RNA–Protein interactions for RNA: ENST00000469443.2

PHGDH-204, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-204ENST00000469443 TAPT1Q6NXT6 567 aa21.29■■□□□ 1
PHGDH-204ENST00000469443 NOL8Q76FK4 1167 aaKnown RBP21.29■■□□□ 1
PHGDH-204ENST00000469443 EEPD1Q7L9B9 569 aa21.29■■□□□ 1
PHGDH-204ENST00000469443 NUP133Q8WUM0 1156 aa21.29■■□□□ 1
PHGDH-204ENST00000469443 PRKAG2Q9UGJ0 569 aa21.29■■□□□ 1
PHGDH-204ENST00000469443 GNEQ9Y223 722 aaKnown RBP21.29■■□□□ 1
PHGDH-204ENST00000469443 NKX3-2P78367 333 aa21.28■■□□□ 1
PHGDH-204ENST00000469443 IRX5P78411 483 aaPredicted RBP21.28■■□□□ 1
PHGDH-204ENST00000469443 TROAPQ12815 778 aa21.28■■□□□ 1
PHGDH-204ENST00000469443 NECTIN1Q15223 517 aa21.28■■□□□ 1
PHGDH-204ENST00000469443 GNASQ5JWF2 1037 aa21.28■■□□□ 1
PHGDH-204ENST00000469443 CREB3L3Q68CJ9 461 aa21.28■■□□□ 1
PHGDH-204ENST00000469443 DNERQ8NFT8 737 aa21.28■■□□□ 1
PHGDH-204ENST00000469443 IGDCC4Q8TDY8 1250 aa21.28■■□□□ 1
PHGDH-204ENST00000469443 MTMR8Q96EF0 704 aa21.28■■□□□ 1
PHGDH-204ENST00000469443 MPHOSPH6Q99547 160 aaKnown RBP21.28■■□□□ 1
PHGDH-204ENST00000469443 MTA3Q9BTC8 594 aa21.28■■□□□ 1
PHGDH-204ENST00000469443 STARD7Q9NQZ5 370 aa21.28■■□□□ 1
PHGDH-204ENST00000469443 PDGFCQ9NRA1 345 aa21.28■■□□□ 1
PHGDH-204ENST00000469443 SMPD1P17405 629 aa21.27■■□□□ 1
PHGDH-204ENST00000469443 TLE2Q04725 743 aa21.27■■□□□ 1
PHGDH-204ENST00000469443 CASC1Q6TDU7 716 aa21.27■■□□□ 1
PHGDH-204ENST00000469443 CATIPQ7Z7H3 387 aa21.27■■□□□ 1
PHGDH-204ENST00000469443 AMNQ9BXJ7 453 aa21.27■■□□□ 1
PHGDH-204ENST00000469443 PCDH10Q9P2E7 1040 aa21.27■■□□□ 1
PHGDH-204ENST00000469443 MRPL11Q9Y3B7 192 aaKnown RBP21.27■■□□□ 1
PHGDH-204ENST00000469443 CTAGE5O15320 804 aa21.26■□□□□ 0.99
PHGDH-204ENST00000469443 PRC1O43663 620 aa21.26■□□□□ 0.99
PHGDH-204ENST00000469443 CDC45O75419 566 aa21.26■□□□□ 0.99
PHGDH-204ENST00000469443 NEFLP07196 543 aa21.26■□□□□ 0.99
PHGDH-204ENST00000469443 ASGR1P07306 291 aa21.26■□□□□ 0.99
PHGDH-204ENST00000469443 MCM5P33992 734 aa21.26■□□□□ 0.99
PHGDH-204ENST00000469443 MDM2Q00987 491 aaPredicted RBP21.26■□□□□ 0.99
PHGDH-204ENST00000469443 TLK2Q86UE8 772 aa21.26■□□□□ 0.99
PHGDH-204ENST00000469443 MCF2L2Q86YR7 1114 aa21.26■□□□□ 0.99
PHGDH-204ENST00000469443 TBC1D5Q92609 795 aa21.26■□□□□ 0.99
PHGDH-204ENST00000469443 GLT1D1Q96MS3 346 aa21.26■□□□□ 0.99
PHGDH-204ENST00000469443 LBHD1Q9BQE6 289 aaPredicted RBP21.26■□□□□ 0.99
PHGDH-204ENST00000469443 UBE2OQ9C0C9 1292 aaKnown RBP21.26■□□□□ 0.99
PHGDH-204ENST00000469443 AP5M1Q9H0R1 490 aa21.26■□□□□ 0.99
PHGDH-204ENST00000469443 Q9Y3F1 56 aa21.26■□□□□ 0.99
PHGDH-204ENST00000469443 B4DLN1 442 aa21.25■□□□□ 0.99
PHGDH-204ENST00000469443 ZBTB5O15062 677 aa21.25■□□□□ 0.99
PHGDH-204ENST00000469443 EDNRBP24530 442 aa21.25■□□□□ 0.99
PHGDH-204ENST00000469443 MRPL12P52815 198 aaKnown RBP21.25■□□□□ 0.99
PHGDH-204ENST00000469443 PDE4DQ08499 809 aa21.25■□□□□ 0.99
PHGDH-204ENST00000469443 RIOX1Q9H6W3 641 aa21.25■□□□□ 0.99
PHGDH-204ENST00000469443 LY9Q9HBG7 655 aa21.25■□□□□ 0.99
PHGDH-204ENST00000469443 PDLIM7Q9NR12 457 aa21.25■□□□□ 0.99
PHGDH-204ENST00000469443 ELP1O95163 1332 aa21.25■□□□□ 0.99
PHGDH-204ENST00000469443 RBM47A0AV96 593 aaKnown RBP21.24■□□□□ 0.99
PHGDH-204ENST00000469443 DYNC1LI2O43237 492 aaPredicted RBP21.24■□□□□ 0.99
PHGDH-204ENST00000469443 BEX3Q00994 111 aa21.24■□□□□ 0.99
PHGDH-204ENST00000469443 SLC35G1Q2M3R5 365 aa21.24■□□□□ 0.99
PHGDH-204ENST00000469443 RNF20Q5VTR2 975 aa21.24■□□□□ 0.99
PHGDH-204ENST00000469443 SYTL5Q8TDW5 730 aaPredicted RBP21.24■□□□□ 0.99
PHGDH-204ENST00000469443 TMEM87BQ96K49 555 aa21.24■□□□□ 0.99
PHGDH-204ENST00000469443 MAP3K14Q99558 947 aa21.24■□□□□ 0.99
PHGDH-204ENST00000469443 WDR11Q9BZH6 1224 aa21.24■□□□□ 0.99
PHGDH-204ENST00000469443 PRDM5Q9NQX1 630 aaPredicted RBP21.24■□□□□ 0.99
PHGDH-204ENST00000469443 GPHNQ9NQX3 736 aaPredicted RBP21.24■□□□□ 0.99
PHGDH-204ENST00000469443 MYH7BA7E2Y1 1941 aa21.23■□□□□ 0.99
PHGDH-204ENST00000469443 PPP1R11O60927 126 aaPredicted RBP21.23■□□□□ 0.99
PHGDH-204ENST00000469443 FSCN1Q16658 493 aaKnown RBP21.23■□□□□ 0.99
PHGDH-204ENST00000469443 DUSP28Q4G0W2 176 aa21.23■□□□□ 0.99
PHGDH-204ENST00000469443 TMEM63BQ5T3F8 832 aa21.23■□□□□ 0.99
PHGDH-204ENST00000469443 HOMER1Q86YM7 354 aa21.23■□□□□ 0.99
PHGDH-204ENST00000469443 TDHQ8IZJ6 230 aa21.23■□□□□ 0.99
PHGDH-204ENST00000469443 ZNF654Q8IZM8 581 aa21.23■□□□□ 0.99
PHGDH-204ENST00000469443 TMTC2Q8N394 836 aa21.23■□□□□ 0.99
PHGDH-204ENST00000469443 TOX2Q96NM4 488 aa21.23■□□□□ 0.99
PHGDH-204ENST00000469443 PCDHA1Q9Y5I3 950 aa21.23■□□□□ 0.99
PHGDH-204ENST00000469443 LAMA3Q16787 3333 aa21.22■□□□□ 0.99
PHGDH-204ENST00000469443 SH2B2O14492 632 aaPredicted RBP21.22■□□□□ 0.99
PHGDH-204ENST00000469443 CYTH3O43739 400 aa21.22■□□□□ 0.99
PHGDH-204ENST00000469443 PQBP1O60828 265 aaKnown RBP21.22■□□□□ 0.99
PHGDH-204ENST00000469443 DDAH1O94760 285 aa21.22■□□□□ 0.99
PHGDH-204ENST00000469443 CLTBP09497 229 aa21.22■□□□□ 0.99
PHGDH-204ENST00000469443 PTGS1P23219 599 aa21.22■□□□□ 0.99
PHGDH-204ENST00000469443 TRAF1Q13077 416 aa21.22■□□□□ 0.99
PHGDH-204ENST00000469443 ANKRD33Q7Z3H0 272 aa21.22■□□□□ 0.99
PHGDH-204ENST00000469443 SH3RF1Q7Z6J0 888 aa21.22■□□□□ 0.99
PHGDH-204ENST00000469443 VTI1AQ96AJ9 217 aa21.22■□□□□ 0.99
PHGDH-204ENST00000469443 TAAR1Q96RJ0 339 aa21.22■□□□□ 0.99
PHGDH-204ENST00000469443 PIGSQ96S52 555 aa21.22■□□□□ 0.99
PHGDH-204ENST00000469443 COL20A1Q9P218 1284 aa21.22■□□□□ 0.99
PHGDH-204ENST00000469443 SZT2Q5T011 3432 aa21.21■□□□□ 0.99
PHGDH-204ENST00000469443 A0A0U1RQG5 324 aaPredicted RBP21.21■□□□□ 0.99
PHGDH-204ENST00000469443 TRIM43BA6NCK2 446 aa21.21■□□□□ 0.99
PHGDH-204ENST00000469443 OPLAHO14841 1288 aa21.21■□□□□ 0.99
PHGDH-204ENST00000469443 ZEB2O60315 1214 aa21.21■□□□□ 0.99
PHGDH-204ENST00000469443 CABYRO75952 493 aa21.21■□□□□ 0.99
PHGDH-204ENST00000469443 CFBP00751 764 aa21.21■□□□□ 0.99
PHGDH-204ENST00000469443 LIFRP42702 1097 aa21.21■□□□□ 0.99
PHGDH-204ENST00000469443 GHRHRQ02643 423 aa21.21■□□□□ 0.99
PHGDH-204ENST00000469443 COL9A3Q14050 684 aaPredicted RBP21.21■□□□□ 0.99
PHGDH-204ENST00000469443 NFXL1Q6ZNB6 911 aa21.21■□□□□ 0.99
PHGDH-204ENST00000469443 CTCFLQ8NI51 663 aaPredicted RBP21.21■□□□□ 0.99
PHGDH-204ENST00000469443 NSUN6Q8TEA1 469 aaKnown RBP21.21■□□□□ 0.99
PHGDH-204ENST00000469443 SCFD2Q8WU76 684 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms