RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 BRD1O95696 1058 aa12.79□□□□□ -0.36
VCP-204ENST00000466100 CTGFP29279 349 aa12.79□□□□□ -0.36
VCP-204ENST00000466100 GNA11P29992 359 aa12.79□□□□□ -0.36
VCP-204ENST00000466100 NLRP5P59047 1200 aa12.79□□□□□ -0.36
VCP-204ENST00000466100 CAP1Q01518 475 aa12.79□□□□□ -0.36
VCP-204ENST00000466100 MAP2K1Q02750 393 aaPredicted RBP12.79□□□□□ -0.36
VCP-204ENST00000466100 NOM1Q5C9Z4 860 aaKnown RBP12.79□□□□□ -0.36
VCP-204ENST00000466100 USP17L6PQ6QN14 398 aa12.79□□□□□ -0.36
VCP-204ENST00000466100 NCAPG2Q86XI2 1143 aa12.79□□□□□ -0.36
VCP-204ENST00000466100 DIS3L2Q8IYB7 885 aaKnown RBP12.79□□□□□ -0.36
VCP-204ENST00000466100 BLIDQ8IZY5 108 aa12.79□□□□□ -0.36
VCP-204ENST00000466100 SAMD3Q8N6K7 520 aa12.79□□□□□ -0.36
VCP-204ENST00000466100 GLT8D2Q9H1C3 349 aa12.79□□□□□ -0.36
VCP-204ENST00000466100 WBP1LQ9NX94 342 aa12.79□□□□□ -0.36
VCP-204ENST00000466100 CYP39A1Q9NYL5 469 aa12.79□□□□□ -0.36
VCP-204ENST00000466100 COL20A1Q9P218 1284 aa12.79□□□□□ -0.36
VCP-204ENST00000466100 KIAA1217Q5T5P2 1943 aa12.79□□□□□ -0.36
VCP-204ENST00000466100 FRMPD4Q14CM0 1322 aa12.79□□□□□ -0.36
VCP-204ENST00000466100 DNAJC25-GNG10A0A024R161 153 aa12.78□□□□□ -0.36
VCP-204ENST00000466100 VPS37CA5D8V6 355 aaPredicted RBP12.78□□□□□ -0.36
VCP-204ENST00000466100 BTBD18B2RXH4 712 aa12.78□□□□□ -0.36
VCP-204ENST00000466100 H3BQV1 296 aa12.78□□□□□ -0.36
VCP-204ENST00000466100 PDIA4P13667 645 aaKnown RBP12.78□□□□□ -0.36
VCP-204ENST00000466100 U2AF2P26368 475 aaKnown RBP eCLIP12.78□□□□□ -0.36
VCP-204ENST00000466100 MAPK4P31152 587 aa12.78□□□□□ -0.36
VCP-204ENST00000466100 KRT2P35908 639 aa12.78□□□□□ -0.36
VCP-204ENST00000466100 MRPL12P52815 198 aaKnown RBP12.78□□□□□ -0.36
VCP-204ENST00000466100 RPS6P62753 249 aaKnown RBP12.78□□□□□ -0.36
VCP-204ENST00000466100 RESTQ13127 1097 aa12.78□□□□□ -0.36
VCP-204ENST00000466100 NR5A1Q13285 461 aa12.78□□□□□ -0.36
VCP-204ENST00000466100 EARS2Q5JPH6 523 aaKnown RBP12.78□□□□□ -0.36
VCP-204ENST00000466100 IFFO2Q5TF58 517 aa12.78□□□□□ -0.36
VCP-204ENST00000466100 GPR142Q7Z601 462 aa12.78□□□□□ -0.36
VCP-204ENST00000466100 MCF2L2Q86YR7 1114 aa12.78□□□□□ -0.36
VCP-204ENST00000466100 ABRAQ8N0Z2 381 aa12.78□□□□□ -0.36
VCP-204ENST00000466100 REXO1Q8N1G1 1221 aaKnown RBP12.78□□□□□ -0.36
VCP-204ENST00000466100 JMYQ8N9B5 988 aa12.78□□□□□ -0.36
VCP-204ENST00000466100 BICD2Q8TD16 824 aa12.78□□□□□ -0.36
VCP-204ENST00000466100 RASGRP4Q8TDF6 673 aa12.78□□□□□ -0.36
VCP-204ENST00000466100 SYTL5Q8TDW5 730 aaPredicted RBP12.78□□□□□ -0.36
VCP-204ENST00000466100 FOXP1Q9H334 677 aaPredicted RBP12.78□□□□□ -0.36
VCP-204ENST00000466100 TMEM260Q9NX78 707 aa12.78□□□□□ -0.36
VCP-204ENST00000466100 MAP3K20Q9NYL2 800 aaKnown RBP12.78□□□□□ -0.36
VCP-204ENST00000466100 CIZ1Q9ULV3 898 aaPredicted RBP12.78□□□□□ -0.36
VCP-204ENST00000466100 PCDHA6Q9UN73 950 aa12.78□□□□□ -0.36
VCP-204ENST00000466100 PCDHA8Q9Y5H6 950 aa12.78□□□□□ -0.36
VCP-204ENST00000466100 PFASO15067 1338 aa12.78□□□□□ -0.36
VCP-204ENST00000466100 FAM205CA6NFA0 338 aa12.77□□□□□ -0.37
VCP-204ENST00000466100 GCOM1H8Y6P7 765 aaPredicted RBP12.77□□□□□ -0.37
VCP-204ENST00000466100 CFBP00751 764 aa12.77□□□□□ -0.37
VCP-204ENST00000466100 POLR2MP0CAP2 368 aa12.77□□□□□ -0.37
VCP-204ENST00000466100 PTPREP23469 700 aa12.77□□□□□ -0.37
VCP-204ENST00000466100 HOXA13P31271 388 aaPredicted RBP12.77□□□□□ -0.37
VCP-204ENST00000466100 LACTBP83111 547 aaPredicted RBP12.77□□□□□ -0.37
VCP-204ENST00000466100 AP3B2Q13367 1082 aa12.77□□□□□ -0.37
VCP-204ENST00000466100 BAATQ14032 418 aaPredicted RBP12.77□□□□□ -0.37
VCP-204ENST00000466100 GRB14Q14449 540 aa12.77□□□□□ -0.37
VCP-204ENST00000466100 NSMFQ6X4W1 530 aa12.77□□□□□ -0.37
VCP-204ENST00000466100 RNF207Q6ZRF8 634 aa12.77□□□□□ -0.37
VCP-204ENST00000466100 PLEKHH3Q7Z736 793 aa12.77□□□□□ -0.37
VCP-204ENST00000466100 CRYGNQ8WXF5 182 aa12.77□□□□□ -0.37
VCP-204ENST00000466100 FGD4Q96M96 766 aa12.77□□□□□ -0.37
VCP-204ENST00000466100 BIN2Q9UBW5 565 aaPredicted RBP12.77□□□□□ -0.37
VCP-204ENST00000466100 ASTN1O14525 1302 aa12.77□□□□□ -0.37
VCP-204ENST00000466100 RPTORQ8N122 1335 aa12.77□□□□□ -0.37
VCP-204ENST00000466100 GPR25O00155 361 aa12.76□□□□□ -0.37
VCP-204ENST00000466100 STRNO43815 780 aa12.76□□□□□ -0.37
VCP-204ENST00000466100 EDIL3O43854 480 aa12.76□□□□□ -0.37
VCP-204ENST00000466100 ZSCAN22P10073 491 aaPredicted RBP12.76□□□□□ -0.37
VCP-204ENST00000466100 FCER1AP12319 257 aa12.76□□□□□ -0.37
VCP-204ENST00000466100 SP3Q02447 781 aa12.76□□□□□ -0.37
VCP-204ENST00000466100 SAFBQ15424 915 aaKnown RBP eCLIP12.76□□□□□ -0.37
VCP-204ENST00000466100 MORN1Q5T089 497 aa12.76□□□□□ -0.37
VCP-204ENST00000466100 JAKMIP3Q5VZ66 844 aa12.76□□□□□ -0.37
VCP-204ENST00000466100 NOSTRINQ8IVI9 506 aa12.76□□□□□ -0.37
VCP-204ENST00000466100 FAM133AQ8N9E0 248 aa12.76□□□□□ -0.37
VCP-204ENST00000466100 USP6NLQ92738 828 aa12.76□□□□□ -0.37
VCP-204ENST00000466100 PURBQ96QR8 312 aaKnown RBP12.76□□□□□ -0.37
VCP-204ENST00000466100 MMP19Q99542 508 aa12.76□□□□□ -0.37
VCP-204ENST00000466100 ARHGAP39Q9C0H5 1083 aa12.76□□□□□ -0.37
VCP-204ENST00000466100 BRMS1Q9HCU9 246 aa12.76□□□□□ -0.37
VCP-204ENST00000466100 SLC15A5A6NIM6 579 aa12.75□□□□□ -0.37
VCP-204ENST00000466100 F13A1P00488 732 aa12.75□□□□□ -0.37
VCP-204ENST00000466100 FOSP01100 380 aaPredicted RBP12.75□□□□□ -0.37
VCP-204ENST00000466100 ADORA2AP29274 412 aa12.75□□□□□ -0.37
VCP-204ENST00000466100 CNTN2Q02246 1040 aa12.75□□□□□ -0.37
VCP-204ENST00000466100 WDR78Q5VTH9 848 aa12.75□□□□□ -0.37
VCP-204ENST00000466100 MCTP2Q6DN12 878 aa12.75□□□□□ -0.37
VCP-204ENST00000466100 KRT25Q7Z3Z0 450 aa12.75□□□□□ -0.37
VCP-204ENST00000466100 FERMT3Q86UX7 667 aa12.75□□□□□ -0.37
VCP-204ENST00000466100 ANKRD35Q8N283 1001 aa12.75□□□□□ -0.37
VCP-204ENST00000466100 PGBD1Q96JS3 809 aa12.75□□□□□ -0.37
VCP-204ENST00000466100 TRIM47Q96LD4 638 aa12.75□□□□□ -0.37
VCP-204ENST00000466100 TAAR1Q96RJ0 339 aa12.75□□□□□ -0.37
VCP-204ENST00000466100 ANO3Q9BYT9 981 aa12.75□□□□□ -0.37
VCP-204ENST00000466100 BRCA2P51587 3418 aa12.74□□□□□ -0.37
VCP-204ENST00000466100 SOWAHBA6NEL2 793 aa12.74□□□□□ -0.37
VCP-204ENST00000466100 COBLO75128 1261 aa12.74□□□□□ -0.37
VCP-204ENST00000466100 PGK2P07205 417 aa12.74□□□□□ -0.37
VCP-204ENST00000466100 SREBF1P36956 1147 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms