RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 ISY1Q9ULR0 285 aaKnown RBP22.64■■□□□ 1.21
SORT1-203ENST00000471996 BAIAP3O94812 1187 aa22.63■■□□□ 1.21
SORT1-203ENST00000471996 MYL3P08590 195 aa22.63■■□□□ 1.21
SORT1-203ENST00000471996 CPT1AP50416 773 aa22.63■■□□□ 1.21
SORT1-203ENST00000471996 MUM1L1Q5H9M0 696 aa22.63■■□□□ 1.21
SORT1-203ENST00000471996 GMCL1Q96IK5 515 aa22.63■■□□□ 1.21
SORT1-203ENST00000471996 WDR11Q9BZH6 1224 aa22.63■■□□□ 1.21
SORT1-203ENST00000471996 MUC6Q6W4X9 2439 aa22.63■■□□□ 1.21
SORT1-203ENST00000471996 HMMRO75330 724 aa22.62■■□□□ 1.21
SORT1-203ENST00000471996 IKQ13123 557 aaPredicted RBP22.62■■□□□ 1.21
SORT1-203ENST00000471996 NBPF20Q3BBV1 942 aa22.62■■□□□ 1.21
SORT1-203ENST00000471996 FAM47CQ5HY64 1035 aa22.62■■□□□ 1.21
SORT1-203ENST00000471996 PURBQ96QR8 312 aaKnown RBP22.62■■□□□ 1.21
SORT1-203ENST00000471996 GPHNQ9NQX3 736 aaPredicted RBP22.62■■□□□ 1.21
SORT1-203ENST00000471996 PLA2G6O60733 806 aa22.61■■□□□ 1.21
SORT1-203ENST00000471996 SLC1A4P43007 532 aa22.61■■□□□ 1.21
SORT1-203ENST00000471996 NFRKBQ6P4R8 1299 aa22.61■■□□□ 1.21
SORT1-203ENST00000471996 SIRT2Q8IXJ6 389 aa22.61■■□□□ 1.21
SORT1-203ENST00000471996 NEDD1Q8NHV4 660 aa22.61■■□□□ 1.21
SORT1-203ENST00000471996 EPB41L4AQ9HCS5 686 aaPredicted RBP22.61■■□□□ 1.21
SORT1-203ENST00000471996 PLIN4Q96Q06 1357 aa22.61■■□□□ 1.21
SORT1-203ENST00000471996 LCHNA4D1U4 455 aa22.6■■□□□ 1.21
SORT1-203ENST00000471996 KCNJ6P48051 423 aa22.6■■□□□ 1.21
SORT1-203ENST00000471996 BFSP2Q13515 415 aa22.6■■□□□ 1.21
SORT1-203ENST00000471996 NSMFQ6X4W1 530 aa22.6■■□□□ 1.21
SORT1-203ENST00000471996 FAM178BQ8IXR5 827 aa22.6■■□□□ 1.21
SORT1-203ENST00000471996 GJD3Q8N144 294 aa22.6■■□□□ 1.21
SORT1-203ENST00000471996 PANK1Q8TE04 598 aa22.6■■□□□ 1.21
SORT1-203ENST00000471996 GDPD5Q8WTR4 605 aa22.6■■□□□ 1.21
SORT1-203ENST00000471996 OSBP2Q969R2 916 aa22.6■■□□□ 1.21
SORT1-203ENST00000471996 UBE2ZQ9H832 354 aaPredicted RBP22.6■■□□□ 1.21
SORT1-203ENST00000471996 SCN5AQ14524 2016 aa22.59■■□□□ 1.21
SORT1-203ENST00000471996 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.59■■□□□ 1.21
SORT1-203ENST00000471996 RBM47A0AV96 593 aaKnown RBP22.59■■□□□ 1.21
SORT1-203ENST00000471996 TSPY3P0CV98 308 aa22.59■■□□□ 1.21
SORT1-203ENST00000471996 TSPY8P0CW00 308 aa22.59■■□□□ 1.21
SORT1-203ENST00000471996 MCCP23508 829 aa22.59■■□□□ 1.21
SORT1-203ENST00000471996 SNAP25P60880 206 aa22.59■■□□□ 1.21
SORT1-203ENST00000471996 PTPN11Q06124 597 aaPredicted RBP22.59■■□□□ 1.21
SORT1-203ENST00000471996 OR6J1Q8NGC5 347 aa22.59■■□□□ 1.21
SORT1-203ENST00000471996 ADD3Q9UEY8 706 aaKnown RBP22.59■■□□□ 1.21
SORT1-203ENST00000471996 MYH4Q9Y623 1939 aa22.59■■□□□ 1.21
SORT1-203ENST00000471996 TDO2P48775 406 aa22.58■■□□□ 1.21
SORT1-203ENST00000471996 LEXMQ3ZCV2 418 aa22.58■■□□□ 1.21
SORT1-203ENST00000471996 BRDTQ58F21 947 aaPredicted RBP22.58■■□□□ 1.21
SORT1-203ENST00000471996 KCTD1Q719H9 257 aa22.58■■□□□ 1.21
SORT1-203ENST00000471996 PPP1R13LQ8WUF5 828 aa22.58■■□□□ 1.21
SORT1-203ENST00000471996 CHMP4CQ96CF2 233 aa22.58■■□□□ 1.21
SORT1-203ENST00000471996 CCPG1Q9ULG6 757 aa22.58■■□□□ 1.21
SORT1-203ENST00000471996 PRR12Q9ULL5 1215 aa22.58■■□□□ 1.21
SORT1-203ENST00000471996 LOC102724159A0A0B4J2E5 919 aa22.57■■□□□ 1.2
SORT1-203ENST00000471996 KPNA6O60684 536 aa22.57■■□□□ 1.2
SORT1-203ENST00000471996 MRE11P49959 708 aa22.57■■□□□ 1.2
SORT1-203ENST00000471996 ALDH5A1P51649 535 aaPredicted RBP22.57■■□□□ 1.2
SORT1-203ENST00000471996 WDR5P61964 334 aaKnown RBP22.57■■□□□ 1.2
SORT1-203ENST00000471996 PWP2Q15269 919 aaKnown RBP22.57■■□□□ 1.2
SORT1-203ENST00000471996 LRRFIP1Q32MZ4 808 aaKnown RBP22.57■■□□□ 1.2
SORT1-203ENST00000471996 APPBP2Q92624 585 aa22.57■■□□□ 1.2
SORT1-203ENST00000471996 ZBED2Q9BTP6 218 aa22.57■■□□□ 1.2
SORT1-203ENST00000471996 SUGCTQ9HAC7 445 aa22.57■■□□□ 1.2
SORT1-203ENST00000471996 CCER2I3L3R5 266 aa22.56■■□□□ 1.2
SORT1-203ENST00000471996 GPAA1O43292 621 aa22.56■■□□□ 1.2
SORT1-203ENST00000471996 ALADP13716 330 aa22.56■■□□□ 1.2
SORT1-203ENST00000471996 GNAT2P19087 354 aa22.56■■□□□ 1.2
SORT1-203ENST00000471996 TFAP4Q01664 338 aa22.56■■□□□ 1.2
SORT1-203ENST00000471996 BAATQ14032 418 aaPredicted RBP22.56■■□□□ 1.2
SORT1-203ENST00000471996 RCSD1Q6JBY9 416 aa22.56■■□□□ 1.2
SORT1-203ENST00000471996 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.56■■□□□ 1.2
SORT1-203ENST00000471996 NOD1Q9Y239 953 aa22.56■■□□□ 1.2
SORT1-203ENST00000471996 NKRFO15226 690 aaKnown RBP eCLIP22.55■■□□□ 1.22e-7■■■■□ 24.9
SORT1-203ENST00000471996 APPP05067 770 aa22.55■■□□□ 1.2
SORT1-203ENST00000471996 ICAM1P05362 532 aa22.55■■□□□ 1.2
SORT1-203ENST00000471996 PDE4BQ07343 736 aa22.55■■□□□ 1.2
SORT1-203ENST00000471996 TMCO2Q7Z6W1 182 aaPredicted RBP22.55■■□□□ 1.2
SORT1-203ENST00000471996 KBTBD3Q8NAB2 608 aa22.55■■□□□ 1.2
SORT1-203ENST00000471996 UIMC1Q96RL1 719 aa22.55■■□□□ 1.2
SORT1-203ENST00000471996 COL4A4P53420 1690 aaPredicted RBP22.55■■□□□ 1.2
SORT1-203ENST00000471996 MYH7P12883 1935 aa22.55■■□□□ 1.2
SORT1-203ENST00000471996 RAD50Q92878 1312 aa22.55■■□□□ 1.2
SORT1-203ENST00000471996 A6NJR5 290 aa22.54■■□□□ 1.2
SORT1-203ENST00000471996 KCNA5P22460 613 aa22.54■■□□□ 1.2
SORT1-203ENST00000471996 SSTR3P32745 418 aaPredicted RBP22.54■■□□□ 1.2
SORT1-203ENST00000471996 ERVK-21P61565 698 aa22.54■■□□□ 1.2
SORT1-203ENST00000471996 GPNMBQ14956 572 aa22.54■■□□□ 1.2
SORT1-203ENST00000471996 IFNL3Q8IZI9 196 aa22.54■■□□□ 1.2
SORT1-203ENST00000471996 CAGE1Q8TC20 777 aa22.54■■□□□ 1.2
SORT1-203ENST00000471996 AFAP1L1Q8TED9 768 aa22.54■■□□□ 1.2
SORT1-203ENST00000471996 TGS1Q96RS0 853 aaKnown RBP22.54■■□□□ 1.2
SORT1-203ENST00000471996 RAD9AQ99638 391 aa22.54■■□□□ 1.2
SORT1-203ENST00000471996 MTUS1Q9ULD2 1270 aa22.54■■□□□ 1.2
SORT1-203ENST00000471996 SCN10AQ9Y5Y9 1956 aa22.53■■□□□ 1.2
SORT1-203ENST00000471996 PATL2C9JE40 543 aaKnown RBP22.53■■□□□ 1.2
SORT1-203ENST00000471996 RNF113AO15541 343 aaKnown RBP22.53■■□□□ 1.2
SORT1-203ENST00000471996 IL9P15248 144 aa22.53■■□□□ 1.2
SORT1-203ENST00000471996 DEFB103AP81534 67 aa22.53■■□□□ 1.2
SORT1-203ENST00000471996 PPP2R5BQ15173 497 aa22.53■■□□□ 1.2
SORT1-203ENST00000471996 PPP4R3BQ5MIZ7 849 aa22.53■■□□□ 1.2
SORT1-203ENST00000471996 CCDC155Q8N6L0 562 aa22.53■■□□□ 1.2
SORT1-203ENST00000471996 TANC1Q9C0D5 1861 aa22.52■■□□□ 1.2
SORT1-203ENST00000471996 GJB5O95377 273 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms