RNA–Protein interactions for RNA: ENST00000470537.1

XRN1-208, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-208ENST00000470537 SLF1Q9BQI6 1058 aa10.59□□□□□ -0.71
XRN1-208ENST00000470537 IL23AQ9NPF7 189 aa10.59□□□□□ -0.71
XRN1-208ENST00000470537 NCOR1O75376 2440 aa10.59□□□□□ -0.71
XRN1-208ENST00000470537 A0A0G2JMZ2 1700 aa10.58□□□□□ -0.72
XRN1-208ENST00000470537 USP17L12C9JPN9 530 aa10.58□□□□□ -0.72
XRN1-208ENST00000470537 USP17L21D6R901 530 aa10.58□□□□□ -0.72
XRN1-208ENST00000470537 HMMRO75330 724 aa10.58□□□□□ -0.72
XRN1-208ENST00000470537 SNAI1O95863 264 aaPredicted RBP10.58□□□□□ -0.72
XRN1-208ENST00000470537 OAZ1P54368 228 aa10.58□□□□□ -0.72
XRN1-208ENST00000470537 HIC1Q14526 733 aa10.58□□□□□ -0.72
XRN1-208ENST00000470537 CCDC144BQ3MJ40 725 aa10.58□□□□□ -0.72
XRN1-208ENST00000470537 FAM83BQ5T0W9 1011 aa10.58□□□□□ -0.72
XRN1-208ENST00000470537 NOL8Q76FK4 1167 aaKnown RBP10.58□□□□□ -0.72
XRN1-208ENST00000470537 CHST13Q8NET6 341 aa10.58□□□□□ -0.72
XRN1-208ENST00000470537 KIF1BPQ96EK5 621 aa10.58□□□□□ -0.72
XRN1-208ENST00000470537 DYNLL2Q96FJ2 89 aa10.58□□□□□ -0.72
XRN1-208ENST00000470537 DNAJC2Q99543 621 aaKnown RBP10.58□□□□□ -0.72
XRN1-208ENST00000470537 MKNK2Q9HBH9 465 aa10.58□□□□□ -0.72
XRN1-208ENST00000470537 FBXO28Q9NVF7 368 aa10.58□□□□□ -0.72
XRN1-208ENST00000470537 DNAJC25-GNG10A0A024R161 153 aa10.57□□□□□ -0.72
XRN1-208ENST00000470537 TCRBV5S4A2TA0A5A2 114 aa10.57□□□□□ -0.72
XRN1-208ENST00000470537 F5H6K3 240 aa10.57□□□□□ -0.72
XRN1-208ENST00000470537 MS4A1P11836 297 aa10.57□□□□□ -0.72
XRN1-208ENST00000470537 KLRC3Q07444 240 aa10.57□□□□□ -0.72
XRN1-208ENST00000470537 CCDC85BQ15834 202 aaPredicted RBP10.57□□□□□ -0.72
XRN1-208ENST00000470537 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.57□□□□□ -0.72
XRN1-208ENST00000470537 C16orf59Q7L2K0 433 aa10.57□□□□□ -0.72
XRN1-208ENST00000470537 FAM126BQ8IXS8 530 aa10.57□□□□□ -0.72
XRN1-208ENST00000470537 LCORLQ8N3X6 602 aa10.57□□□□□ -0.72
XRN1-208ENST00000470537 RHPN1Q8TCX5 695 aa10.57□□□□□ -0.72
XRN1-208ENST00000470537 PPP1R12CQ9BZL4 782 aa10.57□□□□□ -0.72
XRN1-208ENST00000470537 AP5M1Q9H0R1 490 aa10.57□□□□□ -0.72
XRN1-208ENST00000470537 UPF3AQ9H1J1 476 aaKnown RBP10.57□□□□□ -0.72
XRN1-208ENST00000470537 HIPK3Q9H422 1215 aa10.57□□□□□ -0.72
XRN1-208ENST00000470537 C1orf115Q9H7X2 142 aa10.57□□□□□ -0.72
XRN1-208ENST00000470537 ARMT1Q9H993 441 aa10.57□□□□□ -0.72
XRN1-208ENST00000470537 CXXC1Q9P0U4 656 aaPredicted RBP10.57□□□□□ -0.72
XRN1-208ENST00000470537 NYAP2Q9P242 653 aa10.57□□□□□ -0.72
XRN1-208ENST00000470537 SYNPO2Q9UMS6 1093 aa10.57□□□□□ -0.72
XRN1-208ENST00000470537 EXOC6BQ9Y2D4 811 aa10.57□□□□□ -0.72
XRN1-208ENST00000470537 SLC4A7Q9Y6M7 1214 aa10.57□□□□□ -0.72
XRN1-208ENST00000470537 PLXNA1Q9UIW2 1896 aa10.57□□□□□ -0.72
XRN1-208ENST00000470537 NAV1Q8NEY1 1877 aa10.56□□□□□ -0.72
XRN1-208ENST00000470537 ASB14A6NK59 587 aa10.56□□□□□ -0.72
XRN1-208ENST00000470537 RAB11FIP3O75154 756 aa10.56□□□□□ -0.72
XRN1-208ENST00000470537 MBD4O95243 580 aa10.56□□□□□ -0.72
XRN1-208ENST00000470537 PFKMP08237 780 aa10.56□□□□□ -0.72
XRN1-208ENST00000470537 SUPT20HL2P0C7V6 817 aa10.56□□□□□ -0.72
XRN1-208ENST00000470537 ACRP10323 421 aa10.56□□□□□ -0.72
XRN1-208ENST00000470537 CYP2D6P10635 497 aa10.56□□□□□ -0.72
XRN1-208ENST00000470537 ADD2P35612 726 aa10.56□□□□□ -0.72
XRN1-208ENST00000470537 NKX3-2P78367 333 aa10.56□□□□□ -0.72
XRN1-208ENST00000470537 TNFAIP2Q03169 654 aa10.56□□□□□ -0.72
XRN1-208ENST00000470537 UBE3CQ15386 1083 aa10.56□□□□□ -0.72
XRN1-208ENST00000470537 CEP85Q6P2H3 762 aa10.56□□□□□ -0.72
XRN1-208ENST00000470537 CPXCR1Q8N123 301 aa10.56□□□□□ -0.72
XRN1-208ENST00000470537 REPS2Q8NFH8 660 aa10.56□□□□□ -0.72
XRN1-208ENST00000470537 CHMP4BQ9H444 224 aaKnown RBP10.56□□□□□ -0.72
XRN1-208ENST00000470537 IL1RAPL2Q9NP60 686 aa10.56□□□□□ -0.72
XRN1-208ENST00000470537 PAG1Q9NWQ8 432 aa10.56□□□□□ -0.72
XRN1-208ENST00000470537 ARPP21Q9UBL0 812 aaPredicted RBP10.56□□□□□ -0.72
XRN1-208ENST00000470537 FEM1BQ9UK73 627 aa10.56□□□□□ -0.72
XRN1-208ENST00000470537 HCN4Q9Y3Q4 1203 aa10.56□□□□□ -0.72
XRN1-208ENST00000470537 PCDHA11Q9Y5I1 949 aa10.56□□□□□ -0.72
XRN1-208ENST00000470537 SLC4A4Q9Y6R1 1079 aa10.56□□□□□ -0.72
XRN1-208ENST00000470537 MYH8P13535 1937 aa10.56□□□□□ -0.72
XRN1-208ENST00000470537 BDP1A6H8Y1 2624 aa10.55□□□□□ -0.72
XRN1-208ENST00000470537 GRXCR1A8MXD5 290 aa10.55□□□□□ -0.72
XRN1-208ENST00000470537 CD4P01730 458 aa10.55□□□□□ -0.72
XRN1-208ENST00000470537 ACTN1P12814 892 aa10.55□□□□□ -0.72
XRN1-208ENST00000470537 FOXC1Q12948 553 aa10.55□□□□□ -0.72
XRN1-208ENST00000470537 ITGA7Q13683 1181 aa10.55□□□□□ -0.72
XRN1-208ENST00000470537 SKIV2LQ15477 1246 aaKnown RBP10.55□□□□□ -0.72
XRN1-208ENST00000470537 PPP2R2DQ66LE6 453 aa10.55□□□□□ -0.72
XRN1-208ENST00000470537 GIMAP6Q6P9H5 292 aa10.55□□□□□ -0.72
XRN1-208ENST00000470537 ARMCX2Q7L311 632 aa10.55□□□□□ -0.72
XRN1-208ENST00000470537 CLEC10AQ8IUN9 316 aa10.55□□□□□ -0.72
XRN1-208ENST00000470537 RPAP2Q8IXW5 612 aaPredicted RBP10.55□□□□□ -0.72
XRN1-208ENST00000470537 ZNF444Q8N0Y2 327 aaPredicted RBP10.55□□□□□ -0.72
XRN1-208ENST00000470537 RDH13Q8NBN7 331 aa10.55□□□□□ -0.72
XRN1-208ENST00000470537 LENG1Q96BZ8 264 aaPredicted RBP10.55□□□□□ -0.72
XRN1-208ENST00000470537 COG5Q9UP83 839 aa10.55□□□□□ -0.72
XRN1-208ENST00000470537 TNNQ9UQP3 1299 aa10.55□□□□□ -0.72
XRN1-208ENST00000470537 Q9Y3F1 56 aa10.55□□□□□ -0.72
XRN1-208ENST00000470537 CHD9Q3L8U1 2897 aa10.54□□□□□ -0.72
XRN1-208ENST00000470537 KIF28PB7ZC32 967 aa10.54□□□□□ -0.72
XRN1-208ENST00000470537 CCER2I3L3R5 266 aa10.54□□□□□ -0.72
XRN1-208ENST00000470537 ST8SIA5O15466 376 aa10.54□□□□□ -0.72
XRN1-208ENST00000470537 PRKAB2O43741 272 aa10.54□□□□□ -0.72
XRN1-208ENST00000470537 ATP5JP18859 108 aa10.54□□□□□ -0.72
XRN1-208ENST00000470537 CYP2C18P33260 490 aa10.54□□□□□ -0.72
XRN1-208ENST00000470537 FSCN1Q16658 493 aaKnown RBP10.54□□□□□ -0.72
XRN1-208ENST00000470537 IQSEC1Q6DN90 963 aa10.54□□□□□ -0.72
XRN1-208ENST00000470537 CTR9Q6PD62 1173 aa10.54□□□□□ -0.72
XRN1-208ENST00000470537 OTOP2Q7RTS6 562 aa10.54□□□□□ -0.72
XRN1-208ENST00000470537 CCDC144CPQ8IYA2 1237 aa10.54□□□□□ -0.72
XRN1-208ENST00000470537 CHURC1Q8WUH1 139 aa10.54□□□□□ -0.72
XRN1-208ENST00000470537 KIFC2Q96AC6 838 aa10.54□□□□□ -0.72
XRN1-208ENST00000470537 NKX2-4Q9H2Z4 354 aa10.54□□□□□ -0.72
XRN1-208ENST00000470537 SLC38A10Q9HBR0 1119 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms