RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 RAG1P15918 1043 aa24.03■■□□□ 1.44
PDLIM4-205ENST00000463615 FSCN1Q16658 493 aaKnown RBP24.03■■□□□ 1.44
PDLIM4-205ENST00000463615 DEFB123Q8N688 67 aa24.03■■□□□ 1.44
PDLIM4-205ENST00000463615 UBAC1Q9BSL1 405 aa24.03■■□□□ 1.44
PDLIM4-205ENST00000463615 UBA5Q9GZZ9 404 aa24.03■■□□□ 1.44
PDLIM4-205ENST00000463615 AP5M1Q9H0R1 490 aa24.03■■□□□ 1.44
PDLIM4-205ENST00000463615 IRX6P78412 446 aaPredicted RBP24.02■■□□□ 1.44
PDLIM4-205ENST00000463615 BEX3Q00994 111 aa24.02■■□□□ 1.44
PDLIM4-205ENST00000463615 CDC37Q16543 378 aaPredicted RBP24.02■■□□□ 1.44
PDLIM4-205ENST00000463615 C9orf50Q5SZB4 431 aa24.02■■□□□ 1.44
PDLIM4-205ENST00000463615 NOL8Q76FK4 1167 aaKnown RBP24.02■■□□□ 1.44
PDLIM4-205ENST00000463615 FAM126BQ8IXS8 530 aa24.02■■□□□ 1.44
PDLIM4-205ENST00000463615 ADGRF4Q8IZF3 695 aa24.02■■□□□ 1.44
PDLIM4-205ENST00000463615 MTMR10Q9NXD2 777 aa24.02■■□□□ 1.44
PDLIM4-205ENST00000463615 U3KPZ7 1027 aaPredicted RBP24.02■■□□□ 1.44
PDLIM4-205ENST00000463615 ABCB11O95342 1321 aa24.02■■□□□ 1.44
PDLIM4-205ENST00000463615 SGSM2O43147 1006 aa24.01■■□□□ 1.43
PDLIM4-205ENST00000463615 DYNC1LI2O43237 492 aaPredicted RBP24.01■■□□□ 1.43
PDLIM4-205ENST00000463615 ZEB2O60315 1214 aa24.01■■□□□ 1.43
PDLIM4-205ENST00000463615 TIMP1P01033 207 aa24.01■■□□□ 1.43
PDLIM4-205ENST00000463615 PARP1P09874 1014 aaKnown RBP24.01■■□□□ 1.43
PDLIM4-205ENST00000463615 CALML3P27482 149 aa24.01■■□□□ 1.43
PDLIM4-205ENST00000463615 KIAA1211Q6ZU35 1233 aa24.01■■□□□ 1.43
PDLIM4-205ENST00000463615 EEPD1Q7L9B9 569 aa24.01■■□□□ 1.43
PDLIM4-205ENST00000463615 MPHOSPH6Q99547 160 aaKnown RBP24.01■■□□□ 1.43
PDLIM4-205ENST00000463615 CPVLQ9H3G5 476 aa24.01■■□□□ 1.43
PDLIM4-205ENST00000463615 CD4P01730 458 aa24■■□□□ 1.43
PDLIM4-205ENST00000463615 CYP21A2P08686 494 aa24■■□□□ 1.43
PDLIM4-205ENST00000463615 PTH1RQ03431 593 aa24■■□□□ 1.43
PDLIM4-205ENST00000463615 IFIT1BQ5T764 474 aaKnown RBP24■■□□□ 1.43
PDLIM4-205ENST00000463615 CXCL17Q6UXB2 119 aa24■■□□□ 1.43
PDLIM4-205ENST00000463615 CYB5R4Q7L1T6 521 aa24■■□□□ 1.43
PDLIM4-205ENST00000463615 B4DLN1 442 aa23.99■■□□□ 1.43
PDLIM4-205ENST00000463615 MRPL12P52815 198 aaKnown RBP23.99■■□□□ 1.43
PDLIM4-205ENST00000463615 FPGSQ05932 587 aa23.99■■□□□ 1.43
PDLIM4-205ENST00000463615 TRDNQ13061 729 aa23.99■■□□□ 1.43
PDLIM4-205ENST00000463615 TMEM63BQ5T3F8 832 aa23.99■■□□□ 1.43
PDLIM4-205ENST00000463615 Q7L0L9 218 aa23.99■■□□□ 1.43
PDLIM4-205ENST00000463615 VTI1AQ96AJ9 217 aa23.99■■□□□ 1.43
PDLIM4-205ENST00000463615 WDR11Q9BZH6 1224 aa23.99■■□□□ 1.43
PDLIM4-205ENST00000463615 JMJD4Q9H9V9 463 aa23.99■■□□□ 1.43
PDLIM4-205ENST00000463615 NKRFO15226 690 aaKnown RBP eCLIP23.98■■□□□ 1.43
PDLIM4-205ENST00000463615 TLR3O15455 904 aaKnown RBP23.98■■□□□ 1.43
PDLIM4-205ENST00000463615 EPHB4P54760 987 aa23.98■■□□□ 1.43
PDLIM4-205ENST00000463615 SMAD3P84022 425 aaKnown RBP23.98■■□□□ 1.43
PDLIM4-205ENST00000463615 QRICH1Q2TAL8 776 aa23.98■■□□□ 1.43
PDLIM4-205ENST00000463615 USH1GQ495M9 461 aa23.98■■□□□ 1.43
PDLIM4-205ENST00000463615 MFSD5Q6N075 450 aa23.98■■□□□ 1.43
PDLIM4-205ENST00000463615 MTMR8Q96EF0 704 aa23.98■■□□□ 1.43
PDLIM4-205ENST00000463615 GRIN2DO15399 1336 aa23.97■■□□□ 1.43
PDLIM4-205ENST00000463615 PTGS1P23219 599 aa23.97■■□□□ 1.43
PDLIM4-205ENST00000463615 GHRHRQ02643 423 aa23.97■■□□□ 1.43
PDLIM4-205ENST00000463615 PDE4DQ08499 809 aa23.97■■□□□ 1.43
PDLIM4-205ENST00000463615 MCF2L2Q86YR7 1114 aa23.97■■□□□ 1.43
PDLIM4-205ENST00000463615 SCFD2Q8WU76 684 aa23.97■■□□□ 1.43
PDLIM4-205ENST00000463615 MAP4K1Q92918 833 aa23.97■■□□□ 1.43
PDLIM4-205ENST00000463615 STXBP5LQ9Y2K9 1186 aa23.97■■□□□ 1.43
PDLIM4-205ENST00000463615 MRPL11Q9Y3B7 192 aaKnown RBP23.97■■□□□ 1.43
PDLIM4-205ENST00000463615 PALM3A6NDB9 673 aaPredicted RBP23.96■■□□□ 1.43
PDLIM4-205ENST00000463615 ITGA7Q13683 1181 aa23.96■■□□□ 1.43
PDLIM4-205ENST00000463615 FBXO11Q86XK2 927 aa23.96■■□□□ 1.43
PDLIM4-205ENST00000463615 STAG2Q8N3U4 1231 aa23.96■■□□□ 1.43
PDLIM4-205ENST00000463615 SYTL5Q8TDW5 730 aaPredicted RBP23.96■■□□□ 1.43
PDLIM4-205ENST00000463615 MAD2L2Q9UI95 211 aa23.96■■□□□ 1.43
PDLIM4-205ENST00000463615 CPT1AP50416 773 aa23.95■■□□□ 1.42
PDLIM4-205ENST00000463615 POLR3EQ9NVU0 708 aa23.95■■□□□ 1.42
PDLIM4-205ENST00000463615 KLRF2D3W0D1 207 aa23.94■■□□□ 1.42
PDLIM4-205ENST00000463615 E7EWF7 191 aa23.94■■□□□ 1.42
PDLIM4-205ENST00000463615 PPIGQ13427 754 aaKnown RBP eCLIP23.94■■□□□ 1.42
PDLIM4-205ENST00000463615 NCOA7Q8NI08 942 aa23.94■■□□□ 1.42
PDLIM4-205ENST00000463615 NSUN6Q8TEA1 469 aaKnown RBP23.94■■□□□ 1.42
PDLIM4-205ENST00000463615 TBC1D5Q92609 795 aa23.94■■□□□ 1.42
PDLIM4-205ENST00000463615 IWS1Q96ST2 819 aa23.94■■□□□ 1.42
PDLIM4-205ENST00000463615 AMNQ9BXJ7 453 aa23.94■■□□□ 1.42
PDLIM4-205ENST00000463615 MAP3K20Q9NYL2 800 aaKnown RBP23.94■■□□□ 1.42
PDLIM4-205ENST00000463615 A6NJR5 290 aa23.93■■□□□ 1.42
PDLIM4-205ENST00000463615 PURAQ00577 322 aaKnown RBP23.93■■□□□ 1.42
PDLIM4-205ENST00000463615 GRM4Q14833 912 aa23.93■■□□□ 1.42
PDLIM4-205ENST00000463615 PPP2R5BQ15173 497 aa23.93■■□□□ 1.42
PDLIM4-205ENST00000463615 STOX1Q6ZVD7 989 aa23.93■■□□□ 1.42
PDLIM4-205ENST00000463615 SAMD3Q8N6K7 520 aa23.93■■□□□ 1.42
PDLIM4-205ENST00000463615 RNPC3Q96LT9 517 aaKnown RBP23.93■■□□□ 1.42
PDLIM4-205ENST00000463615 MTA3Q9BTC8 594 aa23.93■■□□□ 1.42
PDLIM4-205ENST00000463615 COL20A1Q9P218 1284 aa23.93■■□□□ 1.42
PDLIM4-205ENST00000463615 TAF6LQ9Y6J9 622 aa23.93■■□□□ 1.42
PDLIM4-205ENST00000463615 ZBTB5O15062 677 aa23.92■■□□□ 1.42
PDLIM4-205ENST00000463615 HSD17B4P51659 736 aa23.92■■□□□ 1.42
PDLIM4-205ENST00000463615 TROAPQ12815 778 aa23.92■■□□□ 1.42
PDLIM4-205ENST00000463615 TTLL4Q14679 1199 aa23.92■■□□□ 1.42
PDLIM4-205ENST00000463615 CCDC62Q6P9F0 684 aa23.92■■□□□ 1.42
PDLIM4-205ENST00000463615 RALYLQ86SE5 291 aaKnown RBP23.92■■□□□ 1.42
PDLIM4-205ENST00000463615 TMEM199Q8N511 208 aa23.92■■□□□ 1.42
PDLIM4-205ENST00000463615 TAAR1Q96RJ0 339 aa23.92■■□□□ 1.42
PDLIM4-205ENST00000463615 RIOX1Q9H6W3 641 aa23.92■■□□□ 1.42
PDLIM4-205ENST00000463615 VAT1LQ9HCJ6 419 aa23.92■■□□□ 1.42
PDLIM4-205ENST00000463615 MYH6P13533 1939 aa23.91■■□□□ 1.42
PDLIM4-205ENST00000463615 ERICH2A1L162 156 aa23.91■■□□□ 1.42
PDLIM4-205ENST00000463615 OPLAHO14841 1288 aa23.91■■□□□ 1.42
PDLIM4-205ENST00000463615 IFIT3O14879 490 aaKnown RBP23.91■■□□□ 1.42
PDLIM4-205ENST00000463615 DHX16O60231 1041 aaKnown RBP23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms