RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 ZSCAN5CA6NGD5 496 aaPredicted RBP4.67□□□□□ -1.66
VPS50-210ENST00000471188 SPDYE5A6NIY4 337 aa4.67□□□□□ -1.66
VPS50-210ENST00000471188 TPD52L2O43399 206 aaKnown RBP4.67□□□□□ -1.66
VPS50-210ENST00000471188 DNAJC8O75937 253 aaPredicted RBP4.67□□□□□ -1.66
VPS50-210ENST00000471188 HEXIM1O94992 359 aaKnown RBP4.67□□□□□ -1.66
VPS50-210ENST00000471188 ANXA1P04083 346 aa4.67□□□□□ -1.66
VPS50-210ENST00000471188 IMPDH2P12268 514 aa4.67□□□□□ -1.66
VPS50-210ENST00000471188 ATP2A2P16615 1042 aaKnown RBP4.67□□□□□ -1.66
VPS50-210ENST00000471188 PLCD1P51178 756 aa4.67□□□□□ -1.66
VPS50-210ENST00000471188 LACTBP83111 547 aaPredicted RBP4.67□□□□□ -1.66
VPS50-210ENST00000471188 ATP11AP98196 1134 aa4.67□□□□□ -1.66
VPS50-210ENST00000471188 TRIM29Q14134 588 aa4.67□□□□□ -1.66
VPS50-210ENST00000471188 IMMTQ16891 758 aaKnown RBP4.67□□□□□ -1.66
VPS50-210ENST00000471188 GLE1Q53GS7 698 aaKnown RBP4.67□□□□□ -1.66
VPS50-210ENST00000471188 SPATA1Q5VX52 437 aa4.67□□□□□ -1.66
VPS50-210ENST00000471188 PAPD7Q5XG87 772 aaKnown RBP4.67□□□□□ -1.66
VPS50-210ENST00000471188 CRELD2Q6UXH1 353 aaPredicted RBP4.67□□□□□ -1.66
VPS50-210ENST00000471188 STOX1Q6ZVD7 989 aa4.67□□□□□ -1.66
VPS50-210ENST00000471188 ARMC9Q7Z3E5 817 aa4.67□□□□□ -1.66
VPS50-210ENST00000471188 ERICH1Q86X53 443 aa4.67□□□□□ -1.66
VPS50-210ENST00000471188 VPS37DQ86XT2 251 aa4.67□□□□□ -1.66
VPS50-210ENST00000471188 PI4KAP1Q8N8J0 262 aa4.67□□□□□ -1.66
VPS50-210ENST00000471188 SMCR8Q8TEV9 937 aaPredicted RBP4.67□□□□□ -1.66
VPS50-210ENST00000471188 NAF1Q96HR8 494 aaKnown RBP4.67□□□□□ -1.66
VPS50-210ENST00000471188 AIFM3Q96NN9 605 aa4.67□□□□□ -1.66
VPS50-210ENST00000471188 ABCF2Q9UG63 623 aa4.67□□□□□ -1.66
VPS50-210ENST00000471188 LUC7L2Q9Y383 392 aaKnown RBP4.67□□□□□ -1.66
VPS50-210ENST00000471188 DUSP10Q9Y6W6 482 aa4.67□□□□□ -1.66
VPS50-210ENST00000471188 EFCAB6Q5THR3 1501 aa4.67□□□□□ -1.66
VPS50-210ENST00000471188 TUBGCP6Q96RT7 1819 aa4.67□□□□□ -1.66
VPS50-210ENST00000471188 CHD2O14647 1828 aaKnown RBP4.66□□□□□ -1.66
VPS50-210ENST00000471188 DIP2AQ14689 1571 aa4.66□□□□□ -1.66
VPS50-210ENST00000471188 CCT8L1PA6NM43 557 aa4.66□□□□□ -1.66
VPS50-210ENST00000471188 RNF225M0QZC1 329 aaPredicted RBP4.66□□□□□ -1.66
VPS50-210ENST00000471188 TLL1O43897 1013 aa4.66□□□□□ -1.66
VPS50-210ENST00000471188 CTNND1O60716 968 aaKnown RBP4.66□□□□□ -1.66
VPS50-210ENST00000471188 OATP04181 439 aa4.66□□□□□ -1.66
VPS50-210ENST00000471188 MYL1P05976 194 aa4.66□□□□□ -1.66
VPS50-210ENST00000471188 CASP1P29466 404 aa4.66□□□□□ -1.66
VPS50-210ENST00000471188 CYLC1P35663 651 aaPredicted RBP4.66□□□□□ -1.66
VPS50-210ENST00000471188 HAND2P61296 217 aa4.66□□□□□ -1.66
VPS50-210ENST00000471188 KIF23Q02241 960 aaPredicted RBP4.66□□□□□ -1.66
VPS50-210ENST00000471188 PPP4R3AQ6IN85 833 aa4.66□□□□□ -1.66
VPS50-210ENST00000471188 BLOC1S3Q6QNY0 202 aa4.66□□□□□ -1.66
VPS50-210ENST00000471188 DDX46Q7L014 1031 aaKnown RBP4.66□□□□□ -1.66
VPS50-210ENST00000471188 ANKRD23Q86SG2 305 aa4.66□□□□□ -1.66
VPS50-210ENST00000471188 GALNT15Q8N3T1 639 aa4.66□□□□□ -1.66
VPS50-210ENST00000471188 KIF2BQ8N4N8 673 aa4.66□□□□□ -1.66
VPS50-210ENST00000471188 KRI1Q8N9T8 703 aaKnown RBP4.66□□□□□ -1.66
VPS50-210ENST00000471188 TTC13Q8NBP0 860 aa4.66□□□□□ -1.66
VPS50-210ENST00000471188 RAPGEF5Q92565 580 aa4.66□□□□□ -1.66
VPS50-210ENST00000471188 KLHL29Q96CT2 875 aa4.66□□□□□ -1.66
VPS50-210ENST00000471188 BICD1Q96G01 975 aa4.66□□□□□ -1.66
VPS50-210ENST00000471188 PLEKHG4BQ96PX9 1271 aa4.66□□□□□ -1.66
VPS50-210ENST00000471188 ALG1Q9BT22 464 aa4.66□□□□□ -1.66
VPS50-210ENST00000471188 LACRTQ9GZZ8 138 aa4.66□□□□□ -1.66
VPS50-210ENST00000471188 TMEM134Q9H6X4 195 aa4.66□□□□□ -1.66
VPS50-210ENST00000471188 SLC5A4Q9NY91 659 aa4.66□□□□□ -1.66
VPS50-210ENST00000471188 BLOC1S6Q9UL45 172 aa4.66□□□□□ -1.66
VPS50-210ENST00000471188 NOVA2Q9UNW9 492 aaKnown RBP4.66□□□□□ -1.66
VPS50-210ENST00000471188 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.66□□□□□ -1.66
VPS50-210ENST00000471188 TULP4Q9NRJ4 1543 aa4.66□□□□□ -1.66
VPS50-210ENST00000471188 hCG_2014768A0A024R1R8 64 aa4.66□□□□□ -1.66
VPS50-210ENST00000471188 M0R2C6 588 aa4.66□□□□□ -1.66
VPS50-210ENST00000471188 ZSCAN9O15535 394 aaPredicted RBP4.66□□□□□ -1.66
VPS50-210ENST00000471188 TRAPPC3O43617 180 aa4.66□□□□□ -1.66
VPS50-210ENST00000471188 HIP1RO75146 1068 aa4.66□□□□□ -1.66
VPS50-210ENST00000471188 TACC1O75410 805 aa4.66□□□□□ -1.66
VPS50-210ENST00000471188 VIMP08670 466 aaKnown RBP4.66□□□□□ -1.66
VPS50-210ENST00000471188 CCND1P24385 295 aa4.66□□□□□ -1.66
VPS50-210ENST00000471188 CNGA1P29973 690 aa4.66□□□□□ -1.66
VPS50-210ENST00000471188 CTNNA1P35221 906 aaKnown RBP4.66□□□□□ -1.66
VPS50-210ENST00000471188 ABL2P42684 1182 aa4.66□□□□□ -1.66
VPS50-210ENST00000471188 KCNJ2P63252 427 aa4.66□□□□□ -1.66
VPS50-210ENST00000471188 ITGB3BPQ13352 177 aaPredicted RBP4.66□□□□□ -1.66
VPS50-210ENST00000471188 SPA17Q15506 151 aa4.66□□□□□ -1.66
VPS50-210ENST00000471188 ZMYM1Q5SVZ6 1142 aa4.66□□□□□ -1.66
VPS50-210ENST00000471188 NUGGCQ68CJ6 796 aa4.66□□□□□ -1.66
VPS50-210ENST00000471188 NFRKBQ6P4R8 1299 aa4.66□□□□□ -1.66
VPS50-210ENST00000471188 TMEM154Q6P9G4 183 aa4.66□□□□□ -1.66
VPS50-210ENST00000471188 UBE3BQ7Z3V4 1068 aa4.66□□□□□ -1.66
VPS50-210ENST00000471188 PXYLP1Q8TE99 480 aa4.66□□□□□ -1.66
VPS50-210ENST00000471188 UBLCP1Q8WVY7 318 aaPredicted RBP4.66□□□□□ -1.66
VPS50-210ENST00000471188 CCT6BQ92526 530 aa4.66□□□□□ -1.66
VPS50-210ENST00000471188 STAMQ92783 540 aa4.66□□□□□ -1.66
VPS50-210ENST00000471188 P3H4Q92791 437 aa4.66□□□□□ -1.66
VPS50-210ENST00000471188 SELENOSQ9BQE4 189 aa4.66□□□□□ -1.66
VPS50-210ENST00000471188 TAF1DQ9H5J8 278 aaPredicted RBP4.66□□□□□ -1.66
VPS50-210ENST00000471188 PRDM16Q9HAZ2 1276 aa4.66□□□□□ -1.66
VPS50-210ENST00000471188 DLGAP2Q9P1A6 1054 aa4.66□□□□□ -1.66
VPS50-210ENST00000471188 SAMD15Q9P1V8 674 aa4.66□□□□□ -1.66
VPS50-210ENST00000471188 CTNND2Q9UQB3 1225 aa4.66□□□□□ -1.66
VPS50-210ENST00000471188 HPSEQ9Y251 543 aa4.66□□□□□ -1.66
VPS50-210ENST00000471188 REXO2Q9Y3B8 237 aaKnown RBP4.66□□□□□ -1.66
VPS50-210ENST00000471188 EID1Q9Y6B2 187 aa4.66□□□□□ -1.66
VPS50-210ENST00000471188 DLG5Q8TDM6 1919 aa4.66□□□□□ -1.66
VPS50-210ENST00000471188 A8MUI8 341 aa4.66□□□□□ -1.66
VPS50-210ENST00000471188 USO1O60763 962 aaKnown RBP4.66□□□□□ -1.66
VPS50-210ENST00000471188 PFDN1O60925 122 aa4.66□□□□□ -1.66
VPS50-210ENST00000471188 SLC10A3P09131 477 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms