RNA–Protein interactions for RNA: ENST00000471862.1

COL4A3-205, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 5

Gene COL4A3, Length 755 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-205ENST00000471862 TLK2Q86UE8 772 aa13.47□□□□□ -0.25
COL4A3-205ENST00000471862 STAG2Q8N3U4 1231 aa13.47□□□□□ -0.25
COL4A3-205ENST00000471862 GLT1D1Q96MS3 346 aa13.47□□□□□ -0.25
COL4A3-205ENST00000471862 MAF1Q9H063 256 aa13.47□□□□□ -0.25
COL4A3-205ENST00000471862 Q9Y3F1 56 aa13.47□□□□□ -0.25
COL4A3-205ENST00000471862 ABCB11O95342 1321 aa13.46□□□□□ -0.25
COL4A3-205ENST00000471862 E7EWF7 191 aa13.46□□□□□ -0.25
COL4A3-205ENST00000471862 PQBP1O60828 265 aaKnown RBP13.46□□□□□ -0.25
COL4A3-205ENST00000471862 PARP1P09874 1014 aaKnown RBP13.46□□□□□ -0.25
COL4A3-205ENST00000471862 CALML3P27482 149 aa13.46□□□□□ -0.25
COL4A3-205ENST00000471862 BEX3Q00994 111 aa13.46□□□□□ -0.25
COL4A3-205ENST00000471862 TRDNQ13061 729 aa13.46□□□□□ -0.25
COL4A3-205ENST00000471862 QRICH1Q2TAL8 776 aa13.46□□□□□ -0.25
COL4A3-205ENST00000471862 USH1GQ495M9 461 aa13.46□□□□□ -0.25
COL4A3-205ENST00000471862 DNERQ8NFT8 737 aa13.46□□□□□ -0.25
COL4A3-205ENST00000471862 BADQ92934 168 aa13.46□□□□□ -0.25
COL4A3-205ENST00000471862 MTMR8Q96EF0 704 aa13.46□□□□□ -0.25
COL4A3-205ENST00000471862 JMJD4Q9H9V9 463 aa13.46□□□□□ -0.25
COL4A3-205ENST00000471862 MAD2L2Q9UI95 211 aa13.46□□□□□ -0.25
COL4A3-205ENST00000471862 BAZ2BQ9UIF8 2168 aaKnown RBP13.45□□□□□ -0.26
COL4A3-205ENST00000471862 A0A0U1RQG5 324 aaPredicted RBP13.45□□□□□ -0.26
COL4A3-205ENST00000471862 PALM3A6NDB9 673 aaPredicted RBP13.45□□□□□ -0.26
COL4A3-205ENST00000471862 ARVCFO00192 962 aa13.45□□□□□ -0.26
COL4A3-205ENST00000471862 ANTXR2P58335 489 aa13.45□□□□□ -0.26
COL4A3-205ENST00000471862 SLC35G1Q2M3R5 365 aa13.45□□□□□ -0.26
COL4A3-205ENST00000471862 DUSP28Q4G0W2 176 aa13.45□□□□□ -0.26
COL4A3-205ENST00000471862 KIAA1211Q6ZU35 1233 aa13.45□□□□□ -0.26
COL4A3-205ENST00000471862 MB21D2Q8IYB1 491 aaPredicted RBP13.45□□□□□ -0.26
COL4A3-205ENST00000471862 SLC43A3Q8NBI5 491 aa13.45□□□□□ -0.26
COL4A3-205ENST00000471862 NCOA7Q8NI08 942 aa13.45□□□□□ -0.26
COL4A3-205ENST00000471862 TBC1D5Q92609 795 aa13.45□□□□□ -0.26
COL4A3-205ENST00000471862 LSG1Q9H089 658 aaKnown RBP13.45□□□□□ -0.26
COL4A3-205ENST00000471862 SENP2Q9HC62 589 aa13.45□□□□□ -0.26
COL4A3-205ENST00000471862 TBX21Q9UL17 535 aa13.45□□□□□ -0.26
COL4A3-205ENST00000471862 RBM8AQ9Y5S9 174 aaKnown RBP13.45□□□□□ -0.26
COL4A3-205ENST00000471862 KIAA1217Q5T5P2 1943 aa13.45□□□□□ -0.26
COL4A3-205ENST00000471862 LAMA2P24043 3122 aaKnown RBP13.44□□□□□ -0.26
COL4A3-205ENST00000471862 MROH7Q68CQ1 1323 aa13.44□□□□□ -0.26
COL4A3-205ENST00000471862 KLRF2D3W0D1 207 aa13.44□□□□□ -0.26
COL4A3-205ENST00000471862 OPLAHO14841 1288 aa13.44□□□□□ -0.26
COL4A3-205ENST00000471862 DYNC1LI2O43237 492 aaPredicted RBP13.44□□□□□ -0.26
COL4A3-205ENST00000471862 GHRHRQ02643 423 aa13.44□□□□□ -0.26
COL4A3-205ENST00000471862 GRM4Q14833 912 aa13.44□□□□□ -0.26
COL4A3-205ENST00000471862 FSCN1Q16658 493 aaKnown RBP13.44□□□□□ -0.26
COL4A3-205ENST00000471862 C9orf50Q5SZB4 431 aa13.44□□□□□ -0.26
COL4A3-205ENST00000471862 NOL8Q76FK4 1167 aaKnown RBP13.44□□□□□ -0.26
COL4A3-205ENST00000471862 CENPQQ7L2Z9 268 aaPredicted RBP13.44□□□□□ -0.26
COL4A3-205ENST00000471862 FBXO11Q86XK2 927 aa13.44□□□□□ -0.26
COL4A3-205ENST00000471862 FAM126BQ8IXS8 530 aa13.44□□□□□ -0.26
COL4A3-205ENST00000471862 SYTL5Q8TDW5 730 aaPredicted RBP13.44□□□□□ -0.26
COL4A3-205ENST00000471862 AP5M1Q9H0R1 490 aa13.44□□□□□ -0.26
COL4A3-205ENST00000471862 SCN10AQ9Y5Y9 1956 aa13.43□□□□□ -0.26
COL4A3-205ENST00000471862 GRIN2DO15399 1336 aa13.43□□□□□ -0.26
COL4A3-205ENST00000471862 DCDC2CA8MYV0 355 aa13.43□□□□□ -0.26
COL4A3-205ENST00000471862 IFIT3O14879 490 aaKnown RBP13.43□□□□□ -0.26
COL4A3-205ENST00000471862 PPP1R11O60927 126 aaPredicted RBP13.43□□□□□ -0.26
COL4A3-205ENST00000471862 CABYRO75952 493 aa13.43□□□□□ -0.26
COL4A3-205ENST00000471862 CD4P01730 458 aa13.43□□□□□ -0.26
COL4A3-205ENST00000471862 TROAPQ12815 778 aa13.43□□□□□ -0.26
COL4A3-205ENST00000471862 SHHQ15465 462 aa13.43□□□□□ -0.26
COL4A3-205ENST00000471862 CXCL17Q6UXB2 119 aa13.43□□□□□ -0.26
COL4A3-205ENST00000471862 RALYLQ86SE5 291 aaKnown RBP13.43□□□□□ -0.26
COL4A3-205ENST00000471862 SKAP1Q86WV1 359 aa13.43□□□□□ -0.26
COL4A3-205ENST00000471862 IGDCC4Q8TDY8 1250 aa13.43□□□□□ -0.26
COL4A3-205ENST00000471862 ESYT1Q9BSJ8 1104 aa13.43□□□□□ -0.26
COL4A3-205ENST00000471862 WDR11Q9BZH6 1224 aa13.43□□□□□ -0.26
COL4A3-205ENST00000471862 RIOX1Q9H6W3 641 aa13.43□□□□□ -0.26
COL4A3-205ENST00000471862 VAT1LQ9HCJ6 419 aa13.43□□□□□ -0.26
COL4A3-205ENST00000471862 TMEM39AQ9NV64 488 aa13.43□□□□□ -0.26
COL4A3-205ENST00000471862 COL20A1Q9P218 1284 aa13.43□□□□□ -0.26
COL4A3-205ENST00000471862 MRPL11Q9Y3B7 192 aaKnown RBP13.43□□□□□ -0.26
COL4A3-205ENST00000471862 CYTH3O43739 400 aa13.42□□□□□ -0.26
COL4A3-205ENST00000471862 RAG1P15918 1043 aa13.42□□□□□ -0.26
COL4A3-205ENST00000471862 EPHB4P54760 987 aa13.42□□□□□ -0.26
COL4A3-205ENST00000471862 PDE4DQ08499 809 aa13.42□□□□□ -0.26
COL4A3-205ENST00000471862 WTAPQ15007 396 aa13.42□□□□□ -0.26
COL4A3-205ENST00000471862 BMP2KLQ5H9B9 411 aa13.42□□□□□ -0.26
COL4A3-205ENST00000471862 CHST3Q7LGC8 479 aa13.42□□□□□ -0.26
COL4A3-205ENST00000471862 MCF2L2Q86YR7 1114 aa13.42□□□□□ -0.26
COL4A3-205ENST00000471862 TAAR1Q96RJ0 339 aa13.42□□□□□ -0.26
COL4A3-205ENST00000471862 MPHOSPH6Q99547 160 aaKnown RBP13.42□□□□□ -0.26
COL4A3-205ENST00000471862 AMNQ9BXJ7 453 aa13.42□□□□□ -0.26
COL4A3-205ENST00000471862 ERICH2A1L162 156 aa13.41□□□□□ -0.26
COL4A3-205ENST00000471862 ZBTB5O15062 677 aa13.41□□□□□ -0.26
COL4A3-205ENST00000471862 NKRFO15226 690 aaKnown RBP eCLIP13.41□□□□□ -0.26
COL4A3-205ENST00000471862 DHX16O60231 1041 aaKnown RBP13.41□□□□□ -0.26
COL4A3-205ENST00000471862 ZEB2O60315 1214 aa13.41□□□□□ -0.26
COL4A3-205ENST00000471862 ARIH2O95376 493 aa13.41□□□□□ -0.26
COL4A3-205ENST00000471862 TIMP1P01033 207 aa13.41□□□□□ -0.26
COL4A3-205ENST00000471862 HSD17B4P51659 736 aa13.41□□□□□ -0.26
COL4A3-205ENST00000471862 COL9A3Q14050 684 aaPredicted RBP13.41□□□□□ -0.26
COL4A3-205ENST00000471862 SART3Q15020 963 aaKnown RBP13.41□□□□□ -0.26
COL4A3-205ENST00000471862 NECTIN1Q15223 517 aa13.41□□□□□ -0.26
COL4A3-205ENST00000471862 SCFD2Q8WU76 684 aa13.41□□□□□ -0.26
COL4A3-205ENST00000471862 VTI1AQ96AJ9 217 aa13.41□□□□□ -0.26
COL4A3-205ENST00000471862 MTA3Q9BTC8 594 aa13.41□□□□□ -0.26
COL4A3-205ENST00000471862 B4DLN1 442 aa13.4□□□□□ -0.26
COL4A3-205ENST00000471862 SLC27A2O14975 620 aa13.4□□□□□ -0.26
COL4A3-205ENST00000471862 TLR3O15455 904 aaKnown RBP13.4□□□□□ -0.26
COL4A3-205ENST00000471862 MRPL12P52815 198 aaKnown RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms