RNA–Protein interactions for RNA: ENST00000469356.3

SREBF1-208, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-208ENST00000469356 MPHOSPH6Q99547 160 aaKnown RBP26.39■■□□□ 1.82
SREBF1-208ENST00000469356 ALG1Q9BT22 464 aa26.39■■□□□ 1.82
SREBF1-208ENST00000469356 DIS3Q9Y2L1 958 aaKnown RBP26.39■■□□□ 1.82
SREBF1-208ENST00000469356 SMCO2A6NFE2 343 aa26.39■■□□□ 1.81
SREBF1-208ENST00000469356 B4DLN1 442 aa26.39■■□□□ 1.81
SREBF1-208ENST00000469356 CTGFP29279 349 aa26.39■■□□□ 1.81
SREBF1-208ENST00000469356 ST3GAL1Q11201 340 aa26.39■■□□□ 1.81
SREBF1-208ENST00000469356 PKN2Q16513 984 aaKnown RBP26.39■■□□□ 1.81
SREBF1-208ENST00000469356 MCTP2Q6DN12 878 aa26.39■■□□□ 1.81
SREBF1-208ENST00000469356 OTOP1Q7RTM1 612 aa26.39■■□□□ 1.81
SREBF1-208ENST00000469356 RAET1EQ8TD07 263 aa26.39■■□□□ 1.81
SREBF1-208ENST00000469356 INTS4Q96HW7 963 aaKnown RBP26.39■■□□□ 1.81
SREBF1-208ENST00000469356 CYP39A1Q9NYL5 469 aa26.39■■□□□ 1.81
SREBF1-208ENST00000469356 ADD3Q9UEY8 706 aaKnown RBP26.39■■□□□ 1.81
SREBF1-208ENST00000469356 GJD2Q9UKL4 321 aa26.39■■□□□ 1.81
SREBF1-208ENST00000469356 ZNF236Q9UL36 1845 aa26.38■■□□□ 1.81
SREBF1-208ENST00000469356 ESYT2A0FGR8 921 aa26.38■■□□□ 1.81
SREBF1-208ENST00000469356 JAK2O60674 1132 aa26.38■■□□□ 1.81
SREBF1-208ENST00000469356 XRCC5P13010 732 aaKnown RBP26.38■■□□□ 1.81
SREBF1-208ENST00000469356 CALML3P27482 149 aa26.38■■□□□ 1.81
SREBF1-208ENST00000469356 FLT3LGP49771 235 aa26.38■■□□□ 1.81
SREBF1-208ENST00000469356 ADCY7P51828 1080 aa26.38■■□□□ 1.81
SREBF1-208ENST00000469356 NLRP5P59047 1200 aa26.38■■□□□ 1.81
SREBF1-208ENST00000469356 GHRHRQ02643 423 aa26.38■■□□□ 1.81
SREBF1-208ENST00000469356 IRF5Q13568 498 aa26.38■■□□□ 1.81
SREBF1-208ENST00000469356 BAATQ14032 418 aaPredicted RBP26.38■■□□□ 1.81
SREBF1-208ENST00000469356 GALNT17Q6IS24 598 aa26.38■■□□□ 1.81
SREBF1-208ENST00000469356 PCNTO95613 3336 aa26.37■■□□□ 1.81
SREBF1-208ENST00000469356 RBBP6Q7Z6E9 1792 aaKnown RBP26.37■■□□□ 1.81
SREBF1-208ENST00000469356 HOXC6P09630 235 aa26.37■■□□□ 1.81
SREBF1-208ENST00000469356 TAL1P17542 331 aaPredicted RBP26.37■■□□□ 1.81
SREBF1-208ENST00000469356 RPS6P62753 249 aaKnown RBP26.37■■□□□ 1.81
SREBF1-208ENST00000469356 APBA2Q99767 749 aa26.37■■□□□ 1.81
SREBF1-208ENST00000469356 RIC8AQ9NPQ8 531 aa26.37■■□□□ 1.81
SREBF1-208ENST00000469356 FDPSP14324 419 aaKnown RBP26.36■■□□□ 1.81
SREBF1-208ENST00000469356 PRKCZQ05513 592 aa26.36■■□□□ 1.81
SREBF1-208ENST00000469356 USP6NLQ92738 828 aa26.36■■□□□ 1.81
SREBF1-208ENST00000469356 ZMYND12Q9H0C1 365 aa26.36■■□□□ 1.81
SREBF1-208ENST00000469356 EHMT1Q9H9B1 1298 aa26.36■■□□□ 1.81
SREBF1-208ENST00000469356 BRMS1Q9HCU9 246 aa26.36■■□□□ 1.81
SREBF1-208ENST00000469356 VPS54Q9P1Q0 977 aa26.36■■□□□ 1.81
SREBF1-208ENST00000469356 DNAJC25-GNG10A0A024R161 153 aa26.35■■□□□ 1.81
SREBF1-208ENST00000469356 LOC102724159A0A0B4J2E5 919 aa26.35■■□□□ 1.81
SREBF1-208ENST00000469356 PIK3CDO00329 1044 aa26.35■■□□□ 1.81
SREBF1-208ENST00000469356 CYP2B6P20813 491 aa26.35■■□□□ 1.81
SREBF1-208ENST00000469356 HSD17B4P51659 736 aa26.35■■□□□ 1.81
SREBF1-208ENST00000469356 PWP2Q15269 919 aaKnown RBP26.35■■□□□ 1.81
SREBF1-208ENST00000469356 DNERQ8NFT8 737 aa26.35■■□□□ 1.81
SREBF1-208ENST00000469356 ZSWIM8A7E2V4 1837 aa26.34■■□□□ 1.81
SREBF1-208ENST00000469356 FOSP01100 380 aaPredicted RBP26.34■■□□□ 1.81
SREBF1-208ENST00000469356 PGK2P07205 417 aa26.34■■□□□ 1.81
SREBF1-208ENST00000469356 ZNF792Q3KQV3 632 aa26.34■■□□□ 1.81
SREBF1-208ENST00000469356 ZNF467Q7Z7K2 595 aaPredicted RBP26.34■■□□□ 1.81
SREBF1-208ENST00000469356 MSL3Q8N5Y2 521 aaKnown RBP26.34■■□□□ 1.81
SREBF1-208ENST00000469356 GABRQQ9UN88 632 aa26.34■■□□□ 1.81
SREBF1-208ENST00000469356 PLXNA1Q9UIW2 1896 aa26.33■■□□□ 1.81
SREBF1-208ENST00000469356 SPDYE3A6NKU9 549 aa26.33■■□□□ 1.81
SREBF1-208ENST00000469356 GJB2P29033 226 aa26.33■■□□□ 1.81
SREBF1-208ENST00000469356 ANP32AP39687 249 aaKnown RBP26.33■■□□□ 1.81
SREBF1-208ENST00000469356 FAM133AQ8N9E0 248 aa26.33■■□□□ 1.81
SREBF1-208ENST00000469356 SYTL5Q8TDW5 730 aaPredicted RBP26.33■■□□□ 1.81
SREBF1-208ENST00000469356 C8orf76Q96K31 380 aa26.33■■□□□ 1.81
SREBF1-208ENST00000469356 PTPN22Q9Y2R2 807 aa26.33■■□□□ 1.81
SREBF1-208ENST00000469356 ASB14A6NK59 587 aa26.32■■□□□ 1.8
SREBF1-208ENST00000469356 OPLAHO14841 1288 aa26.32■■□□□ 1.8
SREBF1-208ENST00000469356 COBLO75128 1261 aa26.32■■□□□ 1.8
SREBF1-208ENST00000469356 SAFBQ15424 915 aaKnown RBP eCLIP26.32■■□□□ 1.8
SREBF1-208ENST00000469356 SLC30A10Q6XR72 485 aa26.32■■□□□ 1.8
SREBF1-208ENST00000469356 SLAIN1Q8ND83 568 aa26.32■■□□□ 1.8
SREBF1-208ENST00000469356 PXYLP1Q8TE99 480 aa26.32■■□□□ 1.8
SREBF1-208ENST00000469356 NSUN6Q8TEA1 469 aaKnown RBP26.32■■□□□ 1.8
SREBF1-208ENST00000469356 TBC1D5Q92609 795 aa26.32■■□□□ 1.8
SREBF1-208ENST00000469356 ADCY3O60266 1144 aa26.31■■□□□ 1.8
SREBF1-208ENST00000469356 PDCP20941 246 aa26.31■■□□□ 1.8
SREBF1-208ENST00000469356 AP3B2Q13367 1082 aa26.31■■□□□ 1.8
SREBF1-208ENST00000469356 OLFML2BQ68BL8 750 aa26.31■■□□□ 1.8
SREBF1-208ENST00000469356 TYW1BQ6NUM6 668 aa26.31■■□□□ 1.8
SREBF1-208ENST00000469356 REXO1Q8N1G1 1221 aaKnown RBP26.31■■□□□ 1.8
SREBF1-208ENST00000469356 AIFM3Q96NN9 605 aa26.31■■□□□ 1.8
SREBF1-208ENST00000469356 PCDHA4Q9UN74 947 aa26.31■■□□□ 1.8
SREBF1-208ENST00000469356 MEIS2O14770 477 aa26.3■■□□□ 1.8
SREBF1-208ENST00000469356 HOXA13P31271 388 aaPredicted RBP26.3■■□□□ 1.8
SREBF1-208ENST00000469356 CAP1Q01518 475 aa26.3■■□□□ 1.8
SREBF1-208ENST00000469356 ARHGEF16Q5VV41 709 aa26.3■■□□□ 1.8
SREBF1-208ENST00000469356 MFSD14CQ5VZR4 134 aa26.3■■□□□ 1.8
SREBF1-208ENST00000469356 FBXO46Q6PJ61 603 aaPredicted RBP26.3■■□□□ 1.8
SREBF1-208ENST00000469356 USP17L6PQ6QN14 398 aa26.3■■□□□ 1.8
SREBF1-208ENST00000469356 FCHSD1Q86WN1 690 aa26.3■■□□□ 1.8
SREBF1-208ENST00000469356 MAML3Q96JK9 1138 aa26.3■■□□□ 1.8
SREBF1-208ENST00000469356 RMDN3Q96TC7 470 aa26.3■■□□□ 1.8
SREBF1-208ENST00000469356 CNTN2Q02246 1040 aa26.29■■□□□ 1.8
SREBF1-208ENST00000469356 BLIDQ8IZY5 108 aa26.29■■□□□ 1.8
SREBF1-208ENST00000469356 DAGLBQ8NCG7 672 aa26.29■■□□□ 1.8
SREBF1-208ENST00000469356 NPLOC4Q8TAT6 608 aa26.29■■□□□ 1.8
SREBF1-208ENST00000469356 IWS1Q96ST2 819 aa26.29■■□□□ 1.8
SREBF1-208ENST00000469356 PHF20Q9BVI0 1012 aa26.29■■□□□ 1.8
SREBF1-208ENST00000469356 DAXXQ9UER7 740 aaPredicted RBP26.29■■□□□ 1.8
SREBF1-208ENST00000469356 PDIA4P13667 645 aaKnown RBP26.28■■□□□ 1.8
SREBF1-208ENST00000469356 H3BQV1 296 aa26.27■■□□□ 1.8
SREBF1-208ENST00000469356 GRK4P32298 578 aa26.27■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms