RNA–Protein interactions for RNA: ENST00000464576.1

PTPN18-209, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 5

Gene PTPN18, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-209ENST00000464576 CHD9Q3L8U1 2897 aa11.1□□□□□ -0.63
PTPN18-209ENST00000464576 BDP1A6H8Y1 2624 aa11.09□□□□□ -0.63
PTPN18-209ENST00000464576 LOC102724159A0A0B4J2E5 919 aa11.09□□□□□ -0.63
PTPN18-209ENST00000464576 CTAGE5O15320 804 aa11.09□□□□□ -0.63
PTPN18-209ENST00000464576 CD4P01730 458 aa11.09□□□□□ -0.63
PTPN18-209ENST00000464576 PBX2P40425 430 aa11.09□□□□□ -0.63
PTPN18-209ENST00000464576 ALDH5A1P51649 535 aaPredicted RBP11.09□□□□□ -0.63
PTPN18-209ENST00000464576 RRP1P56182 461 aaKnown RBP11.09□□□□□ -0.63
PTPN18-209ENST00000464576 CHMP4BP1P59074 171 aa11.09□□□□□ -0.63
PTPN18-209ENST00000464576 HAND2P61296 217 aa11.09□□□□□ -0.63
PTPN18-209ENST00000464576 PSMC6P62333 389 aa11.09□□□□□ -0.63
PTPN18-209ENST00000464576 NKX3-2P78367 333 aa11.09□□□□□ -0.63
PTPN18-209ENST00000464576 PPP2R5BQ15173 497 aa11.09□□□□□ -0.63
PTPN18-209ENST00000464576 PWP2Q15269 919 aaKnown RBP11.09□□□□□ -0.63
PTPN18-209ENST00000464576 DUSP28Q4G0W2 176 aa11.09□□□□□ -0.63
PTPN18-209ENST00000464576 TTBK2Q6IQ55 1244 aa11.09□□□□□ -0.63
PTPN18-209ENST00000464576 TAPT1Q6NXT6 567 aa11.09□□□□□ -0.63
PTPN18-209ENST00000464576 C16orf59Q7L2K0 433 aa11.09□□□□□ -0.63
PTPN18-209ENST00000464576 OR6J1Q8NGC5 347 aa11.09□□□□□ -0.63
PTPN18-209ENST00000464576 HERVK_113Q902F9 699 aa11.09□□□□□ -0.63
PTPN18-209ENST00000464576 ESR2Q92731 530 aa11.09□□□□□ -0.63
PTPN18-209ENST00000464576 TTC14Q96N46 770 aa11.09□□□□□ -0.63
PTPN18-209ENST00000464576 PRDM12Q9H4Q4 367 aa11.09□□□□□ -0.63
PTPN18-209ENST00000464576 NOD1Q9Y239 953 aa11.09□□□□□ -0.63
PTPN18-209ENST00000464576 ASTN1O14525 1302 aa11.09□□□□□ -0.63
PTPN18-209ENST00000464576 NFIBO00712 420 aa11.08□□□□□ -0.64
PTPN18-209ENST00000464576 NKRFO15226 690 aaKnown RBP eCLIP11.08□□□□□ -0.64
PTPN18-209ENST00000464576 DHX16O60231 1041 aaKnown RBP11.08□□□□□ -0.64
PTPN18-209ENST00000464576 B4GALT4O60513 344 aa11.08□□□□□ -0.64
PTPN18-209ENST00000464576 KPNA6O60684 536 aa11.08□□□□□ -0.64
PTPN18-209ENST00000464576 HSPD1P10809 573 aaKnown RBP11.08□□□□□ -0.64
PTPN18-209ENST00000464576 PCP11498 1178 aaKnown RBP11.08□□□□□ -0.64
PTPN18-209ENST00000464576 ACTN1P12814 892 aa11.08□□□□□ -0.64
PTPN18-209ENST00000464576 CCDC178Q5BJE1 867 aa11.08□□□□□ -0.64
PTPN18-209ENST00000464576 TJAP1Q5JTD0 557 aa11.08□□□□□ -0.64
PTPN18-209ENST00000464576 AKNAD1Q5T1N1 836 aa11.08□□□□□ -0.64
PTPN18-209ENST00000464576 BTNL9Q6UXG8 535 aa11.08□□□□□ -0.64
PTPN18-209ENST00000464576 RASGRP2Q7LDG7 609 aa11.08□□□□□ -0.64
PTPN18-209ENST00000464576 IQCA1Q86XH1 822 aa11.08□□□□□ -0.64
PTPN18-209ENST00000464576 SLC43A3Q8NBI5 491 aa11.08□□□□□ -0.64
PTPN18-209ENST00000464576 RETREG2Q8NC44 543 aa11.08□□□□□ -0.64
PTPN18-209ENST00000464576 FAM227BQ96M60 508 aa11.08□□□□□ -0.64
PTPN18-209ENST00000464576 PURBQ96QR8 312 aaKnown RBP11.08□□□□□ -0.64
PTPN18-209ENST00000464576 CRBNQ96SW2 442 aa11.08□□□□□ -0.64
PTPN18-209ENST00000464576 MTG1Q9BT17 334 aaPredicted RBP11.08□□□□□ -0.64
PTPN18-209ENST00000464576 TCP11L1Q9NUJ3 509 aa11.08□□□□□ -0.64
PTPN18-209ENST00000464576 DDX49Q9Y6V7 483 aaKnown RBP11.08□□□□□ -0.64
PTPN18-209ENST00000464576 CCDC171Q6TFL3 1326 aa11.08□□□□□ -0.64
PTPN18-209ENST00000464576 MYH6P13533 1939 aa11.07□□□□□ -0.64
PTPN18-209ENST00000464576 GBF1Q92538 1859 aa11.07□□□□□ -0.64
PTPN18-209ENST00000464576 A0A0D9SFI3 127 aa11.07□□□□□ -0.64
PTPN18-209ENST00000464576 ZNF213O14771 459 aa11.07□□□□□ -0.64
PTPN18-209ENST00000464576 FGRP09769 529 aa11.07□□□□□ -0.64
PTPN18-209ENST00000464576 PDHBP11177 359 aa11.07□□□□□ -0.64
PTPN18-209ENST00000464576 NMIQ13287 307 aaPredicted RBP11.07□□□□□ -0.64
PTPN18-209ENST00000464576 CCDC85BQ15834 202 aaPredicted RBP11.07□□□□□ -0.64
PTPN18-209ENST00000464576 USH1GQ495M9 461 aa11.07□□□□□ -0.64
PTPN18-209ENST00000464576 GPATCH4Q5T3I0 446 aaKnown RBP11.07□□□□□ -0.64
PTPN18-209ENST00000464576 RASIP1Q5U651 963 aa11.07□□□□□ -0.64
PTPN18-209ENST00000464576 PPP2R2DQ66LE6 453 aa11.07□□□□□ -0.64
PTPN18-209ENST00000464576 B4GALNT3Q6L9W6 998 aa11.07□□□□□ -0.64
PTPN18-209ENST00000464576 MORC4Q8TE76 937 aa11.07□□□□□ -0.64
PTPN18-209ENST00000464576 SCFD2Q8WU76 684 aa11.07□□□□□ -0.64
PTPN18-209ENST00000464576 NOC4LQ9BVI4 516 aaKnown RBP11.07□□□□□ -0.64
PTPN18-209ENST00000464576 FTOQ9C0B1 505 aaKnown RBP eCLIP11.07□□□□□ -0.64
PTPN18-209ENST00000464576 LNPKQ9C0E8 428 aa11.07□□□□□ -0.64
PTPN18-209ENST00000464576 ALDH8A1Q9H2A2 487 aaPredicted RBP11.07□□□□□ -0.64
PTPN18-209ENST00000464576 NKX2-4Q9H2Z4 354 aa11.07□□□□□ -0.64
PTPN18-209ENST00000464576 RWDD1Q9H446 243 aaPredicted RBP11.07□□□□□ -0.64
PTPN18-209ENST00000464576 KAT14Q9H8E8 782 aa11.07□□□□□ -0.64
PTPN18-209ENST00000464576 DIAPH3Q9NSV4 1193 aa11.07□□□□□ -0.64
PTPN18-209ENST00000464576 NCOR1O75376 2440 aa11.07□□□□□ -0.64
PTPN18-209ENST00000464576 TRANK1O15050 2925 aa11.07□□□□□ -0.64
PTPN18-209ENST00000464576 TNKSO95271 1327 aa11.07□□□□□ -0.64
PTPN18-209ENST00000464576 LRRC37A2A6NM11 1700 aa11.06□□□□□ -0.64
PTPN18-209ENST00000464576 FOXP2O15409 715 aa11.06□□□□□ -0.64
PTPN18-209ENST00000464576 PFKMP08237 780 aa11.06□□□□□ -0.64
PTPN18-209ENST00000464576 TXNP10599 105 aaKnown RBP11.06□□□□□ -0.64
PTPN18-209ENST00000464576 ATP2A2P16615 1042 aaKnown RBP11.06□□□□□ -0.64
PTPN18-209ENST00000464576 PTGS1P23219 599 aa11.06□□□□□ -0.64
PTPN18-209ENST00000464576 RPS6P62753 249 aaKnown RBP11.06□□□□□ -0.64
PTPN18-209ENST00000464576 ZNF543Q08ER8 600 aa11.06□□□□□ -0.64
PTPN18-209ENST00000464576 HDAC1Q13547 482 aaPredicted RBP11.06□□□□□ -0.64
PTPN18-209ENST00000464576 TTLL4Q14679 1199 aa11.06□□□□□ -0.64
PTPN18-209ENST00000464576 SLC30A10Q6XR72 485 aa11.06□□□□□ -0.64
PTPN18-209ENST00000464576 DEFB128Q7Z7B8 93 aa11.06□□□□□ -0.64
PTPN18-209ENST00000464576 DNERQ8NFT8 737 aa11.06□□□□□ -0.64
PTPN18-209ENST00000464576 SCLYQ96I15 445 aa11.06□□□□□ -0.64
PTPN18-209ENST00000464576 TRMT13Q9NUP7 481 aaKnown RBP11.06□□□□□ -0.64
PTPN18-209ENST00000464576 CXXC1Q9P0U4 656 aaPredicted RBP11.06□□□□□ -0.64
PTPN18-209ENST00000464576 GRIN2DO15399 1336 aa11.06□□□□□ -0.64
PTPN18-209ENST00000464576 ZMYM6O95789 1325 aa11.06□□□□□ -0.64
PTPN18-209ENST00000464576 UMODL1Q5DID0 1318 aa11.06□□□□□ -0.64
PTPN18-209ENST00000464576 LCTP09848 1927 aa11.05□□□□□ -0.64
PTPN18-209ENST00000464576 KIF28PB7ZC32 967 aa11.05□□□□□ -0.64
PTPN18-209ENST00000464576 HIP1O00291 1037 aa11.05□□□□□ -0.64
PTPN18-209ENST00000464576 GOLGA8HP0CJ92 632 aa11.05□□□□□ -0.64
PTPN18-209ENST00000464576 CYP2C9P11712 490 aa11.05□□□□□ -0.64
PTPN18-209ENST00000464576 RFC2P35250 354 aa11.05□□□□□ -0.64
PTPN18-209ENST00000464576 NOVP48745 357 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms