N2R8 423 aa7.05□□□□□ -1.28
CLK1-210ENST00000473565 IQUBQ8NA54 791 aa7.05□□□□□ -1.28
CLK1-210ENST00000473565 ANO3Q9BYT9 981 aa7.05□□□□□ -1.28
CLK1-210ENST00000473565 DISC1Q9NRI5 854 aa7.05□□□□□ -1.28
CLK1-210ENST00000473565 GPRC5DQ9NZD1 345 aa7.05□□□□□ -1.28
CLK1-210ENST00000473565 MAPK8IP1Q9UQF2 711 aa7.05□□□□□ -1.28
CLK1-210ENST00000473565 MORC2Q9Y6X9 1032 aaPredicted RBP7.05□□□□□ -1.28
CLK1-210ENST00000473565 H7C1D1 291 aa7.04□□□□□ -1.28
CLK1-210ENST00000473565 CAVIN2O95810 425 aa7.04□□□□□ -1.28
CLK1-210ENST00000473565 PLCG1P19174 1290 aa7.04□□□□□ -1.28
CLK1-210ENST00000473565 TNFAIP1Q13829 316 aa7.04□□□□□ -1.28
CLK1-210ENST00000473565 CCDC144BQ3MJ40 725 aa7.04□□□□□ -1.28
CLK1-210ENST00000473565 CABP7Q86V35 215 aa7.04□□□□□ -1.28
CLK1-210ENST00000473565 ZSCAN30Q86W11 494 aa7.04□□□□□ -1.28
CLK1-210ENST00000473565 MTMR9Q96QG7 549 aa7.04□□□□□ -1.28
CLK1-210ENST00000473565 MMTAG2Q9BU76 263 aaKnown RBP7.04□□□□□ -1.28
CLK1-210ENST00000473565 FANCLQ9NW38 375 aa7.04□□□□□ -1.28
CLK1-210ENST00000473565 DDX25Q9UHL0 483 aaKnown RBP7.04□□□□□ -1.28
CLK1-210ENST00000473565 HOOK1Q9UJC3 728 aaKnown RBP7.04□□□□□ -1.28
CLK1-210ENST00000473565 SBF1O95248 1867 aa7.04□□□□□ -1.28
CLK1-210ENST00000473565 SMC2O95347 1197 aa7.04□□□□□ -1.28
CLK1-210ENST00000473565 CFBP00751 764 aa7.04□□□□□ -1.28
CLK1-210ENST00000473565 LMNB1P20700 586 aa7.04□□□□□ -1.28
CLK1-210ENST00000473565 TXLNAP40222 546 aa7.04□□□□□ -1.28
CLK1-210ENST00000473565 MAP3K10Q02779 954 aa7.04□□□□□ -1.28
CLK1-210ENST00000473565 LRMPQ12912 555 aa7.04□□□□□ -1.28
CLK1-210ENST00000473565 RRAGBQ5VZM2 374 aa7.04□□□□□ -1.28
CLK1-210ENST00000473565 BTNL9Q6UXG8 535 aa7.04□□□□□ -1.28
CLK1-210ENST00000473565 CCDC186Q7Z3E2 898 aa7.04□□□□□ -1.28
CLK1-210ENST00000473565 CYP2W1Q8TAV3 490 aa7.04□□□□□ -1.28
CLK1-210ENST00000473565 HAS1Q92839 578 aa7.04□□□□□ -1.28
CLK1-210ENST00000473565 KCNF1Q9H3M0 494 aa7.04□□□□□ -1.28
CLK1-210ENST00000473565 RNF181Q9P0P0 153 aa7.04□□□□□ -1.28
CLK1-210ENST00000473565 IFNKQ9P0W0 207 aa7.04□□□□□ -1.28
CLK1-210ENST00000473565 STAT3P40763 770 aa7.03□□□□□ -1.28
CLK1-210ENST00000473565 MTMR2Q13614 643 aa7.03□□□□□ -1.28
CLK1-210ENST00000473565 NT5DC1Q5TFE4 455 aa7.03□□□□□ -1.28
CLK1-210ENST00000473565 SPATA20Q8TB22 786 aa7.03□□□□□ -1.28
CLK1-210ENST00000473565 AGBL1Q96MI9 1066 aa7.03□□□□□ -1.28
CLK1-210ENST00000473565 WRNIP1Q96S55 665 aa7.03□□□□□ -1.28
CLK1-210ENST00000473565 SYT17Q9BSW7 474 aa7.03□□□□□ -1.28
CLK1-210ENST00000473565 ZKSCAN5Q9Y2L8 839 aa7.03□□□□□ -1.28
CLK1-210ENST00000473565 MARCH6O60337 910 aa7.03□□□□□ -1.28
CLK1-210ENST00000473565 MSNP26038 577 aaKnown RBP7.03□□□□□ -1.28
CLK1-210ENST00000473565 PRPHP41219 470 aa7.03□□□□□ -1.28
CLK1-210ENST00000473565 MYL5Q02045 173 aa7.03□□□□□ -1.28
CLK1-210ENST00000473565 SPP2Q13103 211 aa7.03□□□□□ -1.28
CLK1-210ENST00000473565 KANK3Q6NY19 840 aa7.03□□□□□ -1.28
CLK1-210ENST00000473565 FILIP1Q7Z7B0 1213 aa7.03□□□□□ -1.28
CLK1-210ENST00000473565 CPXCR1Q8N123 301 aa7.03□□□□□ -1.28
CLK1-210ENST00000473565 FAM177A1Q8N128 213 aaPredicted RBP7.03□□□□□ -1.28
CLK1-210ENST00000473565 BPIFA3Q9BQP9 254 aa7.03□□□□□ -1.28
CLK1-210ENST00000473565 TANGO6Q9C0B7 1094 aa7.03□□□□□ -1.28
CLK1-210ENST00000473565 XPO4Q9C0E2 1151 aaKnown RBP7.03□□□□□ -1.28
CLK1-210ENST00000473565 HOMER2Q9NSB8 354 aa7.03□□□□□ -1.28
CLK1-210ENST00000473565 LRWD1Q9UFC0 647 aa7.03□□□□□ -1.28
CLK1-210ENST00000473565 GDAQ9Y2T3 454 aa7.03□□□□□ -1.28
CLK1-210ENST00000473565 LAD1O00515 517 aa7.03□□□□□ -1.28
CLK1-210ENST00000473565 ARHGAP4P98171 946 aa7.03□□□□□ -1.28
CLK1-210ENST00000473565 ECM1Q16610 540 aa7.03□□□□□ -1.28
CLK1-210ENST00000473565 PRR16Q569H4 304 aa7.03□□□□□ -1.28
CLK1-210ENST00000473565 KCNK18Q7Z418 384 aa7.03□□□□□ -1.28
CLK1-210ENST00000473565 HPS3Q969F9 1004 aa7.03□□□□□ -1.28
CLK1-210ENST00000473565 WNK4Q96J92 1243 aa7.03□□□□□ -1.28
CLK1-210ENST00000473565 SAMSN1Q9NSI8 373 aaKnown RBP7.03□□□□□ -1.28
CLK1-210ENST00000473565 FAM86B1E9PN63 330 aa7.02□□□□□ -1.29
CLK1-210ENST00000473565 FAM86B2P0C5J1 330 aa7.02□□□□□ -1.29
CLK1-210ENST00000473565 SARM1Q6SZW1 724 aa7.02□□□□□ -1.29
CLK1-210ENST00000473565 ELOA2Q8IYF1 753 aaPredicted RBP7.02□□□□□ -1.29
CLK1-210ENST00000473565 GPC2Q8N158 579 aa7.02□□□□□ -1.29
CLK1-210ENST00000473565 IGSF22Q8N9C0 903 aa7.02□□□□□ -1.29
CLK1-210ENST00000473565 PNMA5Q96PV4 448 aa7.02□□□□□ -1.29
CLK1-210ENST00000473565 CCSER1Q9C0I3 900 aa7.02□□□□□ -1.29
CLK1-210ENST00000473565 PYCARDQ9ULZ3 195 aa7.02□□□□□ -1.29
CLK1-210ENST00000473565 NFE2L3Q9Y4A8 694 aa7.02□□□□□ -1.29
CLK1-210ENST00000473565 DICER1Q9UPY3 1922 aaKnown RBP7.02□□□□□ -1.29
CLK1-210ENST00000473565 SPDYE3A6NKU9 549 aa7.02□□□□□ -1.29
CLK1-210ENST00000473565 ADM5C9JUS6 153 aa7.02□□□□□ -1.29
CLK1-210ENST00000473565 GTPBP6O43824 516 aaPredicted RBP7.02□□□□□ -1.29
CLK1-210ENST00000473565 RPN1P04843 607 aaKnown RBP7.02□□□□□ -1.29
CLK1-210ENST00000473565 FANCCQ00597 558 aa7.02□□□□□ -1.29
CLK1-210ENST00000473565 GRB10Q13322 594 aa7.02□□□□□ -1.29
CLK1-210ENST00000473565 LDHDQ86WU2 507 aa7.02□□□□□ -1.29
CLK1-210ENST00000473565 SNX29Q8TEQ0 813 aa7.02□□□□□ -1.29
CLK1-210ENST00000473565 CHURC1Q8WUH1 139 aa7.02□□□□□ -1.29
CLK1-210ENST00000473565 RANBP17Q9H2T7 1088 aaKnown RBP7.02□□□□□ -1.29
CLK1-210ENST00000473565 EMILIN3Q9NT22 766 aa7.02□□□□□ -1.29
CLK1-210ENST00000473565 CTNND2Q9UQB3 1225 aa7.02□□□□□ -1.29
CLK1-210ENST00000473565 SSC5DA1L4H1 1573 aa7.02□□□□□ -1.29
CLK1-210ENST00000473565 SMTNL1A8MU46 457 aa7.01□□□□□ -1.29
CLK1-210ENST00000473565 PPP1R3GB7ZBB8 358 aa7.01□□□□□ -1.29
CLK1-210ENST00000473565 IKBKBO14920 756 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms