RNA–Protein interactions for RNA: ENST00000465966.4

DDR1-242, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best)

Gene DDR1, Length 268 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-242ENST00000465966 ALDH8A1Q9H2A2 487 aaPredicted RBP10.12□□□□□ -0.79
DDR1-242ENST00000465966 A1CFQ9NQ94 594 aaKnown RBP10.12□□□□□ -0.79
DDR1-242ENST00000465966 GPHNQ9NQX3 736 aaPredicted RBP10.12□□□□□ -0.79
DDR1-242ENST00000465966 DIAPH3Q9NSV4 1193 aa10.12□□□□□ -0.79
DDR1-242ENST00000465966 RNF146Q9NTX7 359 aa10.12□□□□□ -0.79
DDR1-242ENST00000465966 POLR3EQ9NVU0 708 aa10.12□□□□□ -0.79
DDR1-242ENST00000465966 MTMR4Q9NYA4 1195 aa10.12□□□□□ -0.79
DDR1-242ENST00000465966 GRIN2DO15399 1336 aa10.11□□□□□ -0.79
DDR1-242ENST00000465966 RAD50Q92878 1312 aa10.11□□□□□ -0.79
DDR1-242ENST00000465966 IGKV6D-41A0A0C4DH26 115 aa10.11□□□□□ -0.79
DDR1-242ENST00000465966 A0A0D9SFI3 127 aa10.11□□□□□ -0.79
DDR1-242ENST00000465966 SOWAHBA6NEL2 793 aa10.11□□□□□ -0.79
DDR1-242ENST00000465966 GSG1L2A8MUP6 293 aa10.11□□□□□ -0.79
DDR1-242ENST00000465966 SGSM2O43147 1006 aa10.11□□□□□ -0.79
DDR1-242ENST00000465966 CHGBP05060 677 aa10.11□□□□□ -0.79
DDR1-242ENST00000465966 SLC3A2P08195 630 aaKnown RBP10.11□□□□□ -0.79
DDR1-242ENST00000465966 TSPY3P0CV98 308 aa10.11□□□□□ -0.79
DDR1-242ENST00000465966 TSPY8P0CW00 308 aa10.11□□□□□ -0.79
DDR1-242ENST00000465966 ALAS1P13196 640 aa10.11□□□□□ -0.79
DDR1-242ENST00000465966 RFC2P35250 354 aa10.11□□□□□ -0.79
DDR1-242ENST00000465966 SLC1A4P43007 532 aa10.11□□□□□ -0.79
DDR1-242ENST00000465966 TDO2P48775 406 aa10.11□□□□□ -0.79
DDR1-242ENST00000465966 RBM25P49756 843 aaKnown RBP10.11□□□□□ -0.79
DDR1-242ENST00000465966 TTLL4Q14679 1199 aa10.11□□□□□ -0.79
DDR1-242ENST00000465966 BRDTQ58F21 947 aaPredicted RBP10.11□□□□□ -0.79
DDR1-242ENST00000465966 KIAA1211Q6ZU35 1233 aa10.11□□□□□ -0.79
DDR1-242ENST00000465966 EEPD1Q7L9B9 569 aa10.11□□□□□ -0.79
DDR1-242ENST00000465966 LRRC47Q8N1G4 583 aaKnown RBP10.11□□□□□ -0.79
DDR1-242ENST00000465966 KBTBD3Q8NAB2 608 aa10.11□□□□□ -0.79
DDR1-242ENST00000465966 STAG1Q8WVM7 1258 aa10.11□□□□□ -0.79
DDR1-242ENST00000465966 FAM227BQ96M60 508 aa10.11□□□□□ -0.79
DDR1-242ENST00000465966 AGBL1Q96MI9 1066 aa10.11□□□□□ -0.79
DDR1-242ENST00000465966 EPHX3Q9H6B9 360 aa10.11□□□□□ -0.79
DDR1-242ENST00000465966 CERS4Q9HA82 394 aa10.11□□□□□ -0.79
DDR1-242ENST00000465966 VTA1Q9NP79 307 aa10.11□□□□□ -0.79
DDR1-242ENST00000465966 TNKSO95271 1327 aa10.1□□□□□ -0.79
DDR1-242ENST00000465966 RFXAPO00287 272 aa10.1□□□□□ -0.79
DDR1-242ENST00000465966 TLL1O43897 1013 aa10.1□□□□□ -0.79
DDR1-242ENST00000465966 PRDM1O75626 825 aa10.1□□□□□ -0.79
DDR1-242ENST00000465966 REC8O95072 547 aa10.1□□□□□ -0.79
DDR1-242ENST00000465966 CYP2C9P11712 490 aa10.1□□□□□ -0.79
DDR1-242ENST00000465966 CPT1AP50416 773 aa10.1□□□□□ -0.79
DDR1-242ENST00000465966 PDE4BQ07343 736 aa10.1□□□□□ -0.79
DDR1-242ENST00000465966 TAPT1Q6NXT6 567 aa10.1□□□□□ -0.79
DDR1-242ENST00000465966 CWC27Q6UX04 472 aaKnown RBP10.1□□□□□ -0.79
DDR1-242ENST00000465966 FBXO16Q8IX29 292 aaPredicted RBP10.1□□□□□ -0.79
DDR1-242ENST00000465966 ARNTL2Q8WYA1 636 aa10.1□□□□□ -0.79
DDR1-242ENST00000465966 GMCL1Q96IK5 515 aa10.1□□□□□ -0.79
DDR1-242ENST00000465966 USP26Q9BXU7 913 aa10.1□□□□□ -0.79
DDR1-242ENST00000465966 NACAP1Q9BZK3 213 aa10.1□□□□□ -0.79
DDR1-242ENST00000465966 FTOQ9C0B1 505 aaKnown RBP eCLIP10.1□□□□□ -0.79
DDR1-242ENST00000465966 PDGFCQ9NRA1 345 aa10.1□□□□□ -0.79
DDR1-242ENST00000465966 TRMT13Q9NUP7 481 aaKnown RBP10.1□□□□□ -0.79
DDR1-242ENST00000465966 MUC3AQ02505 3323 aa10.1□□□□□ -0.79
DDR1-242ENST00000465966 SMCHD1A6NHR9 2005 aa10.09□□□□□ -0.79
DDR1-242ENST00000465966 HIP1O00291 1037 aa10.09□□□□□ -0.79
DDR1-242ENST00000465966 PLA2G6O60733 806 aa10.09□□□□□ -0.79
DDR1-242ENST00000465966 EIF5BO60841 1220 aaKnown RBP10.09□□□□□ -0.79
DDR1-242ENST00000465966 GPR37L1O60883 481 aa10.09□□□□□ -0.79
DDR1-242ENST00000465966 MYL3P08590 195 aa10.09□□□□□ -0.79
DDR1-242ENST00000465966 LRRFIP1Q32MZ4 808 aaKnown RBP10.09□□□□□ -0.79
DDR1-242ENST00000465966 DUSP28Q4G0W2 176 aa10.09□□□□□ -0.79
DDR1-242ENST00000465966 FAM47CQ5HY64 1035 aa10.09□□□□□ -0.79
DDR1-242ENST00000465966 NSMFQ6X4W1 530 aa10.09□□□□□ -0.79
DDR1-242ENST00000465966 HERC6Q8IVU3 1022 aa10.09□□□□□ -0.79
DDR1-242ENST00000465966 NEDD1Q8NHV4 660 aa10.09□□□□□ -0.79
DDR1-242ENST00000465966 APPBP2Q92624 585 aa10.09□□□□□ -0.79
DDR1-242ENST00000465966 MPHOSPH6Q99547 160 aaKnown RBP10.09□□□□□ -0.79
DDR1-242ENST00000465966 KIF2CQ99661 725 aa10.09□□□□□ -0.79
DDR1-242ENST00000465966 MTG1Q9BT17 334 aaPredicted RBP10.09□□□□□ -0.79
DDR1-242ENST00000465966 WDR11Q9BZH6 1224 aa10.09□□□□□ -0.79
DDR1-242ENST00000465966 LSG1Q9H089 658 aaKnown RBP10.09□□□□□ -0.79
DDR1-242ENST00000465966 ANO2Q9NQ90 1003 aa10.09□□□□□ -0.79
DDR1-242ENST00000465966 CYP39A1Q9NYL5 469 aa10.09□□□□□ -0.79
DDR1-242ENST00000465966 ADD3Q9UEY8 706 aaKnown RBP10.09□□□□□ -0.79
DDR1-242ENST00000465966 NOD1Q9Y239 953 aa10.09□□□□□ -0.79
DDR1-242ENST00000465966 ZNF536O15090 1300 aa10.08□□□□□ -0.8
DDR1-242ENST00000465966 LOC102724159A0A0B4J2E5 919 aa10.08□□□□□ -0.8
DDR1-242ENST00000465966 PATL2C9JE40 543 aaKnown RBP10.08□□□□□ -0.8
DDR1-242ENST00000465966 PITPNM1O00562 1244 aa10.08□□□□□ -0.8
DDR1-242ENST00000465966 KPNA6O60684 536 aa10.08□□□□□ -0.8
DDR1-242ENST00000465966 BAIAP3O94812 1187 aa10.08□□□□□ -0.8
DDR1-242ENST00000465966 ZFYP08048 801 aaPredicted RBP10.08□□□□□ -0.8
DDR1-242ENST00000465966 IQCF3P0C7M6 154 aa10.08□□□□□ -0.8
DDR1-242ENST00000465966 MCCP23508 829 aa10.08□□□□□ -0.8
DDR1-242ENST00000465966 KCNJ6P48051 423 aa10.08□□□□□ -0.8
DDR1-242ENST00000465966 PURAQ00577 322 aaKnown RBP10.08□□□□□ -0.8
DDR1-242ENST00000465966 TFAP4Q01664 338 aa10.08□□□□□ -0.8
DDR1-242ENST00000465966 TAP1Q03518 808 aa10.08□□□□□ -0.8
DDR1-242ENST00000465966 BFSP2Q13515 415 aa10.08□□□□□ -0.8
DDR1-242ENST00000465966 PWP2Q15269 919 aaKnown RBP10.08□□□□□ -0.8
DDR1-242ENST00000465966 NFRKBQ6P4R8 1299 aa10.08□□□□□ -0.8
DDR1-242ENST00000465966 ZNF589Q86UQ0 364 aaPredicted RBP10.08□□□□□ -0.8
DDR1-242ENST00000465966 MORC4Q8TE76 937 aa10.08□□□□□ -0.8
DDR1-242ENST00000465966 RUFY2Q8WXA3 655 aa10.08□□□□□ -0.8
DDR1-242ENST00000465966 VWCEQ96DN2 955 aa10.08□□□□□ -0.8
DDR1-242ENST00000465966 CCPG1Q9ULG6 757 aa10.08□□□□□ -0.8
DDR1-242ENST00000465966 CCDC171Q6TFL3 1326 aa10.07□□□□□ -0.8
DDR1-242ENST00000465966 EPOPA6NHQ4 379 aa10.07□□□□□ -0.8
DDR1-242ENST00000465966 NKRFO15226 690 aaKnown RBP eCLIP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms