RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 ASB14A6NK59 587 aa10.99□□□□□ -0.65
SDCCAG3-208ENST00000466579 ZBTB43O43298 467 aa10.99□□□□□ -0.65
SDCCAG3-208ENST00000466579 SEC24BO95487 1268 aa10.99□□□□□ -0.65
SDCCAG3-208ENST00000466579 EDNRBP24530 442 aa10.99□□□□□ -0.65
SDCCAG3-208ENST00000466579 HSD17B4P51659 736 aa10.99□□□□□ -0.65
SDCCAG3-208ENST00000466579 RPS6P62753 249 aaKnown RBP10.99□□□□□ -0.65
SDCCAG3-208ENST00000466579 USH1GQ495M9 461 aa10.99□□□□□ -0.65
SDCCAG3-208ENST00000466579 NSMFQ6X4W1 530 aa10.99□□□□□ -0.65
SDCCAG3-208ENST00000466579 SYNE3Q6ZMZ3 975 aa10.99□□□□□ -0.65
SDCCAG3-208ENST00000466579 RNF207Q6ZRF8 634 aa10.99□□□□□ -0.65
SDCCAG3-208ENST00000466579 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.99□□□□□ -0.65
SDCCAG3-208ENST00000466579 MAP3K20Q9NYL2 800 aaKnown RBP10.99□□□□□ -0.65
SDCCAG3-208ENST00000466579 DDX20Q9UHI6 824 aaKnown RBP10.99□□□□□ -0.65
SDCCAG3-208ENST00000466579 CYP46A1Q9Y6A2 500 aa10.99□□□□□ -0.65
SDCCAG3-208ENST00000466579 KLF18A0A0U1RQI7 1052 aa10.98□□□□□ -0.65
SDCCAG3-208ENST00000466579 DHX16O60231 1041 aaKnown RBP10.98□□□□□ -0.65
SDCCAG3-208ENST00000466579 RXRAP19793 462 aa10.98□□□□□ -0.65
SDCCAG3-208ENST00000466579 ALDH5A1P51649 535 aaPredicted RBP10.98□□□□□ -0.65
SDCCAG3-208ENST00000466579 TOB2Q14106 344 aaPredicted RBP10.98□□□□□ -0.65
SDCCAG3-208ENST00000466579 RTN1Q16799 776 aa10.98□□□□□ -0.65
SDCCAG3-208ENST00000466579 PRAMEF19Q5SWL8 479 aa10.98□□□□□ -0.65
SDCCAG3-208ENST00000466579 SLC30A10Q6XR72 485 aa10.98□□□□□ -0.65
SDCCAG3-208ENST00000466579 ARMCX2Q7L311 632 aa10.98□□□□□ -0.65
SDCCAG3-208ENST00000466579 MICU3Q86XE3 530 aa10.98□□□□□ -0.65
SDCCAG3-208ENST00000466579 MCF2L2Q86YR7 1114 aa10.98□□□□□ -0.65
SDCCAG3-208ENST00000466579 CCDC144CPQ8IYA2 1237 aa10.98□□□□□ -0.65
SDCCAG3-208ENST00000466579 DNERQ8NFT8 737 aa10.98□□□□□ -0.65
SDCCAG3-208ENST00000466579 SYTL5Q8TDW5 730 aaPredicted RBP10.98□□□□□ -0.65
SDCCAG3-208ENST00000466579 BRF1Q92994 677 aa10.98□□□□□ -0.65
SDCCAG3-208ENST00000466579 RRP36Q96EU6 259 aaKnown RBP10.98□□□□□ -0.65
SDCCAG3-208ENST00000466579 ABHD16BQ9H3Z7 469 aa10.98□□□□□ -0.65
SDCCAG3-208ENST00000466579 ADD3Q9UEY8 706 aaKnown RBP10.98□□□□□ -0.65
SDCCAG3-208ENST00000466579 PCDHA1Q9Y5I3 950 aa10.98□□□□□ -0.65
SDCCAG3-208ENST00000466579 CNTNAP5Q8WYK1 1306 aa10.98□□□□□ -0.65
SDCCAG3-208ENST00000466579 PTPDC1A2A3K4 754 aa10.97□□□□□ -0.65
SDCCAG3-208ENST00000466579 TFRCP02786 760 aaKnown RBP10.97□□□□□ -0.65
SDCCAG3-208ENST00000466579 CDC27P30260 824 aa10.97□□□□□ -0.65
SDCCAG3-208ENST00000466579 NKX3-2P78367 333 aa10.97□□□□□ -0.65
SDCCAG3-208ENST00000466579 MLLT1Q03111 559 aaPredicted RBP10.97□□□□□ -0.65
SDCCAG3-208ENST00000466579 APOBRQ0VD83 1088 aa10.97□□□□□ -0.65
SDCCAG3-208ENST00000466579 ACVR2BQ13705 512 aa10.97□□□□□ -0.65
SDCCAG3-208ENST00000466579 HOMER1Q86YM7 354 aa10.97□□□□□ -0.65
SDCCAG3-208ENST00000466579 TEX2Q8IWB9 1127 aa10.97□□□□□ -0.65
SDCCAG3-208ENST00000466579 TBC1D5Q92609 795 aa10.97□□□□□ -0.65
SDCCAG3-208ENST00000466579 ZNF274Q96GC6 653 aaPredicted RBP10.97□□□□□ -0.65
SDCCAG3-208ENST00000466579 PURBQ96QR8 312 aaKnown RBP10.97□□□□□ -0.65
SDCCAG3-208ENST00000466579 COL20A1Q9P218 1284 aa10.97□□□□□ -0.65
SDCCAG3-208ENST00000466579 CNPY2Q9Y2B0 182 aa10.97□□□□□ -0.65
SDCCAG3-208ENST00000466579 CCDC196A0A1B0GTZ2 297 aa10.96□□□□□ -0.65
SDCCAG3-208ENST00000466579 RBM47A0AV96 593 aaKnown RBP10.96□□□□□ -0.65
SDCCAG3-208ENST00000466579 GOLGA8AA7E2F4 631 aa10.96□□□□□ -0.65
SDCCAG3-208ENST00000466579 GOLGA8BA8MQT2 603 aa10.96□□□□□ -0.65
SDCCAG3-208ENST00000466579 PIK3CDO00329 1044 aa10.96□□□□□ -0.65
SDCCAG3-208ENST00000466579 FARP2O94887 1054 aaPredicted RBP10.96□□□□□ -0.65
SDCCAG3-208ENST00000466579 COL6A1P12109 1028 aa10.96□□□□□ -0.65
SDCCAG3-208ENST00000466579 AKR1A1P14550 325 aa10.96□□□□□ -0.65
SDCCAG3-208ENST00000466579 CALML3P27482 149 aa10.96□□□□□ -0.65
SDCCAG3-208ENST00000466579 PDIA3P30101 505 aaKnown RBP10.96□□□□□ -0.65
SDCCAG3-208ENST00000466579 FGD1P98174 961 aa10.96□□□□□ -0.65
SDCCAG3-208ENST00000466579 NTRK3Q16288 839 aa10.96□□□□□ -0.65
SDCCAG3-208ENST00000466579 RAB11FIP4Q86YS3 637 aa10.96□□□□□ -0.65
SDCCAG3-208ENST00000466579 UPF3BQ9BZI7 483 aaKnown RBP10.96□□□□□ -0.65
SDCCAG3-208ENST00000466579 VTA1Q9NP79 307 aa10.96□□□□□ -0.65
SDCCAG3-208ENST00000466579 FRMPD4Q14CM0 1322 aa10.95□□□□□ -0.66
SDCCAG3-208ENST00000466579 DUSP11O75319 330 aaKnown RBP10.95□□□□□ -0.66
SDCCAG3-208ENST00000466579 CNGA1P29973 690 aa10.95□□□□□ -0.66
SDCCAG3-208ENST00000466579 ADD1P35611 737 aaKnown RBP10.95□□□□□ -0.66
SDCCAG3-208ENST00000466579 METAP2P50579 478 aaKnown RBP eCLIP10.95□□□□□ -0.66
SDCCAG3-208ENST00000466579 TAPT1Q6NXT6 567 aa10.95□□□□□ -0.66
SDCCAG3-208ENST00000466579 CMTR1Q8N1G2 835 aaKnown RBP10.95□□□□□ -0.66
SDCCAG3-208ENST00000466579 NSUN6Q8TEA1 469 aaKnown RBP10.95□□□□□ -0.66
SDCCAG3-208ENST00000466579 IWS1Q96ST2 819 aa10.95□□□□□ -0.66
SDCCAG3-208ENST00000466579 UPF3AQ9H1J1 476 aaKnown RBP10.95□□□□□ -0.66
SDCCAG3-208ENST00000466579 PDRG1Q9NUG6 133 aa10.95□□□□□ -0.66
SDCCAG3-208ENST00000466579 SEC63Q9UGP8 760 aaKnown RBP10.95□□□□□ -0.66
SDCCAG3-208ENST00000466579 FAM184BQ9ULE4 1060 aa10.95□□□□□ -0.66
SDCCAG3-208ENST00000466579 KIAA1217Q5T5P2 1943 aa10.95□□□□□ -0.66
SDCCAG3-208ENST00000466579 ALPK3Q96L96 1907 aa10.94□□□□□ -0.66
SDCCAG3-208ENST00000466579 PDE4DIPQ5VU43 2346 aa10.94□□□□□ -0.66
SDCCAG3-208ENST00000466579 B4DLN1 442 aa10.94□□□□□ -0.66
SDCCAG3-208ENST00000466579 GCOM1H8Y6P7 765 aaPredicted RBP10.94□□□□□ -0.66
SDCCAG3-208ENST00000466579 hCG_1984214I3L0E3 225 aa10.94□□□□□ -0.66
SDCCAG3-208ENST00000466579 DNM1LO00429 736 aa10.94□□□□□ -0.66
SDCCAG3-208ENST00000466579 ADCY6O43306 1168 aa10.94□□□□□ -0.66
SDCCAG3-208ENST00000466579 ADAMTS4O75173 837 aa10.94□□□□□ -0.66
SDCCAG3-208ENST00000466579 POLR2MP0CAP2 368 aa10.94□□□□□ -0.66
SDCCAG3-208ENST00000466579 RARBP10826 455 aa10.94□□□□□ -0.66
SDCCAG3-208ENST00000466579 IFNAR1P17181 557 aa10.94□□□□□ -0.66
SDCCAG3-208ENST00000466579 CST5P28325 142 aaPredicted RBP10.94□□□□□ -0.66
SDCCAG3-208ENST00000466579 RBM25P49756 843 aaKnown RBP10.94□□□□□ -0.66
SDCCAG3-208ENST00000466579 MRPL12P52815 198 aaKnown RBP10.94□□□□□ -0.66
SDCCAG3-208ENST00000466579 CCDC144BQ3MJ40 725 aa10.94□□□□□ -0.66
SDCCAG3-208ENST00000466579 IQSEC1Q6DN90 963 aa10.94□□□□□ -0.66
SDCCAG3-208ENST00000466579 PPP1R18Q6NYC8 613 aa10.94□□□□□ -0.66
SDCCAG3-208ENST00000466579 CHRDL2Q6WN34 429 aa10.94□□□□□ -0.66
SDCCAG3-208ENST00000466579 ZNF713Q8N859 430 aaPredicted RBP10.94□□□□□ -0.66
SDCCAG3-208ENST00000466579 KLHDC9Q8NEP7 349 aa10.94□□□□□ -0.66
SDCCAG3-208ENST00000466579 DIS3LQ8TF46 1054 aaKnown RBP10.94□□□□□ -0.66
SDCCAG3-208ENST00000466579 TAAR1Q96RJ0 339 aa10.94□□□□□ -0.66
SDCCAG3-208ENST00000466579 MPHOSPH6Q99547 160 aaKnown RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms