RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 C12orf42Q96LP6 360 aa23.36■■□□□ 1.33
TMEM53-207ENST00000468117 SLC37A4O43826 429 aa23.35■■□□□ 1.33
TMEM53-207ENST00000468117 ICAM1P05362 532 aa23.35■■□□□ 1.33
TMEM53-207ENST00000468117 OR52Z1P0C646 297 aa23.35■■□□□ 1.33
TMEM53-207ENST00000468117 SASS6Q6UVJ0 657 aa23.35■■□□□ 1.33
TMEM53-207ENST00000468117 TBC1D5Q92609 795 aa23.35■■□□□ 1.33
TMEM53-207ENST00000468117 CCPG1Q9ULG6 757 aa23.35■■□□□ 1.33
TMEM53-207ENST00000468117 CLEC11AQ9Y240 323 aa23.35■■□□□ 1.33
TMEM53-207ENST00000468117 A0A087X0B3 334 aa23.35■■□□□ 1.33
TMEM53-207ENST00000468117 CFBP00751 764 aa23.35■■□□□ 1.33
TMEM53-207ENST00000468117 PRPHP41219 470 aa23.35■■□□□ 1.33
TMEM53-207ENST00000468117 ORC2Q13416 577 aaPredicted RBP23.35■■□□□ 1.33
TMEM53-207ENST00000468117 TTLL12Q14166 644 aaPredicted RBP23.35■■□□□ 1.33
TMEM53-207ENST00000468117 KRBA2Q6ZNG9 492 aa23.35■■□□□ 1.33
TMEM53-207ENST00000468117 CPXCR1Q8N123 301 aa23.35■■□□□ 1.33
TMEM53-207ENST00000468117 CNNM3Q8NE01 707 aa23.35■■□□□ 1.33
TMEM53-207ENST00000468117 SLC38A10Q9HBR0 1119 aa23.35■■□□□ 1.33
TMEM53-207ENST00000468117 SPDYE3A6NKU9 549 aa23.34■■□□□ 1.33
TMEM53-207ENST00000468117 LONP1P36776 959 aaKnown RBP23.34■■□□□ 1.33
TMEM53-207ENST00000468117 MRPL11Q9Y3B7 192 aaKnown RBP23.34■■□□□ 1.33
TMEM53-207ENST00000468117 ABCB11O95342 1321 aa23.34■■□□□ 1.33
TMEM53-207ENST00000468117 PIK3CDO00329 1044 aa23.33■■□□□ 1.33
TMEM53-207ENST00000468117 CDC25AP30304 524 aa23.33■■□□□ 1.33
TMEM53-207ENST00000468117 PPP4R3AQ6IN85 833 aa23.33■■□□□ 1.33
TMEM53-207ENST00000468117 CLMNQ96JQ2 1002 aa23.33■■□□□ 1.33
TMEM53-207ENST00000468117 ELP3Q9H9T3 547 aa23.33■■□□□ 1.33
TMEM53-207ENST00000468117 TMOD4Q9NZQ9 345 aa23.33■■□□□ 1.33
TMEM53-207ENST00000468117 SERTAD1Q9UHV2 236 aa23.33■■□□□ 1.33
TMEM53-207ENST00000468117 MCTP2Q6DN12 878 aa23.33■■□□□ 1.32
TMEM53-207ENST00000468117 WNK4Q96J92 1243 aa23.33■■□□□ 1.32
TMEM53-207ENST00000468117 RAVER2Q9HCJ3 691 aaKnown RBP23.33■■□□□ 1.32
TMEM53-207ENST00000468117 KIAA1468Q9P260 1216 aa23.33■■□□□ 1.32
TMEM53-207ENST00000468117 A0A087WWV3 80 aa23.32■■□□□ 1.32
TMEM53-207ENST00000468117 FOSP01100 380 aaPredicted RBP23.32■■□□□ 1.32
TMEM53-207ENST00000468117 CALCRLQ16602 461 aa23.32■■□□□ 1.32
TMEM53-207ENST00000468117 FCHSD1Q86WN1 690 aa23.32■■□□□ 1.32
TMEM53-207ENST00000468117 ANKRD13AQ8IZ07 590 aa23.32■■□□□ 1.32
TMEM53-207ENST00000468117 DHX58Q96C10 678 aa23.32■■□□□ 1.32
TMEM53-207ENST00000468117 ATG4CQ96DT6 458 aa23.32■■□□□ 1.32
TMEM53-207ENST00000468117 DDX25Q9UHL0 483 aaKnown RBP23.32■■□□□ 1.32
TMEM53-207ENST00000468117 MAP1SQ66K74 1059 aaPredicted RBP23.32■■□□□ 1.32
TMEM53-207ENST00000468117 RBM46Q8TBY0 533 aaKnown RBP23.32■■□□□ 1.32
TMEM53-207ENST00000468117 CRYGNQ8WXF5 182 aa23.32■■□□□ 1.32
TMEM53-207ENST00000468117 MTMR9Q96QG7 549 aa23.32■■□□□ 1.32
TMEM53-207ENST00000468117 PP2D1A8MPX8 630 aa23.31■■□□□ 1.32
TMEM53-207ENST00000468117 GCOM1H8Y6P7 765 aaPredicted RBP23.31■■□□□ 1.32
TMEM53-207ENST00000468117 VWA5AO00534 786 aa23.31■■□□□ 1.32
TMEM53-207ENST00000468117 FOXN1O15353 648 aa23.31■■□□□ 1.32
TMEM53-207ENST00000468117 ACTN4O43707 911 aaKnown RBP23.31■■□□□ 1.32
TMEM53-207ENST00000468117 POLR2MP0CAP2 368 aa23.31■■□□□ 1.32
TMEM53-207ENST00000468117 USP11P51784 963 aa23.31■■□□□ 1.32
TMEM53-207ENST00000468117 ARHGAP4P98171 946 aa23.31■■□□□ 1.32
TMEM53-207ENST00000468117 PNOCQ13519 176 aa23.31■■□□□ 1.32
TMEM53-207ENST00000468117 ANO6Q4KMQ2 910 aa23.31■■□□□ 1.32
TMEM53-207ENST00000468117 TXKP42681 527 aa23.3■■□□□ 1.32
TMEM53-207ENST00000468117 SH3D19Q5HYK7 790 aa23.3■■□□□ 1.32
TMEM53-207ENST00000468117 OTUD5Q96G74 571 aa23.3■■□□□ 1.32
TMEM53-207ENST00000468117 CTDP1Q9Y5B0 961 aaPredicted RBP23.3■■□□□ 1.32
TMEM53-207ENST00000468117 RBBP6Q7Z6E9 1792 aaKnown RBP23.3■■□□□ 1.32
TMEM53-207ENST00000468117 ZBED4O75132 1171 aa23.3■■□□□ 1.32
TMEM53-207ENST00000468117 ALAS1P13196 640 aa23.3■■□□□ 1.32
TMEM53-207ENST00000468117 GCFC2P16383 781 aaKnown RBP23.3■■□□□ 1.32
TMEM53-207ENST00000468117 SREBF1P36956 1147 aa23.3■■□□□ 1.32
TMEM53-207ENST00000468117 TECP42680 631 aa23.3■■□□□ 1.32
TMEM53-207ENST00000468117 CATSPERGQ6ZRH7 1159 aa23.3■■□□□ 1.32
TMEM53-207ENST00000468117 HOMER2Q9NSB8 354 aa23.3■■□□□ 1.32
TMEM53-207ENST00000468117 IRF6O14896 467 aa23.29■■□□□ 1.32
TMEM53-207ENST00000468117 FMR1Q06787 632 aaKnown RBP eCLIP23.29■■□□□ 1.32
TMEM53-207ENST00000468117 RRAGCQ9HB90 399 aa23.29■■□□□ 1.32
TMEM53-207ENST00000468117 TRAF5O00463 557 aa23.28■■□□□ 1.32
TMEM53-207ENST00000468117 NFIBO00712 420 aa23.28■■□□□ 1.32
TMEM53-207ENST00000468117 COG2Q14746 738 aa23.28■■□□□ 1.32
TMEM53-207ENST00000468117 GRAMD1CQ8IYS0 662 aa23.28■■□□□ 1.32
TMEM53-207ENST00000468117 NAP1L4Q99733 375 aaKnown RBP23.28■■□□□ 1.32
TMEM53-207ENST00000468117 DNAJC25Q9H1X3 360 aa23.28■■□□□ 1.32
TMEM53-207ENST00000468117 SOCS7O14512 581 aa23.28■■□□□ 1.32
TMEM53-207ENST00000468117 DSG3P32926 999 aa23.28■■□□□ 1.32
TMEM53-207ENST00000468117 TXLNAP40222 546 aa23.28■■□□□ 1.32
TMEM53-207ENST00000468117 MDM2Q00987 491 aaPredicted RBP23.28■■□□□ 1.32
TMEM53-207ENST00000468117 PPATQ06203 517 aa23.28■■□□□ 1.32
TMEM53-207ENST00000468117 STX1AQ16623 288 aa23.28■■□□□ 1.32
TMEM53-207ENST00000468117 ERO1BQ86YB8 467 aa23.28■■□□□ 1.32
TMEM53-207ENST00000468117 TEX2Q8IWB9 1127 aa23.28■■□□□ 1.32
TMEM53-207ENST00000468117 CLEC4DQ8WXI8 215 aa23.28■■□□□ 1.32
TMEM53-207ENST00000468117 LOC285556D6RIA3 1793 aa23.27■■□□□ 1.32
TMEM53-207ENST00000468117 CYP3A7-CYP3A51PA0A087WV96 503 aa23.27■■□□□ 1.32
TMEM53-207ENST00000468117 BIN1O00499 593 aa23.27■■□□□ 1.32
TMEM53-207ENST00000468117 FDX1P10109 184 aa23.27■■□□□ 1.32
TMEM53-207ENST00000468117 CYP3A7P24462 503 aa23.27■■□□□ 1.32
TMEM53-207ENST00000468117 UBA7P41226 1012 aa23.27■■□□□ 1.32
TMEM53-207ENST00000468117 KARSQ15046 597 aaKnown RBP23.27■■□□□ 1.32
TMEM53-207ENST00000468117 TREML2Q5T2D2 321 aa23.27■■□□□ 1.32
TMEM53-207ENST00000468117 ARMC9Q7Z3E5 817 aa23.27■■□□□ 1.32
TMEM53-207ENST00000468117 ELOA2Q8IYF1 753 aaPredicted RBP23.27■■□□□ 1.32
TMEM53-207ENST00000468117 HAS1Q92839 578 aa23.27■■□□□ 1.32
TMEM53-207ENST00000468117 GJA10Q969M2 543 aa23.27■■□□□ 1.32
TMEM53-207ENST00000468117 ZNF408Q9H9D4 720 aa23.27■■□□□ 1.32
TMEM53-207ENST00000468117 SPDYE5A6NIY4 337 aa23.26■■□□□ 1.31
TMEM53-207ENST00000468117 SLFN14P0C7P3 912 aa23.26■■□□□ 1.31
TMEM53-207ENST00000468117 POSTNQ15063 836 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms