RNA–Protein interactions for RNA: ENST00000468894.1

XRN1-207, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-207ENST00000468894 C7orf72A4D263 438 aa8.28□□□□□ -1.08
XRN1-207ENST00000468894 DLX3O60479 287 aa8.28□□□□□ -1.08
XRN1-207ENST00000468894 TACR1P25103 407 aa8.28□□□□□ -1.08
XRN1-207ENST00000468894 ERVFRD-1P60508 538 aa8.28□□□□□ -1.08
XRN1-207ENST00000468894 CYP4F8P98187 520 aa8.28□□□□□ -1.08
XRN1-207ENST00000468894 MAP4K2Q12851 820 aa8.28□□□□□ -1.08
XRN1-207ENST00000468894 TESK1Q15569 626 aa8.28□□□□□ -1.08
XRN1-207ENST00000468894 INF2Q27J81 1249 aa8.28□□□□□ -1.08
XRN1-207ENST00000468894 ACBD5Q5T8D3 534 aaPredicted RBP8.28□□□□□ -1.08
XRN1-207ENST00000468894 FBLN5Q9UBX5 448 aa8.28□□□□□ -1.08
XRN1-207ENST00000468894 FGFR1P11362 822 aa8.27□□□□□ -1.09
XRN1-207ENST00000468894 PDE6BP35913 854 aa8.27□□□□□ -1.09
XRN1-207ENST00000468894 IFRD2Q12894 506 aaPredicted RBP8.27□□□□□ -1.09
XRN1-207ENST00000468894 BMS1Q14692 1282 aaKnown RBP8.27□□□□□ -1.09
XRN1-207ENST00000468894 E4F1Q66K89 784 aaPredicted RBP8.27□□□□□ -1.09
XRN1-207ENST00000468894 PPIL6Q8IXY8 311 aa8.27□□□□□ -1.09
XRN1-207ENST00000468894 NLGN2Q8NFZ4 835 aa8.27□□□□□ -1.09
XRN1-207ENST00000468894 OSBP2Q969R2 916 aa8.27□□□□□ -1.09
XRN1-207ENST00000468894 EPB41L4BQ9H329 900 aa8.27□□□□□ -1.09
XRN1-207ENST00000468894 KCNK12Q9HB15 430 aa8.27□□□□□ -1.09
XRN1-207ENST00000468894 PDLIM7Q9NR12 457 aa8.27□□□□□ -1.09
XRN1-207ENST00000468894 GULP1Q9UBP9 304 aa8.27□□□□□ -1.09
XRN1-207ENST00000468894 TRAV20A0A0B4J274 112 aa8.26□□□□□ -1.09
XRN1-207ENST00000468894 A0A1W2PQ27 194 aa8.26□□□□□ -1.09
XRN1-207ENST00000468894 A0A1W2PQ64 194 aa8.26□□□□□ -1.09
XRN1-207ENST00000468894 A0A1W2PQC6 194 aa8.26□□□□□ -1.09
XRN1-207ENST00000468894 A0A1W2PQD8 194 aa8.26□□□□□ -1.09
XRN1-207ENST00000468894 MEFVO15553 781 aaPredicted RBP8.26□□□□□ -1.09
XRN1-207ENST00000468894 PRODHO43272 600 aa8.26□□□□□ -1.09
XRN1-207ENST00000468894 PPP1R11O60927 126 aaPredicted RBP8.26□□□□□ -1.09
XRN1-207ENST00000468894 ARL4AP40617 200 aa8.26□□□□□ -1.09
XRN1-207ENST00000468894 KCNAB2Q13303 367 aa8.26□□□□□ -1.09
XRN1-207ENST00000468894 KCTD13Q8WZ19 329 aa8.26□□□□□ -1.09
XRN1-207ENST00000468894 CDK11AQ9UQ88 783 aaPredicted RBP8.26□□□□□ -1.09
XRN1-207ENST00000468894 RWDD3Q9Y3V2 267 aa8.26□□□□□ -1.09
XRN1-207ENST00000468894 OR14I1A6ND48 311 aa8.25□□□□□ -1.09
XRN1-207ENST00000468894 NPHS1O60500 1241 aa8.25□□□□□ -1.09
XRN1-207ENST00000468894 PABPC1P11940 636 aaKnown RBP8.25□□□□□ -1.09
XRN1-207ENST00000468894 MESP2Q0VG99 397 aa8.25□□□□□ -1.09
XRN1-207ENST00000468894 ZNF605Q86T29 641 aa8.25□□□□□ -1.09
XRN1-207ENST00000468894 DPF3Q92784 378 aa8.25□□□□□ -1.09
XRN1-207ENST00000468894 DIO2Q92813 273 aa8.25□□□□□ -1.09
XRN1-207ENST00000468894 DNAJC7Q99615 494 aa8.25□□□□□ -1.09
XRN1-207ENST00000468894 MTA3Q9BTC8 594 aa8.25□□□□□ -1.09
XRN1-207ENST00000468894 DCP1AQ9NPI6 582 aaPredicted RBP8.25□□□□□ -1.09
XRN1-207ENST00000468894 KDM2BQ8NHM5 1336 aa8.25□□□□□ -1.09
XRN1-207ENST00000468894 CCDC144BQ3MJ40 725 aa8.24□□□□□ -1.09
XRN1-207ENST00000468894 FOXB2Q5VYV0 432 aa8.24□□□□□ -1.09
XRN1-207ENST00000468894 NSMFQ6X4W1 530 aa8.24□□□□□ -1.09
XRN1-207ENST00000468894 POU5F2Q8N7G0 328 aa8.24□□□□□ -1.09
XRN1-207ENST00000468894 ZBTB38Q8NAP3 1195 aaPredicted RBP8.24□□□□□ -1.09
XRN1-207ENST00000468894 KRTAP4-8Q9BYQ9 185 aa8.24□□□□□ -1.09
XRN1-207ENST00000468894 ZNF552Q9H707 407 aaPredicted RBP8.24□□□□□ -1.09
XRN1-207ENST00000468894 FBXL7Q9UJT9 491 aa8.24□□□□□ -1.09
XRN1-207ENST00000468894 SRGAP3O43295 1099 aa8.23□□□□□ -1.09
XRN1-207ENST00000468894 DBHP09172 617 aa8.23□□□□□ -1.09
XRN1-207ENST00000468894 FAM153BP0C7A2 387 aa8.23□□□□□ -1.09
XRN1-207ENST00000468894 LCP1P13796 627 aa8.23□□□□□ -1.09
XRN1-207ENST00000468894 LTBRP36941 435 aa8.23□□□□□ -1.09
XRN1-207ENST00000468894 NTRK3Q16288 839 aa8.23□□□□□ -1.09
XRN1-207ENST00000468894 BICRALQ6AI39 1079 aa8.23□□□□□ -1.09
XRN1-207ENST00000468894 IQCEQ6IPM2 695 aa8.23□□□□□ -1.09
XRN1-207ENST00000468894 NLRP10Q86W26 655 aa8.23□□□□□ -1.09
XRN1-207ENST00000468894 LZTR1Q8N653 840 aa8.23□□□□□ -1.09
XRN1-207ENST00000468894 ZSWIM4Q9H7M6 989 aa8.23□□□□□ -1.09
XRN1-207ENST00000468894 KLHL14Q9P2G3 628 aa8.23□□□□□ -1.09
XRN1-207ENST00000468894 NPFFR2Q9Y5X5 522 aa8.23□□□□□ -1.09
XRN1-207ENST00000468894 MYOCOSA0A1B0GUC4 107 aa8.22□□□□□ -1.09
XRN1-207ENST00000468894 NUDT19A8MXV4 375 aa8.22□□□□□ -1.09
XRN1-207ENST00000468894 FARP2O94887 1054 aaPredicted RBP8.22□□□□□ -1.09
XRN1-207ENST00000468894 GLI4P10075 376 aa8.22□□□□□ -1.09
XRN1-207ENST00000468894 YBX1P67809 324 aaKnown RBP8.22□□□□□ -1.09
XRN1-207ENST00000468894 RAB3GAP1Q15042 981 aa8.22□□□□□ -1.09
XRN1-207ENST00000468894 NFE2L2Q16236 605 aa8.22□□□□□ -1.09
XRN1-207ENST00000468894 ZNF648Q5T619 568 aaPredicted RBP8.22□□□□□ -1.09
XRN1-207ENST00000468894 RPTNQ6XPR3 784 aa8.22□□□□□ -1.09
XRN1-207ENST00000468894 JMYQ8N9B5 988 aa8.22□□□□□ -1.09
XRN1-207ENST00000468894 FBXO15Q8NCQ5 510 aaPredicted RBP8.22□□□□□ -1.09
XRN1-207ENST00000468894 RCBTB1Q8NDN9 531 aa8.22□□□□□ -1.09
XRN1-207ENST00000468894 EXOC2Q96KP1 924 aa8.22□□□□□ -1.09
XRN1-207ENST00000468894 PIF1Q9H611 641 aa8.22□□□□□ -1.09
XRN1-207ENST00000468894 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.22□□□□□ -1.09
XRN1-207ENST00000468894 MARCH2Q9P0N8 246 aa8.22□□□□□ -1.09
XRN1-207ENST00000468894 A0A1W2PQJ5 194 aa8.21□□□□□ -1.1
XRN1-207ENST00000468894 BLACEA4D250 179 aa8.21□□□□□ -1.1
XRN1-207ENST00000468894 HRKO00198 91 aa8.21□□□□□ -1.1
XRN1-207ENST00000468894 MPOP05164 745 aa8.21□□□□□ -1.1
XRN1-207ENST00000468894 USP53Q70EK8 1073 aa8.21□□□□□ -1.1
XRN1-207ENST00000468894 DPH6Q7L8W6 267 aa8.21□□□□□ -1.1
XRN1-207ENST00000468894 TEX2Q8IWB9 1127 aa8.21□□□□□ -1.1
XRN1-207ENST00000468894 MCOLN1Q9GZU1 580 aa8.21□□□□□ -1.1
XRN1-207ENST00000468894 PEX10O60683 326 aa8.2□□□□□ -1.1
XRN1-207ENST00000468894 CYBBP04839 570 aa8.2□□□□□ -1.1
XRN1-207ENST00000468894 FPR2P25090 351 aa8.2□□□□□ -1.1
XRN1-207ENST00000468894 VIPR1P32241 457 aa8.2□□□□□ -1.1
XRN1-207ENST00000468894 RPL11P62913 178 aaKnown RBP8.2□□□□□ -1.1
XRN1-207ENST00000468894 CBX2Q14781 532 aaPredicted RBP8.2□□□□□ -1.1
XRN1-207ENST00000468894 PLEKHN1Q494U1 663 aaPredicted RBP8.2□□□□□ -1.1
XRN1-207ENST00000468894 FAM209AQ5JX71 171 aa8.2□□□□□ -1.1
XRN1-207ENST00000468894 Q8N1Y9 231 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms