RNA–Protein interactions for RNA: ENST00000472815.5

HIF3A-206, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-206ENST00000472815 FUCA2Q9BTY2 467 aa16.56■□□□□ 0.24
HIF3A-206ENST00000472815 FBXO28Q9NVF7 368 aa16.56■□□□□ 0.24
HIF3A-206ENST00000472815 PPP1R9AQ9ULJ8 1098 aa16.56■□□□□ 0.24
HIF3A-206ENST00000472815 CLEC11AQ9Y240 323 aa16.56■□□□□ 0.24
HIF3A-206ENST00000472815 GCOM1H8Y6P7 765 aaPredicted RBP16.56■□□□□ 0.24
HIF3A-206ENST00000472815 MEIS2O14770 477 aa16.56■□□□□ 0.24
HIF3A-206ENST00000472815 POLR2DO15514 142 aaKnown RBP16.56■□□□□ 0.24
HIF3A-206ENST00000472815 POLR2MP0CAP2 368 aa16.56■□□□□ 0.24
HIF3A-206ENST00000472815 GRIN1Q05586 938 aa16.56■□□□□ 0.24
HIF3A-206ENST00000472815 VGLL4Q14135 290 aa16.56■□□□□ 0.24
HIF3A-206ENST00000472815 TTLL12Q14166 644 aaPredicted RBP16.56■□□□□ 0.24
HIF3A-206ENST00000472815 CALCRLQ16602 461 aa16.56■□□□□ 0.24
HIF3A-206ENST00000472815 STX1AQ16623 288 aa16.56■□□□□ 0.24
HIF3A-206ENST00000472815 SPECC1Q5M775 1068 aa16.56■□□□□ 0.24
HIF3A-206ENST00000472815 ARMC9Q7Z3E5 817 aa16.56■□□□□ 0.24
HIF3A-206ENST00000472815 MCF2L2Q86YR7 1114 aa16.56■□□□□ 0.24
HIF3A-206ENST00000472815 CEP57L1Q8IYX8 460 aa16.56■□□□□ 0.24
HIF3A-206ENST00000472815 SYMPKQ92797 1274 aaKnown RBP16.56■□□□□ 0.24
HIF3A-206ENST00000472815 KIAA1468Q9P260 1216 aa16.56■□□□□ 0.24
HIF3A-206ENST00000472815 CCPG1Q9ULG6 757 aa16.56■□□□□ 0.24
HIF3A-206ENST00000472815 AFG3L2Q9Y4W6 797 aa16.56■□□□□ 0.24
HIF3A-206ENST00000472815 MRVI1Q9Y6F6 885 aa16.56■□□□□ 0.24
HIF3A-206ENST00000472815 OTOFQ9HC10 1997 aa16.55■□□□□ 0.24
HIF3A-206ENST00000472815 HMGCS2P54868 508 aa16.55■□□□□ 0.24
HIF3A-206ENST00000472815 RBSNQ9H1K0 784 aa16.55■□□□□ 0.24
HIF3A-206ENST00000472815 SLC38A10Q9HBR0 1119 aa16.55■□□□□ 0.24
HIF3A-206ENST00000472815 ANO10Q9NW15 660 aa16.55■□□□□ 0.24
HIF3A-206ENST00000472815 CCDC39Q9UFE4 941 aa16.55■□□□□ 0.24
HIF3A-206ENST00000472815 DDX25Q9UHL0 483 aaKnown RBP16.55■□□□□ 0.24
HIF3A-206ENST00000472815 PAPPA2Q9BXP8 1791 aa16.55■□□□□ 0.24
HIF3A-206ENST00000472815 PARP14Q460N5 1801 aa16.54■□□□□ 0.24
HIF3A-206ENST00000472815 MYPNQ86TC9 1320 aa16.54■□□□□ 0.24
HIF3A-206ENST00000472815 MARCH6O60337 910 aa16.54■□□□□ 0.24
HIF3A-206ENST00000472815 UBA7P41226 1012 aa16.54■□□□□ 0.24
HIF3A-206ENST00000472815 UVSSAQ2YD98 709 aa16.54■□□□□ 0.24
HIF3A-206ENST00000472815 SH3D19Q5HYK7 790 aa16.54■□□□□ 0.24
HIF3A-206ENST00000472815 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.54■□□□□ 0.24
HIF3A-206ENST00000472815 IQUBQ8NA54 791 aa16.54■□□□□ 0.24
HIF3A-206ENST00000472815 ZNF784Q8NCA9 323 aaPredicted RBP16.54■□□□□ 0.24
HIF3A-206ENST00000472815 NAT10Q9H0A0 1025 aaKnown RBP16.54■□□□□ 0.24
HIF3A-206ENST00000472815 MAP3K20Q9NYL2 800 aaKnown RBP16.54■□□□□ 0.24
HIF3A-206ENST00000472815 FZD1Q9UP38 647 aa16.54■□□□□ 0.24
HIF3A-206ENST00000472815 RABGAP1Q9Y3P9 1069 aa16.54■□□□□ 0.24
HIF3A-206ENST00000472815 SNCAIPQ9Y6H5 919 aa16.54■□□□□ 0.24
HIF3A-206ENST00000472815 TRPM7Q96QT4 1865 aa16.54■□□□□ 0.24
HIF3A-206ENST00000472815 CFBP00751 764 aa16.53■□□□□ 0.24
HIF3A-206ENST00000472815 XRCC6P12956 609 aaKnown RBP eCLIP16.53■□□□□ 0.24
HIF3A-206ENST00000472815 OAZ1P54368 228 aa16.53■□□□□ 0.24
HIF3A-206ENST00000472815 PPATQ06203 517 aa16.53■□□□□ 0.24
HIF3A-206ENST00000472815 ERO1BQ86YB8 467 aa16.53■□□□□ 0.24
HIF3A-206ENST00000472815 RASSF8Q8NHQ8 419 aa16.53■□□□□ 0.24
HIF3A-206ENST00000472815 TMEM60Q9H2L4 133 aa16.53■□□□□ 0.24
HIF3A-206ENST00000472815 RBBP6Q7Z6E9 1792 aaKnown RBP16.53■□□□□ 0.24
HIF3A-206ENST00000472815 UNCXA6NJT0 531 aa16.53■□□□□ 0.24
HIF3A-206ENST00000472815 POTEIP0CG38 1075 aa16.53■□□□□ 0.24
HIF3A-206ENST00000472815 POTEJP0CG39 1038 aa16.53■□□□□ 0.24
HIF3A-206ENST00000472815 SREBF1P36956 1147 aa16.53■□□□□ 0.24
HIF3A-206ENST00000472815 COG2Q14746 738 aa16.53■□□□□ 0.24
HIF3A-206ENST00000472815 LONRF3Q496Y0 759 aa16.53■□□□□ 0.24
HIF3A-206ENST00000472815 POTEDQ86YR6 584 aa16.53■□□□□ 0.24
HIF3A-206ENST00000472815 PDILTQ8N807 584 aa16.53■□□□□ 0.24
HIF3A-206ENST00000472815 FAM200AQ8TCP9 573 aa16.53■□□□□ 0.24
HIF3A-206ENST00000472815 EPSTI1Q96J88 318 aa16.53■□□□□ 0.24
HIF3A-206ENST00000472815 HOXC10Q9NYD6 342 aa16.53■□□□□ 0.24
HIF3A-206ENST00000472815 CYP3A7-CYP3A51PA0A087WV96 503 aa16.52■□□□□ 0.24
HIF3A-206ENST00000472815 KIF3CO14782 793 aa16.52■□□□□ 0.24
HIF3A-206ENST00000472815 SLFN14P0C7P3 912 aa16.52■□□□□ 0.24
HIF3A-206ENST00000472815 CYP3A7P24462 503 aa16.52■□□□□ 0.24
HIF3A-206ENST00000472815 ARHGAP4P98171 946 aa16.52■□□□□ 0.24
HIF3A-206ENST00000472815 SLFN12Q8IYM2 578 aa16.52■□□□□ 0.24
HIF3A-206ENST00000472815 CCSER1Q9C0I3 900 aa16.52■□□□□ 0.24
HIF3A-206ENST00000472815 PTPRFP10586 1907 aa16.52■□□□□ 0.23
HIF3A-206ENST00000472815 OPLAHO14841 1288 aa16.51■□□□□ 0.23
HIF3A-206ENST00000472815 SMC2O95347 1197 aa16.51■□□□□ 0.23
HIF3A-206ENST00000472815 TDP2O95551 362 aa16.51■□□□□ 0.23
HIF3A-206ENST00000472815 FXR2P51116 673 aaKnown RBP eCLIP16.51■□□□□ 0.23
HIF3A-206ENST00000472815 PDIA5Q14554 519 aa16.51■□□□□ 0.23
HIF3A-206ENST00000472815 POSTNQ15063 836 aa16.51■□□□□ 0.23
HIF3A-206ENST00000472815 ANO6Q4KMQ2 910 aa16.51■□□□□ 0.23
HIF3A-206ENST00000472815 RNF214Q8ND24 703 aa16.51■□□□□ 0.23
HIF3A-206ENST00000472815 DHX58Q96C10 678 aa16.51■□□□□ 0.23
HIF3A-206ENST00000472815 MTMR9Q96QG7 549 aa16.51■□□□□ 0.23
HIF3A-206ENST00000472815 MAF1Q9H063 256 aa16.51■□□□□ 0.23
HIF3A-206ENST00000472815 CUEDC2Q9H467 287 aa16.51■□□□□ 0.23
HIF3A-206ENST00000472815 SERTAD1Q9UHV2 236 aa16.51■□□□□ 0.23
HIF3A-206ENST00000472815 VWA5AO00534 786 aa16.5■□□□□ 0.23
HIF3A-206ENST00000472815 CXCL11O14625 94 aa16.5■□□□□ 0.23
HIF3A-206ENST00000472815 TBX3O15119 743 aa16.5■□□□□ 0.23
HIF3A-206ENST00000472815 CYP3A4P08684 503 aa16.5■□□□□ 0.23
HIF3A-206ENST00000472815 DSG3P32926 999 aa16.5■□□□□ 0.23
HIF3A-206ENST00000472815 ZNF76P36508 570 aa16.5■□□□□ 0.23
HIF3A-206ENST00000472815 IL17AQ16552 155 aa16.5■□□□□ 0.23
HIF3A-206ENST00000472815 CHADLQ6NUI6 762 aa16.5■□□□□ 0.23
HIF3A-206ENST00000472815 CATSPERGQ6ZRH7 1159 aa16.5■□□□□ 0.23
HIF3A-206ENST00000472815 USP49Q70CQ1 688 aa16.5■□□□□ 0.23
HIF3A-206ENST00000472815 CPXCR1Q8N123 301 aa16.5■□□□□ 0.23
HIF3A-206ENST00000472815 PROCA1Q8NCQ7 364 aaPredicted RBP16.5■□□□□ 0.23
HIF3A-206ENST00000472815 AGBL1Q96MI9 1066 aa16.5■□□□□ 0.23
HIF3A-206ENST00000472815 PANK2Q9BZ23 570 aa16.5■□□□□ 0.23
HIF3A-206ENST00000472815 MAGEF1Q9HAY2 307 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms