RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 POLR3EQ9NVU0 708 aa14.22□□□□□ -0.13
VPS26A-204ENST00000467852 Q9Y3F1 56 aa14.22□□□□□ -0.13
VPS26A-204ENST00000467852 CEP250Q9BV73 2442 aa14.22□□□□□ -0.13
VPS26A-204ENST00000467852 SPTBN2O15020 2390 aa14.22□□□□□ -0.13
VPS26A-204ENST00000467852 ANKRD11Q6UB99 2663 aaPredicted RBP14.21□□□□□ -0.13
VPS26A-204ENST00000467852 FANCIQ9NVI1 1328 aa14.21□□□□□ -0.13
VPS26A-204ENST00000467852 FAM208BQ5VWN6 2430 aa14.21□□□□□ -0.13
VPS26A-204ENST00000467852 EXOSC9Q06265 439 aaKnown RBP14.21□□□□□ -0.13
VPS26A-204ENST00000467852 SNRNP48Q6IEG0 339 aaKnown RBP14.21□□□□□ -0.13
VPS26A-204ENST00000467852 ADGRA1Q86SQ6 560 aa14.21□□□□□ -0.13
VPS26A-204ENST00000467852 WWC1Q8IX03 1113 aa14.21□□□□□ -0.13
VPS26A-204ENST00000467852 ANKRD35Q8N283 1001 aa14.21□□□□□ -0.13
VPS26A-204ENST00000467852 KCNG4Q8TDN1 519 aa14.21□□□□□ -0.13
VPS26A-204ENST00000467852 TEX13BQ9BXU2 312 aa14.21□□□□□ -0.13
VPS26A-204ENST00000467852 FBXO28Q9NVF7 368 aa14.21□□□□□ -0.13
VPS26A-204ENST00000467852 PPP1R9AQ9ULJ8 1098 aa14.21□□□□□ -0.13
VPS26A-204ENST00000467852 NOD1Q9Y239 953 aa14.21□□□□□ -0.13
VPS26A-204ENST00000467852 FASNP49327 2511 aaKnown RBP14.2□□□□□ -0.14
VPS26A-204ENST00000467852 PARNO95453 639 aaKnown RBP14.2□□□□□ -0.14
VPS26A-204ENST00000467852 SLC4A3P48751 1232 aa14.2□□□□□ -0.14
VPS26A-204ENST00000467852 DYNLL1P63167 89 aaKnown RBP14.2□□□□□ -0.14
VPS26A-204ENST00000467852 IKBKEQ14164 716 aa14.2□□□□□ -0.14
VPS26A-204ENST00000467852 CCDC155Q8N6L0 562 aa14.2□□□□□ -0.14
VPS26A-204ENST00000467852 GPHNQ9NQX3 736 aaPredicted RBP14.2□□□□□ -0.14
VPS26A-204ENST00000467852 TMX2Q9Y320 296 aa14.2□□□□□ -0.14
VPS26A-204ENST00000467852 NLRC5Q86WI3 1866 aa14.2□□□□□ -0.14
VPS26A-204ENST00000467852 PDGFBP01127 241 aaPredicted RBP14.19□□□□□ -0.14
VPS26A-204ENST00000467852 SMPD1P17405 629 aa14.19□□□□□ -0.14
VPS26A-204ENST00000467852 ARID4AP29374 1257 aaPredicted RBP14.19□□□□□ -0.14
VPS26A-204ENST00000467852 IQSEC1Q6DN90 963 aa14.19□□□□□ -0.14
VPS26A-204ENST00000467852 TMEM179Q6ZVK1 233 aa14.19□□□□□ -0.14
VPS26A-204ENST00000467852 CERS3Q8IU89 383 aa14.19□□□□□ -0.14
VPS26A-204ENST00000467852 REPS2Q8NFH8 660 aa14.19□□□□□ -0.14
VPS26A-204ENST00000467852 DLL3Q9NYJ7 618 aa14.19□□□□□ -0.14
VPS26A-204ENST00000467852 PA2G4Q9UQ80 394 aaKnown RBP14.19□□□□□ -0.14
VPS26A-204ENST00000467852 EYA4O95677 639 aa14.18□□□□□ -0.14
VPS26A-204ENST00000467852 POLR3DP05423 398 aaPredicted RBP14.18□□□□□ -0.14
VPS26A-204ENST00000467852 ICAM3P32942 547 aa14.18□□□□□ -0.14
VPS26A-204ENST00000467852 HYAL1Q12794 435 aa14.18□□□□□ -0.14
VPS26A-204ENST00000467852 TMEM192Q8IY95 271 aa14.18□□□□□ -0.14
VPS26A-204ENST00000467852 CAGE1Q8TC20 777 aa14.18□□□□□ -0.14
VPS26A-204ENST00000467852 AFAP1L1Q8TED9 768 aa14.18□□□□□ -0.14
VPS26A-204ENST00000467852 CHAMP1Q96JM3 812 aa14.18□□□□□ -0.14
VPS26A-204ENST00000467852 FGD4Q96M96 766 aa14.18□□□□□ -0.14
VPS26A-204ENST00000467852 IGFLR1Q9H665 355 aa14.18□□□□□ -0.14
VPS26A-204ENST00000467852 RIPK3Q9Y572 518 aa14.18□□□□□ -0.14
VPS26A-204ENST00000467852 MICAL3Q7RTP6 2002 aa14.18□□□□□ -0.14
VPS26A-204ENST00000467852 USP24Q9UPU5 2620 aa14.17□□□□□ -0.14
VPS26A-204ENST00000467852 ASB14A6NK59 587 aa14.17□□□□□ -0.14
VPS26A-204ENST00000467852 TBX10O75333 385 aa14.17□□□□□ -0.14
VPS26A-204ENST00000467852 MYL3P08590 195 aa14.17□□□□□ -0.14
VPS26A-204ENST00000467852 UQCRFS1P1P0C7P4 283 aa14.17□□□□□ -0.14
VPS26A-204ENST00000467852 PYGBP11216 843 aa14.17□□□□□ -0.14
VPS26A-204ENST00000467852 PLCD1P51178 756 aa14.17□□□□□ -0.14
VPS26A-204ENST00000467852 PTPN21Q16825 1174 aa14.17□□□□□ -0.14
VPS26A-204ENST00000467852 NFRKBQ6P4R8 1299 aa14.17□□□□□ -0.14
VPS26A-204ENST00000467852 ZBTB33Q86T24 672 aa14.17□□□□□ -0.14
VPS26A-204ENST00000467852 TMEM105Q8N8V8 129 aa14.17□□□□□ -0.14
VPS26A-204ENST00000467852 RPGRIP1Q96KN7 1286 aa14.17□□□□□ -0.14
VPS26A-204ENST00000467852 MTG1Q9BT17 334 aaPredicted RBP14.17□□□□□ -0.14
VPS26A-204ENST00000467852 FBXO40Q9UH90 709 aa14.17□□□□□ -0.14
VPS26A-204ENST00000467852 RALYQ9UKM9 306 aaKnown RBP14.17□□□□□ -0.14
VPS26A-204ENST00000467852 CTDP1Q9Y5B0 961 aaPredicted RBP14.17□□□□□ -0.14
VPS26A-204ENST00000467852 MYH8P13535 1937 aa14.16□□□□□ -0.14
VPS26A-204ENST00000467852 IGSF3O75054 1194 aa14.16□□□□□ -0.14
VPS26A-204ENST00000467852 LMNAP02545 664 aaKnown RBP14.16□□□□□ -0.14
VPS26A-204ENST00000467852 PTGS1P23219 599 aa14.16□□□□□ -0.14
VPS26A-204ENST00000467852 NDUFV1P49821 464 aa14.16□□□□□ -0.14
VPS26A-204ENST00000467852 PURAQ00577 322 aaKnown RBP14.16□□□□□ -0.14
VPS26A-204ENST00000467852 ICA1Q05084 483 aa14.16□□□□□ -0.14
VPS26A-204ENST00000467852 PTPN11Q06124 597 aaPredicted RBP14.16□□□□□ -0.14
VPS26A-204ENST00000467852 TFCP2Q12800 502 aa14.16□□□□□ -0.14
VPS26A-204ENST00000467852 PHF7Q9BWX1 381 aaPredicted RBP14.16□□□□□ -0.14
VPS26A-204ENST00000467852 SEMA4AQ9H3S1 761 aa14.16□□□□□ -0.14
VPS26A-204ENST00000467852 COPRSQ9NQ92 184 aa14.16□□□□□ -0.14
VPS26A-204ENST00000467852 MYO5AQ9Y4I1 1855 aaKnown RBP14.16□□□□□ -0.14
VPS26A-204ENST00000467852 SCN10AQ9Y5Y9 1956 aa14.16□□□□□ -0.14
VPS26A-204ENST00000467852 ATG2AQ2TAZ0 1938 aa14.15□□□□□ -0.14
VPS26A-204ENST00000467852 RAD21O60216 631 aa14.15□□□□□ -0.14
VPS26A-204ENST00000467852 CXCL10P02778 98 aa14.15□□□□□ -0.14
VPS26A-204ENST00000467852 AMHP03971 560 aa14.15□□□□□ -0.14
VPS26A-204ENST00000467852 SELPP16109 830 aa14.15□□□□□ -0.14
VPS26A-204ENST00000467852 CYP7A1P22680 504 aa14.15□□□□□ -0.14
VPS26A-204ENST00000467852 CPT1AP50416 773 aa14.15□□□□□ -0.14
VPS26A-204ENST00000467852 HTRA4P83105 476 aaPredicted RBP14.15□□□□□ -0.14
VPS26A-204ENST00000467852 ADAM15Q13444 863 aa14.15□□□□□ -0.14
VPS26A-204ENST00000467852 LRRC8DQ7L1W4 858 aa14.15□□□□□ -0.14
VPS26A-204ENST00000467852 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.15□□□□□ -0.14
VPS26A-204ENST00000467852 FBXO11Q86XK2 927 aa14.15□□□□□ -0.14
VPS26A-204ENST00000467852 SIAH1Q8IUQ4 282 aa14.15□□□□□ -0.14
VPS26A-204ENST00000467852 CPXCR1Q8N123 301 aa14.15□□□□□ -0.14
VPS26A-204ENST00000467852 HINFPQ9BQA5 517 aa14.15□□□□□ -0.14
VPS26A-204ENST00000467852 LMAN2LQ9H0V9 348 aa14.15□□□□□ -0.14
VPS26A-204ENST00000467852 GOPCQ9HD26 462 aa14.15□□□□□ -0.14
VPS26A-204ENST00000467852 RALGAPA2Q2PPJ7 1873 aa14.14□□□□□ -0.15
VPS26A-204ENST00000467852 RRP1P56182 461 aaKnown RBP14.14□□□□□ -0.15
VPS26A-204ENST00000467852 GABPAQ06546 454 aa14.14□□□□□ -0.15
VPS26A-204ENST00000467852 GPNMBQ14956 572 aa14.14□□□□□ -0.15
VPS26A-204ENST00000467852 BRDTQ58F21 947 aaPredicted RBP14.14□□□□□ -0.15
VPS26A-204ENST00000467852 ASTLQ6HA08 431 aaPredicted RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms