RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 CDC45O75419 566 aa13.04□□□□□ -0.32
COL4A6-205ENST00000468338 SNAI1O95863 264 aaPredicted RBP13.04□□□□□ -0.32
COL4A6-205ENST00000468338 ZNF865P0CJ78 1059 aaPredicted RBP13.04□□□□□ -0.32
COL4A6-205ENST00000468338 COL6A1P12109 1028 aa13.04□□□□□ -0.32
COL4A6-205ENST00000468338 FOSBP53539 338 aa13.04□□□□□ -0.32
COL4A6-205ENST00000468338 ANTXR2P58335 489 aa13.04□□□□□ -0.32
COL4A6-205ENST00000468338 SNAP25P60880 206 aa13.04□□□□□ -0.32
COL4A6-205ENST00000468338 ASPRV1Q53RT3 343 aa13.04□□□□□ -0.32
COL4A6-205ENST00000468338 PRAMEF19Q5SWL8 479 aa13.04□□□□□ -0.32
COL4A6-205ENST00000468338 IFIT1BQ5T764 474 aaKnown RBP13.04□□□□□ -0.32
COL4A6-205ENST00000468338 CCDC174Q6PII3 467 aa13.04□□□□□ -0.32
COL4A6-205ENST00000468338 PADI6Q6TGC4 694 aa13.04□□□□□ -0.32
COL4A6-205ENST00000468338 NECAB2Q7Z6G3 386 aa13.04□□□□□ -0.32
COL4A6-205ENST00000468338 ANKRD35Q8N283 1001 aa13.04□□□□□ -0.32
COL4A6-205ENST00000468338 IGDCC4Q8TDY8 1250 aa13.04□□□□□ -0.32
COL4A6-205ENST00000468338 DIS3LQ8TF46 1054 aaKnown RBP13.04□□□□□ -0.32
COL4A6-205ENST00000468338 ZDHHC16Q969W1 377 aa13.04□□□□□ -0.32
COL4A6-205ENST00000468338 WDR19Q8NEZ3 1342 aa13.04□□□□□ -0.32
COL4A6-205ENST00000468338 SYNGAP1Q96PV0 1343 aa13.04□□□□□ -0.32
COL4A6-205ENST00000468338 PALM3A6NDB9 673 aaPredicted RBP13.03□□□□□ -0.32
COL4A6-205ENST00000468338 SLC27A2O14975 620 aa13.03□□□□□ -0.32
COL4A6-205ENST00000468338 GOLGA8HP0CJ92 632 aa13.03□□□□□ -0.32
COL4A6-205ENST00000468338 ALAS1P13196 640 aa13.03□□□□□ -0.32
COL4A6-205ENST00000468338 MUM1L1Q5H9M0 696 aa13.03□□□□□ -0.32
COL4A6-205ENST00000468338 CREB3L3Q68CJ9 461 aa13.03□□□□□ -0.32
COL4A6-205ENST00000468338 RALYLQ86SE5 291 aaKnown RBP13.03□□□□□ -0.32
COL4A6-205ENST00000468338 HTATIP2Q9BUP3 242 aa13.03□□□□□ -0.32
COL4A6-205ENST00000468338 ANO2Q9NQ90 1003 aa13.03□□□□□ -0.32
COL4A6-205ENST00000468338 HOMER2Q9NSB8 354 aa13.03□□□□□ -0.32
COL4A6-205ENST00000468338 PPP4R2Q9NY27 417 aa13.03□□□□□ -0.32
COL4A6-205ENST00000468338 CCPG1Q9ULG6 757 aa13.03□□□□□ -0.32
COL4A6-205ENST00000468338 LCTP09848 1927 aa13.03□□□□□ -0.32
COL4A6-205ENST00000468338 ALPK3Q96L96 1907 aa13.03□□□□□ -0.32
COL4A6-205ENST00000468338 SOWAHBA6NEL2 793 aa13.02□□□□□ -0.33
COL4A6-205ENST00000468338 PARP1P09874 1014 aaKnown RBP13.02□□□□□ -0.33
COL4A6-205ENST00000468338 TAL1P17542 331 aaPredicted RBP13.02□□□□□ -0.33
COL4A6-205ENST00000468338 SLC4A3P48751 1232 aa13.02□□□□□ -0.33
COL4A6-205ENST00000468338 CNTN2Q02246 1040 aa13.02□□□□□ -0.33
COL4A6-205ENST00000468338 TROAPQ12815 778 aa13.02□□□□□ -0.33
COL4A6-205ENST00000468338 COL9A3Q14050 684 aaPredicted RBP13.02□□□□□ -0.33
COL4A6-205ENST00000468338 MCM6Q14566 821 aa13.02□□□□□ -0.33
COL4A6-205ENST00000468338 TSGA10IPQ3SY00 556 aa13.02□□□□□ -0.33
COL4A6-205ENST00000468338 CLEC4DQ8WXI8 215 aa13.02□□□□□ -0.33
COL4A6-205ENST00000468338 MTMR8Q96EF0 704 aa13.02□□□□□ -0.33
COL4A6-205ENST00000468338 UBA5Q9GZZ9 404 aa13.02□□□□□ -0.33
COL4A6-205ENST00000468338 MAF1Q9H063 256 aa13.02□□□□□ -0.33
COL4A6-205ENST00000468338 KATNBL1Q9H079 304 aa13.02□□□□□ -0.33
COL4A6-205ENST00000468338 CPVLQ9H3G5 476 aa13.02□□□□□ -0.33
COL4A6-205ENST00000468338 SENP2Q9HC62 589 aa13.02□□□□□ -0.33
COL4A6-205ENST00000468338 POLR3EQ9NVU0 708 aa13.02□□□□□ -0.33
COL4A6-205ENST00000468338 CYP39A1Q9NYL5 469 aa13.02□□□□□ -0.33
COL4A6-205ENST00000468338 RBM27Q9P2N5 1060 aaKnown RBP13.02□□□□□ -0.33
COL4A6-205ENST00000468338 ADGRG1Q9Y653 693 aa13.02□□□□□ -0.33
COL4A6-205ENST00000468338 BAZ2BQ9UIF8 2168 aaKnown RBP13.02□□□□□ -0.33
COL4A6-205ENST00000468338 ASTN1O14525 1302 aa13.02□□□□□ -0.33
COL4A6-205ENST00000468338 PFASO15067 1338 aa13.02□□□□□ -0.33
COL4A6-205ENST00000468338 POTEB2H3BUK9 544 aa13.01□□□□□ -0.33
COL4A6-205ENST00000468338 IFIT3O14879 490 aaKnown RBP13.01□□□□□ -0.33
COL4A6-205ENST00000468338 CENPBP07199 599 aaPredicted RBP13.01□□□□□ -0.33
COL4A6-205ENST00000468338 CNGA1P29973 690 aa13.01□□□□□ -0.33
COL4A6-205ENST00000468338 CHST3Q7LGC8 479 aa13.01□□□□□ -0.33
COL4A6-205ENST00000468338 ADGRF4Q8IZF3 695 aa13.01□□□□□ -0.33
COL4A6-205ENST00000468338 STAG2Q8N3U4 1231 aa13.01□□□□□ -0.33
COL4A6-205ENST00000468338 ZNF454Q8N9F8 522 aa13.01□□□□□ -0.33
COL4A6-205ENST00000468338 RGS22Q8NE09 1264 aa13.01□□□□□ -0.33
COL4A6-205ENST00000468338 ABHD16BQ9H3Z7 469 aa13.01□□□□□ -0.33
COL4A6-205ENST00000468338 C11orf49Q9H6J7 331 aa13.01□□□□□ -0.33
COL4A6-205ENST00000468338 MAD2L2Q9UI95 211 aa13.01□□□□□ -0.33
COL4A6-205ENST00000468338 MYH6P13533 1939 aa13.01□□□□□ -0.33
COL4A6-205ENST00000468338 LOC102724159A0A0B4J2E5 919 aa13□□□□□ -0.33
COL4A6-205ENST00000468338 DNM1LO00429 736 aa13□□□□□ -0.33
COL4A6-205ENST00000468338 NFIBO00712 420 aa13□□□□□ -0.33
COL4A6-205ENST00000468338 MCM5P33992 734 aa13□□□□□ -0.33
COL4A6-205ENST00000468338 GRM4Q14833 912 aa13□□□□□ -0.33
COL4A6-205ENST00000468338 WTAPQ15007 396 aa13□□□□□ -0.33
COL4A6-205ENST00000468338 SART3Q15020 963 aaKnown RBP13□□□□□ -0.33
COL4A6-205ENST00000468338 PWP2Q15269 919 aaKnown RBP13□□□□□ -0.33
COL4A6-205ENST00000468338 SLC35G1Q2M3R5 365 aa13□□□□□ -0.33
COL4A6-205ENST00000468338 CASC1Q6TDU7 716 aa13□□□□□ -0.33
COL4A6-205ENST00000468338 ARMCX2Q7L311 632 aa13□□□□□ -0.33
COL4A6-205ENST00000468338 CCDC144CPQ8IYA2 1237 aa13□□□□□ -0.33
COL4A6-205ENST00000468338 ARRDC4Q8NCT1 418 aa13□□□□□ -0.33
COL4A6-205ENST00000468338 MORC4Q8TE76 937 aa13□□□□□ -0.33
COL4A6-205ENST00000468338 KCNB2Q92953 911 aa13□□□□□ -0.33
COL4A6-205ENST00000468338 MAP3K14Q99558 947 aa13□□□□□ -0.33
COL4A6-205ENST00000468338 JMJD4Q9H9V9 463 aa13□□□□□ -0.33
COL4A6-205ENST00000468338 LY9Q9HBG7 655 aa13□□□□□ -0.33
COL4A6-205ENST00000468338 CDKN2AIPQ9NXV6 580 aaPredicted RBP13□□□□□ -0.33
COL4A6-205ENST00000468338 CNPY2Q9Y2B0 182 aa13□□□□□ -0.33
COL4A6-205ENST00000468338 ERICH2A1L162 156 aa12.99□□□□□ -0.33
COL4A6-205ENST00000468338 ASB14A6NK59 587 aa12.99□□□□□ -0.33
COL4A6-205ENST00000468338 KLRF2D3W0D1 207 aa12.99□□□□□ -0.33
COL4A6-205ENST00000468338 AKR1A1P14550 325 aa12.99□□□□□ -0.33
COL4A6-205ENST00000468338 LIFRP42702 1097 aa12.99□□□□□ -0.33
COL4A6-205ENST00000468338 ACVR2BQ13705 512 aa12.99□□□□□ -0.33
COL4A6-205ENST00000468338 BAATQ14032 418 aaPredicted RBP12.99□□□□□ -0.33
COL4A6-205ENST00000468338 CDC37Q16543 378 aaPredicted RBP12.99□□□□□ -0.33
COL4A6-205ENST00000468338 QRICH1Q2TAL8 776 aa12.99□□□□□ -0.33
COL4A6-205ENST00000468338 TMEM67Q5HYA8 995 aa12.99□□□□□ -0.33
COL4A6-205ENST00000468338 RNF20Q5VTR2 975 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms