RNA–Protein interactions for RNA: ENST00000470944.1

SOD1-203, Transcript of superoxide dismutase 1, humanhuman

TSL 2

Gene SOD1, Length 1,746 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-203ENST00000470944 FBXO40Q9UH90 709 aa33.11■■■□□ 2.89
SOD1-203ENST00000470944 PCDHA6Q9UN73 950 aa33.11■■■□□ 2.89
SOD1-203ENST00000470944 PCDHA8Q9Y5H6 950 aa33.11■■■□□ 2.89
SOD1-203ENST00000470944 GCOM1H8Y6P7 765 aaPredicted RBP33.1■■■□□ 2.89
SOD1-203ENST00000470944 PIK3CDO00329 1044 aa33.1■■■□□ 2.89
SOD1-203ENST00000470944 POLR2MP0CAP2 368 aa33.1■■■□□ 2.89
SOD1-203ENST00000470944 CLK2P49760 499 aaKnown RBP33.1■■■□□ 2.89
SOD1-203ENST00000470944 HSD17B4P51659 736 aa33.1■■■□□ 2.89
SOD1-203ENST00000470944 RPS6P62753 249 aaKnown RBP33.1■■■□□ 2.89
SOD1-203ENST00000470944 MAP2K1Q02750 393 aaPredicted RBP33.1■■■□□ 2.89
SOD1-203ENST00000470944 SAFBQ15424 915 aaKnown RBP eCLIP33.1■■■□□ 2.89
SOD1-203ENST00000470944 RNF207Q6ZRF8 634 aa33.1■■■□□ 2.89
SOD1-203ENST00000470944 REXO1Q8N1G1 1221 aaKnown RBP33.1■■■□□ 2.89
SOD1-203ENST00000470944 COL20A1Q9P218 1284 aa33.1■■■□□ 2.89
SOD1-203ENST00000470944 GHRHRQ02643 423 aa33.09■■■□□ 2.89
SOD1-203ENST00000470944 BAATQ14032 418 aaPredicted RBP33.09■■■□□ 2.89
SOD1-203ENST00000470944 EARS2Q5JPH6 523 aaKnown RBP33.09■■■□□ 2.89
SOD1-203ENST00000470944 JAKMIP3Q5VZ66 844 aa33.09■■■□□ 2.89
SOD1-203ENST00000470944 TNFRSF25Q93038 417 aa33.09■■■□□ 2.89
SOD1-203ENST00000470944 PURBQ96QR8 312 aaKnown RBP33.09■■■□□ 2.89
SOD1-203ENST00000470944 CYP39A1Q9NYL5 469 aa33.09■■■□□ 2.89
SOD1-203ENST00000470944 CCAR1Q8IX12 1150 aaKnown RBP33.08■■■□□ 2.89
SOD1-203ENST00000470944 ANKRD35Q8N283 1001 aa33.08■■■□□ 2.89
SOD1-203ENST00000470944 BICD2Q8TD16 824 aa33.08■■■□□ 2.89
SOD1-203ENST00000470944 PGBD1Q96JS3 809 aa33.08■■■□□ 2.89
SOD1-203ENST00000470944 BRMS1Q9HCU9 246 aa33.08■■■□□ 2.89
SOD1-203ENST00000470944 BRD1O95696 1058 aa33.08■■■□□ 2.89
SOD1-203ENST00000470944 ZSCAN22P10073 491 aaPredicted RBP33.08■■■□□ 2.89
SOD1-203ENST00000470944 CTGFP29279 349 aa33.08■■■□□ 2.89
SOD1-203ENST00000470944 GPR142Q7Z601 462 aa33.08■■■□□ 2.89
SOD1-203ENST00000470944 GLT8D2Q9H1C3 349 aa33.08■■■□□ 2.89
SOD1-203ENST00000470944 SAGE1Q9NXZ1 904 aa33.08■■■□□ 2.89
SOD1-203ENST00000470944 FAM205CA6NFA0 338 aa33.07■■■□□ 2.88
SOD1-203ENST00000470944 FCHSD1Q86WN1 690 aa33.07■■■□□ 2.88
SOD1-203ENST00000470944 SYTL5Q8TDW5 730 aaPredicted RBP33.07■■■□□ 2.88
SOD1-203ENST00000470944 FOXP1Q9H334 677 aaPredicted RBP33.07■■■□□ 2.88
SOD1-203ENST00000470944 U2AF2P26368 475 aaKnown RBP eCLIP33.06■■■□□ 2.88
SOD1-203ENST00000470944 MAPK4P31152 587 aa33.06■■■□□ 2.88
SOD1-203ENST00000470944 DHX30Q7L2E3 1194 aaKnown RBP eCLIP33.06■■■□□ 2.88
SOD1-203ENST00000470944 TSKSQ9UJT2 592 aa33.06■■■□□ 2.88
SOD1-203ENST00000470944 MMP19Q99542 508 aa33.05■■■□□ 2.88
SOD1-203ENST00000470944 WBP1LQ9NX94 342 aa33.05■■■□□ 2.88
SOD1-203ENST00000470944 FCER1AP12319 257 aa33.05■■■□□ 2.88
SOD1-203ENST00000470944 RESTQ13127 1097 aa33.05■■■□□ 2.88
SOD1-203ENST00000470944 GNL2Q13823 731 aaKnown RBP33.05■■■□□ 2.88
SOD1-203ENST00000470944 ARHGAP39Q9C0H5 1083 aa33.05■■■□□ 2.88
SOD1-203ENST00000470944 RBBP6Q7Z6E9 1792 aaKnown RBP33.04■■■□□ 2.88
SOD1-203ENST00000470944 PDIA4P13667 645 aaKnown RBP33.04■■■□□ 2.88
SOD1-203ENST00000470944 CAP1Q01518 475 aa33.04■■■□□ 2.88
SOD1-203ENST00000470944 KCTD2Q14681 263 aa33.04■■■□□ 2.88
SOD1-203ENST00000470944 PLEKHH3Q7Z736 793 aa33.04■■■□□ 2.88
SOD1-203ENST00000470944 CIZ1Q9ULV3 898 aaPredicted RBP33.04■■■□□ 2.88
SOD1-203ENST00000470944 PGK2P07205 417 aa33.03■■■□□ 2.88
SOD1-203ENST00000470944 LACTBP83111 547 aaPredicted RBP33.03■■■□□ 2.88
SOD1-203ENST00000470944 SP3Q02447 781 aa33.03■■■□□ 2.88
SOD1-203ENST00000470944 NOSTRINQ8IVI9 506 aa33.03■■■□□ 2.88
SOD1-203ENST00000470944 MAP3K20Q9NYL2 800 aaKnown RBP33.03■■■□□ 2.88
SOD1-203ENST00000470944 PFASO15067 1338 aa33.03■■■□□ 2.88
SOD1-203ENST00000470944 GPR25O00155 361 aa33.02■■■□□ 2.88
SOD1-203ENST00000470944 NUCB2P80303 420 aa33.02■■■□□ 2.88
SOD1-203ENST00000470944 CNTN2Q02246 1040 aa33.02■■■□□ 2.88
SOD1-203ENST00000470944 PIK3AP1Q6ZUJ8 805 aa33.02■■■□□ 2.88
SOD1-203ENST00000470944 TAAR1Q96RJ0 339 aa33.02■■■□□ 2.88
SOD1-203ENST00000470944 BEGAINQ9BUH8 593 aa33.02■■■□□ 2.88
SOD1-203ENST00000470944 CHMP5Q9NZZ3 219 aa33.02■■■□□ 2.88
SOD1-203ENST00000470944 F13A1P00488 732 aa33.02■■■□□ 2.88
SOD1-203ENST00000470944 PTPREP23469 700 aa33.02■■■□□ 2.88
SOD1-203ENST00000470944 SAMD3Q8N6K7 520 aa33.02■■■□□ 2.88
SOD1-203ENST00000470944 ANO3Q9BYT9 981 aa33.02■■■□□ 2.88
SOD1-203ENST00000470944 IVNS1ABPQ9Y6Y0 642 aa33.02■■■□□ 2.88
SOD1-203ENST00000470944 SPDYE3A6NKU9 549 aa33.01■■■□□ 2.87
SOD1-203ENST00000470944 FAM173BQ6P4H8 233 aa33.01■■■□□ 2.87
SOD1-203ENST00000470944 TEX2Q8IWB9 1127 aa33.01■■■□□ 2.87
SOD1-203ENST00000470944 DNAJC25-GNG10A0A024R161 153 aa33■■■□□ 2.87
SOD1-203ENST00000470944 STRNO43815 780 aa33■■■□□ 2.87
SOD1-203ENST00000470944 ADORA2AP29274 412 aa33■■■□□ 2.87
SOD1-203ENST00000470944 AP3B2Q13367 1082 aa33■■■□□ 2.87
SOD1-203ENST00000470944 GRB14Q14449 540 aa33■■■□□ 2.87
SOD1-203ENST00000470944 TRIM47Q96LD4 638 aa33■■■□□ 2.87
SOD1-203ENST00000470944 ZSWIM8A7E2V4 1837 aa33■■■□□ 2.87
SOD1-203ENST00000470944 CCDC194A0A1B0GVG4 234 aa32.99■■■□□ 2.87
SOD1-203ENST00000470944 KRT25Q7Z3Z0 450 aa32.99■■■□□ 2.87
SOD1-203ENST00000470944 ABRAQ8N0Z2 381 aa32.99■■■□□ 2.87
SOD1-203ENST00000470944 MAF1Q9H063 256 aa32.99■■■□□ 2.87
SOD1-203ENST00000470944 ASTN1O14525 1302 aa32.99■■■□□ 2.87
SOD1-203ENST00000470944 POTEB2H3BUK9 544 aa32.99■■■□□ 2.87
SOD1-203ENST00000470944 PSMC4P43686 418 aa32.99■■■□□ 2.87
SOD1-203ENST00000470944 UBXN2AP68543 259 aa32.99■■■□□ 2.87
SOD1-203ENST00000470944 FAM133AQ8N9E0 248 aa32.99■■■□□ 2.87
SOD1-203ENST00000470944 PLXNB2O15031 1838 aa32.98■■■□□ 2.87
SOD1-203ENST00000470944 TNPO2O14787 897 aaKnown RBP32.98■■■□□ 2.87
SOD1-203ENST00000470944 COBLO75128 1261 aa32.98■■■□□ 2.87
SOD1-203ENST00000470944 FOSP01100 380 aaPredicted RBP32.98■■■□□ 2.87
SOD1-203ENST00000470944 INF2Q27J81 1249 aa32.98■■■□□ 2.87
SOD1-203ENST00000470944 DDX49Q9Y6V7 483 aaKnown RBP32.98■■■□□ 2.87
SOD1-203ENST00000470944 NONOQ15233 471 aaKnown RBP eCLIP32.97■■■□□ 2.87
SOD1-203ENST00000470944 FOXD4L6Q3SYB3 417 aaPredicted RBP32.97■■■□□ 2.87
SOD1-203ENST00000470944 MORN1Q5T089 497 aa32.97■■■□□ 2.87
SOD1-203ENST00000470944 FOXD4L3Q6VB84 417 aaPredicted RBP32.97■■■□□ 2.87
SOD1-203ENST00000470944 TBCKQ8TEA7 893 aa32.97■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms