RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 SDHBP21912 280 aa6.08□□□□□ -1.44
BRCA2-202ENST00000470094 GFRA1P56159 465 aa6.08□□□□□ -1.44
BRCA2-202ENST00000470094 E4F1Q66K89 784 aaPredicted RBP6.08□□□□□ -1.44
BRCA2-202ENST00000470094 BICRALQ6AI39 1079 aa6.08□□□□□ -1.44
BRCA2-202ENST00000470094 IQCEQ6IPM2 695 aa6.08□□□□□ -1.44
BRCA2-202ENST00000470094 KRTAP19-1Q8IUB9 90 aa6.08□□□□□ -1.44
BRCA2-202ENST00000470094 NPLOC4Q8TAT6 608 aa6.08□□□□□ -1.44
BRCA2-202ENST00000470094 FRS2Q8WU20 508 aa6.08□□□□□ -1.44
BRCA2-202ENST00000470094 SLC26A8Q96RN1 970 aa6.08□□□□□ -1.44
BRCA2-202ENST00000470094 AARSD1Q9BTE6 412 aaKnown RBP6.08□□□□□ -1.44
BRCA2-202ENST00000470094 IER2Q9BTL4 223 aa6.08□□□□□ -1.44
BRCA2-202ENST00000470094 ZNF552Q9H707 407 aaPredicted RBP6.08□□□□□ -1.44
BRCA2-202ENST00000470094 TNFRSF12AQ9NP84 129 aa6.08□□□□□ -1.44
BRCA2-202ENST00000470094 C7orf72A4D263 438 aa6.07□□□□□ -1.44
BRCA2-202ENST00000470094 ABLIM1O14639 778 aa6.07□□□□□ -1.44
BRCA2-202ENST00000470094 TACR1P25103 407 aa6.07□□□□□ -1.44
BRCA2-202ENST00000470094 GRIA2P42262 883 aa6.07□□□□□ -1.44
BRCA2-202ENST00000470094 CYP4F3Q08477 520 aa6.07□□□□□ -1.44
BRCA2-202ENST00000470094 TMEM62Q0P6H9 643 aa6.07□□□□□ -1.44
BRCA2-202ENST00000470094 MESP2Q0VG99 397 aa6.07□□□□□ -1.44
BRCA2-202ENST00000470094 IFRD2Q12894 506 aaPredicted RBP6.07□□□□□ -1.44
BRCA2-202ENST00000470094 KCNAB2Q13303 367 aa6.07□□□□□ -1.44
BRCA2-202ENST00000470094 RAB3GAP1Q15042 981 aa6.07□□□□□ -1.44
BRCA2-202ENST00000470094 SF1Q15637 639 aaKnown RBP6.07□□□□□ -1.44
BRCA2-202ENST00000470094 PKN1Q16512 942 aa6.07□□□□□ -1.44
BRCA2-202ENST00000470094 PRSS53Q2L4Q9 553 aa6.07□□□□□ -1.44
BRCA2-202ENST00000470094 TMEM132EQ6IEE7 984 aa6.07□□□□□ -1.44
BRCA2-202ENST00000470094 SYDE1Q6ZW31 735 aaPredicted RBP6.07□□□□□ -1.44
BRCA2-202ENST00000470094 CABP7Q86V35 215 aa6.07□□□□□ -1.44
BRCA2-202ENST00000470094 PPIL6Q8IXY8 311 aa6.07□□□□□ -1.44
BRCA2-202ENST00000470094 LZTR1Q8N653 840 aa6.07□□□□□ -1.44
BRCA2-202ENST00000470094 TMEM145Q8NBT3 493 aa6.07□□□□□ -1.44
BRCA2-202ENST00000470094 KCTD13Q8WZ19 329 aa6.07□□□□□ -1.44
BRCA2-202ENST00000470094 DEPDC7Q96QD5 511 aa6.07□□□□□ -1.44
BRCA2-202ENST00000470094 PPP1R16BQ96T49 567 aa6.07□□□□□ -1.44
BRCA2-202ENST00000470094 KCNK12Q9HB15 430 aa6.07□□□□□ -1.44
BRCA2-202ENST00000470094 PFDN2Q9UHV9 154 aa6.07□□□□□ -1.44
BRCA2-202ENST00000470094 RWDD3Q9Y3V2 267 aa6.07□□□□□ -1.44
BRCA2-202ENST00000470094 TRAV20A0A0B4J274 112 aa6.06□□□□□ -1.44
BRCA2-202ENST00000470094 NUDT19A8MXV4 375 aa6.06□□□□□ -1.44
BRCA2-202ENST00000470094 HRKO00198 91 aa6.06□□□□□ -1.44
BRCA2-202ENST00000470094 PEX10O60683 326 aa6.06□□□□□ -1.44
BRCA2-202ENST00000470094 SSRP1Q08945 709 aaKnown RBP6.06□□□□□ -1.44
BRCA2-202ENST00000470094 MAP4K2Q12851 820 aa6.06□□□□□ -1.44
BRCA2-202ENST00000470094 RASA3Q14644 834 aa6.06□□□□□ -1.44
BRCA2-202ENST00000470094 NR1I3Q14994 352 aa6.06□□□□□ -1.44
BRCA2-202ENST00000470094 ACBD5Q5T8D3 534 aaPredicted RBP6.06□□□□□ -1.44
BRCA2-202ENST00000470094 MBLAC2Q68D91 279 aa6.06□□□□□ -1.44
BRCA2-202ENST00000470094 SPATC1Q76KD6 591 aa6.06□□□□□ -1.44
BRCA2-202ENST00000470094 LRP10Q7Z4F1 713 aa6.06□□□□□ -1.44
BRCA2-202ENST00000470094 USP33Q8TEY7 942 aa6.06□□□□□ -1.44
BRCA2-202ENST00000470094 UBXN4Q92575 508 aa6.06□□□□□ -1.44
BRCA2-202ENST00000470094 DIO2Q92813 273 aa6.06□□□□□ -1.44
BRCA2-202ENST00000470094 SRPK1Q96SB4 655 aaKnown RBP6.06□□□□□ -1.44
BRCA2-202ENST00000470094 SPATA9Q9BWV2 254 aa6.06□□□□□ -1.44
BRCA2-202ENST00000470094 ARHGEF4Q9NR80 690 aa6.06□□□□□ -1.44
BRCA2-202ENST00000470094 SNTG2Q9NY99 539 aa6.06□□□□□ -1.44
BRCA2-202ENST00000470094 GULP1Q9UBP9 304 aa6.06□□□□□ -1.44
BRCA2-202ENST00000470094 SRGAP3O43295 1099 aa6.05□□□□□ -1.44
BRCA2-202ENST00000470094 MYO1BO43795 1136 aa6.05□□□□□ -1.44
BRCA2-202ENST00000470094 CAPNS1P04632 268 aa6.05□□□□□ -1.44
BRCA2-202ENST00000470094 CYBBP04839 570 aa6.05□□□□□ -1.44
BRCA2-202ENST00000470094 YBX3P16989 372 aaKnown RBP eCLIP6.05□□□□□ -1.44
BRCA2-202ENST00000470094 INF2Q27J81 1249 aa6.05□□□□□ -1.44
BRCA2-202ENST00000470094 SLC35F1Q5T1Q4 408 aa6.05□□□□□ -1.44
BRCA2-202ENST00000470094 PAQR3Q6TCH7 311 aa6.05□□□□□ -1.44
BRCA2-202ENST00000470094 KREMEN2Q8NCW0 462 aa6.05□□□□□ -1.44
BRCA2-202ENST00000470094 BHLHE22Q8NFJ8 381 aaPredicted RBP6.05□□□□□ -1.44
BRCA2-202ENST00000470094 KCNN1Q92952 543 aa6.05□□□□□ -1.44
BRCA2-202ENST00000470094 MKL1Q969V6 931 aa6.05□□□□□ -1.44
BRCA2-202ENST00000470094 MCOLN1Q9GZU1 580 aa6.05□□□□□ -1.44
BRCA2-202ENST00000470094 SIRT5Q9NXA8 310 aa6.05□□□□□ -1.44
BRCA2-202ENST00000470094 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.05□□□□□ -1.44
BRCA2-202ENST00000470094 KLHL14Q9P2G3 628 aa6.05□□□□□ -1.44
BRCA2-202ENST00000470094 MYOCOSA0A1B0GUC4 107 aa6.04□□□□□ -1.44
BRCA2-202ENST00000470094 NFIBO00712 420 aa6.04□□□□□ -1.44
BRCA2-202ENST00000470094 PRODHO43272 600 aa6.04□□□□□ -1.44
BRCA2-202ENST00000470094 SEMA7AO75326 666 aa6.04□□□□□ -1.44
BRCA2-202ENST00000470094 C8AP07357 584 aa6.04□□□□□ -1.44
BRCA2-202ENST00000470094 DBHP09172 617 aa6.04□□□□□ -1.44
BRCA2-202ENST00000470094 TMEM253P0C7T8 217 aa6.04□□□□□ -1.44
BRCA2-202ENST00000470094 FGFR1P11362 822 aa6.04□□□□□ -1.44
BRCA2-202ENST00000470094 VIPR1P32241 457 aa6.04□□□□□ -1.44
BRCA2-202ENST00000470094 LTBRP36941 435 aa6.04□□□□□ -1.44
BRCA2-202ENST00000470094 RANGAP1P46060 587 aaPredicted RBP6.04□□□□□ -1.44
BRCA2-202ENST00000470094 RPL11P62913 178 aaKnown RBP6.04□□□□□ -1.44
BRCA2-202ENST00000470094 YBX1P67809 324 aaKnown RBP6.04□□□□□ -1.44
BRCA2-202ENST00000470094 SRSF3P84103 164 aaKnown RBP6.04□□□□□ -1.44
BRCA2-202ENST00000470094 NSMFQ6X4W1 530 aa6.04□□□□□ -1.44
BRCA2-202ENST00000470094 RPTNQ6XPR3 784 aa6.04□□□□□ -1.44
BRCA2-202ENST00000470094 CCDC103Q8IW40 242 aa6.04□□□□□ -1.44
BRCA2-202ENST00000470094 C1orf159Q96HA4 380 aa6.04□□□□□ -1.44
BRCA2-202ENST00000470094 OSBPL2Q9H1P3 480 aa6.04□□□□□ -1.44
BRCA2-202ENST00000470094 BTG4Q9NY30 223 aa6.04□□□□□ -1.44
BRCA2-202ENST00000470094 MARCH2Q9P0N8 246 aa6.04□□□□□ -1.44
BRCA2-202ENST00000470094 TMEFF2Q9UIK5 374 aaPredicted RBP6.04□□□□□ -1.44
BRCA2-202ENST00000470094 DBR1Q9UK59 544 aaKnown RBP6.04□□□□□ -1.44
BRCA2-202ENST00000470094 TIMM13Q9Y5L4 95 aaPredicted RBP6.04□□□□□ -1.44
BRCA2-202ENST00000470094 TEX51A0A1B0GUA7 166 aa6.03□□□□□ -1.44
BRCA2-202ENST00000470094 FAM221BA6H8Z2 402 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms