RNA–Protein interactions for RNA: ENST00000472397.5

SCAMP3-205, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 3

Gene SCAMP3, Length 1,030 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-205ENST00000472397 ARHGEF15O94989 841 aa11.96□□□□□ -0.49
SCAMP3-205ENST00000472397 ZFYP08048 801 aaPredicted RBP11.96□□□□□ -0.49
SCAMP3-205ENST00000472397 SLC3A2P08195 630 aaKnown RBP11.96□□□□□ -0.49
SCAMP3-205ENST00000472397 HAND2P61296 217 aa11.96□□□□□ -0.49
SCAMP3-205ENST00000472397 ZMYM1Q5SVZ6 1142 aa11.96□□□□□ -0.49
SCAMP3-205ENST00000472397 PPP2R2DQ66LE6 453 aa11.96□□□□□ -0.49
SCAMP3-205ENST00000472397 SLC30A10Q6XR72 485 aa11.96□□□□□ -0.49
SCAMP3-205ENST00000472397 SPRED2Q7Z698 418 aa11.96□□□□□ -0.49
SCAMP3-205ENST00000472397 SLC43A3Q8NBI5 491 aa11.96□□□□□ -0.49
SCAMP3-205ENST00000472397 OR6J1Q8NGC5 347 aa11.96□□□□□ -0.49
SCAMP3-205ENST00000472397 GMCL1Q96IK5 515 aa11.96□□□□□ -0.49
SCAMP3-205ENST00000472397 ASB2Q96Q27 587 aa11.96□□□□□ -0.49
SCAMP3-205ENST00000472397 CHMP4BQ9H444 224 aaKnown RBP11.96□□□□□ -0.49
SCAMP3-205ENST00000472397 SLC4A7Q9Y6M7 1214 aa11.96□□□□□ -0.49
SCAMP3-205ENST00000472397 TTC28Q96AY4 2481 aa11.95□□□□□ -0.5
SCAMP3-205ENST00000472397 EPOPA6NHQ4 379 aa11.95□□□□□ -0.5
SCAMP3-205ENST00000472397 ZEB2O60315 1214 aa11.95□□□□□ -0.5
SCAMP3-205ENST00000472397 KCNQ1P51787 676 aa11.95□□□□□ -0.5
SCAMP3-205ENST00000472397 RAB30Q15771 203 aa11.95□□□□□ -0.5
SCAMP3-205ENST00000472397 IQSEC1Q6DN90 963 aa11.95□□□□□ -0.5
SCAMP3-205ENST00000472397 UHRF1Q96T88 793 aaPredicted RBP11.95□□□□□ -0.5
SCAMP3-205ENST00000472397 WDR11Q9BZH6 1224 aa11.95□□□□□ -0.5
SCAMP3-205ENST00000472397 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.95□□□□□ -0.5
SCAMP3-205ENST00000472397 TCF20Q9UGU0 1960 aaKnown RBP11.95□□□□□ -0.5
SCAMP3-205ENST00000472397 SORBS3O60504 671 aa11.94□□□□□ -0.5
SCAMP3-205ENST00000472397 GOLGA8HP0CJ92 632 aa11.94□□□□□ -0.5
SCAMP3-205ENST00000472397 ALDH5A1P51649 535 aaPredicted RBP11.94□□□□□ -0.5
SCAMP3-205ENST00000472397 MRPS5P82675 430 aaKnown RBP11.94□□□□□ -0.5
SCAMP3-205ENST00000472397 TKFCQ3LXA3 575 aa11.94□□□□□ -0.5
SCAMP3-205ENST00000472397 SYDE2Q5VT97 1194 aa11.94□□□□□ -0.5
SCAMP3-205ENST00000472397 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.94□□□□□ -0.5
SCAMP3-205ENST00000472397 IL27Q8NEV9 243 aa11.94□□□□□ -0.5
SCAMP3-205ENST00000472397 FAM227BQ96M60 508 aa11.94□□□□□ -0.5
SCAMP3-205ENST00000472397 ZKSCAN3Q9BRR0 538 aa11.94□□□□□ -0.5
SCAMP3-205ENST00000472397 FTOQ9C0B1 505 aaKnown RBP eCLIP11.94□□□□□ -0.5
SCAMP3-205ENST00000472397 ALDH8A1Q9H2A2 487 aaPredicted RBP11.94□□□□□ -0.5
SCAMP3-205ENST00000472397 LRRC37A2A6NM11 1700 aa11.94□□□□□ -0.5
SCAMP3-205ENST00000472397 PLIN4Q96Q06 1357 aa11.93□□□□□ -0.5
SCAMP3-205ENST00000472397 TNKSO95271 1327 aa11.93□□□□□ -0.5
SCAMP3-205ENST00000472397 CA3P07451 260 aa11.93□□□□□ -0.5
SCAMP3-205ENST00000472397 ATP2A2P16615 1042 aaKnown RBP11.93□□□□□ -0.5
SCAMP3-205ENST00000472397 NBPF20Q3BBV1 942 aa11.93□□□□□ -0.5
SCAMP3-205ENST00000472397 USH1GQ495M9 461 aa11.93□□□□□ -0.5
SCAMP3-205ENST00000472397 AKNAD1Q5T1N1 836 aa11.93□□□□□ -0.5
SCAMP3-205ENST00000472397 ANKRD45Q5TZF3 282 aa11.93□□□□□ -0.5
SCAMP3-205ENST00000472397 CHST3Q7LGC8 479 aa11.93□□□□□ -0.5
SCAMP3-205ENST00000472397 ARNTL2Q8WYA1 636 aa11.93□□□□□ -0.5
SCAMP3-205ENST00000472397 TBC1D5Q92609 795 aa11.93□□□□□ -0.5
SCAMP3-205ENST00000472397 TMEM47Q9BQJ4 181 aa11.93□□□□□ -0.5
SCAMP3-205ENST00000472397 UBA5Q9GZZ9 404 aa11.93□□□□□ -0.5
SCAMP3-205ENST00000472397 MTIF3Q9H2K0 278 aaKnown RBP11.93□□□□□ -0.5
SCAMP3-205ENST00000472397 LCTP09848 1927 aa11.93□□□□□ -0.5
SCAMP3-205ENST00000472397 SCN5AQ14524 2016 aa11.93□□□□□ -0.5
SCAMP3-205ENST00000472397 ERC2O15083 957 aa11.92□□□□□ -0.5
SCAMP3-205ENST00000472397 CABYRO75952 493 aa11.92□□□□□ -0.5
SCAMP3-205ENST00000472397 ARIH2O95376 493 aa11.92□□□□□ -0.5
SCAMP3-205ENST00000472397 ICAM1P05362 532 aa11.92□□□□□ -0.5
SCAMP3-205ENST00000472397 MX1P20591 662 aa11.92□□□□□ -0.5
SCAMP3-205ENST00000472397 NKX3-2P78367 333 aa11.92□□□□□ -0.5
SCAMP3-205ENST00000472397 RPUSD2Q8IZ73 545 aaKnown RBP11.92□□□□□ -0.5
SCAMP3-205ENST00000472397 ATXN2LQ8WWM7 1075 aaKnown RBP11.92□□□□□ -0.5
SCAMP3-205ENST00000472397 CLEC4DQ8WXI8 215 aa11.92□□□□□ -0.5
SCAMP3-205ENST00000472397 RANBP17Q9H2T7 1088 aaKnown RBP11.92□□□□□ -0.5
SCAMP3-205ENST00000472397 VTA1Q9NP79 307 aa11.92□□□□□ -0.5
SCAMP3-205ENST00000472397 GPHNQ9NQX3 736 aaPredicted RBP11.92□□□□□ -0.5
SCAMP3-205ENST00000472397 TTC41PQ6P2S7 1318 aa11.91□□□□□ -0.5
SCAMP3-205ENST00000472397 A0A0D9SFI3 127 aa11.91□□□□□ -0.5
SCAMP3-205ENST00000472397 FDX1P10109 184 aa11.91□□□□□ -0.5
SCAMP3-205ENST00000472397 PURAQ00577 322 aaKnown RBP11.91□□□□□ -0.5
SCAMP3-205ENST00000472397 PDE4DQ08499 809 aa11.91□□□□□ -0.5
SCAMP3-205ENST00000472397 LRRFIP1Q32MZ4 808 aaKnown RBP11.91□□□□□ -0.5
SCAMP3-205ENST00000472397 DUSP28Q4G0W2 176 aa11.91□□□□□ -0.5
SCAMP3-205ENST00000472397 FAM117BQ6P1L5 589 aa11.91□□□□□ -0.5
SCAMP3-205ENST00000472397 RNF207Q6ZRF8 634 aa11.91□□□□□ -0.5
SCAMP3-205ENST00000472397 DCAF4Q8WV16 495 aa11.91□□□□□ -0.5
SCAMP3-205ENST00000472397 ZFP91Q96JP5 570 aaPredicted RBP11.91□□□□□ -0.5
SCAMP3-205ENST00000472397 MTG1Q9BT17 334 aaPredicted RBP11.91□□□□□ -0.5
SCAMP3-205ENST00000472397 MTUS1Q9ULD2 1270 aa11.91□□□□□ -0.5
SCAMP3-205ENST00000472397 FGAP02671 866 aa11.9□□□□□ -0.5
SCAMP3-205ENST00000472397 RPS6P62753 249 aaKnown RBP11.9□□□□□ -0.5
SCAMP3-205ENST00000472397 NMIQ13287 307 aaPredicted RBP11.9□□□□□ -0.5
SCAMP3-205ENST00000472397 TCTN1Q2MV58 587 aa11.9□□□□□ -0.5
SCAMP3-205ENST00000472397 TMEM67Q5HYA8 995 aa11.9□□□□□ -0.5
SCAMP3-205ENST00000472397 SEPT14Q6ZU15 432 aa11.9□□□□□ -0.5
SCAMP3-205ENST00000472397 ZNF589Q86UQ0 364 aaPredicted RBP11.9□□□□□ -0.5
SCAMP3-205ENST00000472397 RETREG2Q8NC44 543 aa11.9□□□□□ -0.5
SCAMP3-205ENST00000472397 VAT1LQ9HCJ6 419 aa11.9□□□□□ -0.5
SCAMP3-205ENST00000472397 POLR3EQ9NVU0 708 aa11.9□□□□□ -0.5
SCAMP3-205ENST00000472397 NOD1Q9Y239 953 aa11.9□□□□□ -0.5
SCAMP3-205ENST00000472397 PCDHA11Q9Y5I1 949 aa11.9□□□□□ -0.5
SCAMP3-205ENST00000472397 CHD9Q3L8U1 2897 aa11.9□□□□□ -0.5
SCAMP3-205ENST00000472397 LCHNA4D1U4 455 aa11.89□□□□□ -0.51
SCAMP3-205ENST00000472397 PLA2G6O60733 806 aa11.89□□□□□ -0.51
SCAMP3-205ENST00000472397 TXNP10599 105 aaKnown RBP11.89□□□□□ -0.51
SCAMP3-205ENST00000472397 TOP1P11387 765 aaKnown RBP11.89□□□□□ -0.51
SCAMP3-205ENST00000472397 PPP2R5BQ15173 497 aa11.89□□□□□ -0.51
SCAMP3-205ENST00000472397 LY6KQ17RY6 165 aa11.89□□□□□ -0.51
SCAMP3-205ENST00000472397 TBC1D10CQ8IV04 446 aa11.89□□□□□ -0.51
SCAMP3-205ENST00000472397 MORC4Q8TE76 937 aa11.89□□□□□ -0.51
SCAMP3-205ENST00000472397 AFG1LQ8WV93 481 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms