RNA–Protein interactions for RNA: ENST00000462668.5

SMC4-203, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 4,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-203ENST00000462668 KPNA6O60684 536 aa3.87□□□□□ -1.79
SMC4-203ENST00000462668 TUSC2O75896 110 aa3.87□□□□□ -1.79
SMC4-203ENST00000462668 NEK4P51957 841 aa3.87□□□□□ -1.79
SMC4-203ENST00000462668 POMZP3Q6PJE2 187 aa3.87□□□□□ -1.79
SMC4-203ENST00000462668 LBX2Q6XYB7 198 aa3.87□□□□□ -1.79
SMC4-203ENST00000462668 ELMO3Q96BJ8 720 aa3.87□□□□□ -1.79
SMC4-203ENST00000462668 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.87□□□□□ -1.79
SMC4-203ENST00000462668 PIP5K1CO60331 668 aa3.87□□□□□ -1.79
SMC4-203ENST00000462668 PYGMP11217 842 aa3.87□□□□□ -1.79
SMC4-203ENST00000462668 MTNR1BP49286 362 aa3.87□□□□□ -1.79
SMC4-203ENST00000462668 FOXD4L6Q3SYB3 417 aaPredicted RBP3.87□□□□□ -1.79
SMC4-203ENST00000462668 TMEM177Q53S58 311 aa3.87□□□□□ -1.79
SMC4-203ENST00000462668 EXOSC6Q5RKV6 272 aaKnown RBP3.87□□□□□ -1.79
SMC4-203ENST00000462668 FOXD4L3Q6VB84 417 aaPredicted RBP3.87□□□□□ -1.79
SMC4-203ENST00000462668 FAM214BQ7L5A3 538 aa3.87□□□□□ -1.79
SMC4-203ENST00000462668 PTPN18Q99952 460 aa3.87□□□□□ -1.79
SMC4-203ENST00000462668 TMEM60Q9H2L4 133 aa3.87□□□□□ -1.79
SMC4-203ENST00000462668 HOXB4P17483 251 aaPredicted RBP3.87□□□□□ -1.79
SMC4-203ENST00000462668 TCIRG1Q13488 830 aa3.87□□□□□ -1.79
SMC4-203ENST00000462668 IFNL2Q8IZJ0 200 aa3.87□□□□□ -1.79
SMC4-203ENST00000462668 PCDH19Q8TAB3 1148 aa3.87□□□□□ -1.79
SMC4-203ENST00000462668 IPO9Q96P70 1041 aaKnown RBP3.87□□□□□ -1.79
SMC4-203ENST00000462668 PLCB1Q9NQ66 1216 aa3.87□□□□□ -1.79
SMC4-203ENST00000462668 MAN1C1Q9NR34 630 aa3.87□□□□□ -1.79
SMC4-203ENST00000462668 TRMT13Q9NUP7 481 aaKnown RBP3.87□□□□□ -1.79
SMC4-203ENST00000462668 INTUQ9ULD6 942 aa3.87□□□□□ -1.79
SMC4-203ENST00000462668 ZNF561-AS1K7EIQ3 104 aa3.86□□□□□ -1.79
SMC4-203ENST00000462668 DVL2O14641 736 aa3.86□□□□□ -1.79
SMC4-203ENST00000462668 ADH6P28332 368 aa3.86□□□□□ -1.79
SMC4-203ENST00000462668 RASSF7Q02833 373 aa3.86□□□□□ -1.79
SMC4-203ENST00000462668 PPM1JQ5JR12 505 aa3.86□□□□□ -1.79
SMC4-203ENST00000462668 DGKKQ5KSL6 1271 aa3.86□□□□□ -1.79
SMC4-203ENST00000462668 TDRD10Q5VZ19 366 aaKnown RBP3.86□□□□□ -1.79
SMC4-203ENST00000462668 SEZ6L2Q6UXD5 910 aa3.86□□□□□ -1.79
SMC4-203ENST00000462668 DTWD1Q8N5C7 304 aa3.86□□□□□ -1.79
SMC4-203ENST00000462668 EFHBQ8N7U6 833 aa3.86□□□□□ -1.79
SMC4-203ENST00000462668 CHST14Q8NCH0 376 aa3.86□□□□□ -1.79
SMC4-203ENST00000462668 CHTF18Q8WVB6 975 aa3.86□□□□□ -1.79
SMC4-203ENST00000462668 CLIP3Q96DZ5 547 aa3.86□□□□□ -1.79
SMC4-203ENST00000462668 SERINC2Q96SA4 455 aa3.86□□□□□ -1.79
SMC4-203ENST00000462668 MMP19Q99542 508 aa3.86□□□□□ -1.79
SMC4-203ENST00000462668 NLRC4Q9NPP4 1024 aa3.86□□□□□ -1.79
SMC4-203ENST00000462668 ATP13A2Q9NQ11 1180 aa3.86□□□□□ -1.79
SMC4-203ENST00000462668 IP6K2Q9UHH9 426 aa3.86□□□□□ -1.79
SMC4-203ENST00000462668 LRIG2O94898 1065 aa3.86□□□□□ -1.79
SMC4-203ENST00000462668 CFBP00751 764 aa3.86□□□□□ -1.79
SMC4-203ENST00000462668 CEBPAP49715 358 aaPredicted RBP3.86□□□□□ -1.79
SMC4-203ENST00000462668 SCNN1BP51168 640 aa3.86□□□□□ -1.79
SMC4-203ENST00000462668 GTF2A2P52657 109 aa3.86□□□□□ -1.79
SMC4-203ENST00000462668 CABP4P57796 275 aa3.86□□□□□ -1.79
SMC4-203ENST00000462668 LVRNQ6Q4G3 990 aa3.86□□□□□ -1.79
SMC4-203ENST00000462668 CCDC103Q8IW40 242 aa3.86□□□□□ -1.79
SMC4-203ENST00000462668 MICALL1Q8N3F8 863 aa3.86□□□□□ -1.79
SMC4-203ENST00000462668 IL22RA1Q8N6P7 574 aa3.86□□□□□ -1.79
SMC4-203ENST00000462668 MYRIPQ8NFW9 859 aa3.86□□□□□ -1.79
SMC4-203ENST00000462668 HSPBAP1Q96EW2 488 aa3.86□□□□□ -1.79
SMC4-203ENST00000462668 MAGEB10Q96LZ2 347 aaPredicted RBP3.86□□□□□ -1.79
SMC4-203ENST00000462668 FGD4Q96M96 766 aa3.86□□□□□ -1.79
SMC4-203ENST00000462668 SELENOOQ9BVL4 669 aa3.86□□□□□ -1.79
SMC4-203ENST00000462668 AAASQ9NRG9 546 aa3.86□□□□□ -1.79
SMC4-203ENST00000462668 MAP3K20Q9NYL2 800 aaKnown RBP3.86□□□□□ -1.79
SMC4-203ENST00000462668 ITGA4P13612 1032 aa3.86□□□□□ -1.79
SMC4-203ENST00000462668 NID1P14543 1247 aa3.86□□□□□ -1.79
SMC4-203ENST00000462668 AGFG1P52594 562 aaKnown RBP3.86□□□□□ -1.79
SMC4-203ENST00000462668 PTPN21Q16825 1174 aa3.86□□□□□ -1.79
SMC4-203ENST00000462668 ATP13A4Q4VNC1 1196 aa3.86□□□□□ -1.79
SMC4-203ENST00000462668 MSL1Q68DK7 614 aa3.86□□□□□ -1.79
SMC4-203ENST00000462668 Q6ZS46 218 aa3.86□□□□□ -1.79
SMC4-203ENST00000462668 OVCH2Q7RTZ1 564 aa3.86□□□□□ -1.79
SMC4-203ENST00000462668 KCNK18Q7Z418 384 aa3.86□□□□□ -1.79
SMC4-203ENST00000462668 ENAHQ8N8S7 591 aaPredicted RBP3.86□□□□□ -1.79
SMC4-203ENST00000462668 OR10H5Q8NGA6 315 aa3.86□□□□□ -1.79
SMC4-203ENST00000462668 KLHDC7BQ96G42 594 aa3.86□□□□□ -1.79
SMC4-203ENST00000462668 FAM193BQ96PV7 902 aaPredicted RBP3.86□□□□□ -1.79
SMC4-203ENST00000462668 FOXQ1Q9C009 403 aa3.86□□□□□ -1.79
SMC4-203ENST00000462668 OXSMQ9NWU1 459 aa3.86□□□□□ -1.79
SMC4-203ENST00000462668 KLHL3Q9UH77 587 aa3.86□□□□□ -1.79
SMC4-203ENST00000462668 SPDYE3A6NKU9 549 aa3.85□□□□□ -1.79
SMC4-203ENST00000462668 WDHD1O75717 1129 aaPredicted RBP3.85□□□□□ -1.79
SMC4-203ENST00000462668 PF4V1P10720 104 aa3.85□□□□□ -1.79
SMC4-203ENST00000462668 ZKSCAN1P17029 563 aaPredicted RBP3.85□□□□□ -1.79
SMC4-203ENST00000462668 ADKP55263 362 aaKnown RBP3.85□□□□□ -1.79
SMC4-203ENST00000462668 HNRNPUQ00839 825 aaKnown RBP eCLIP3.85□□□□□ -1.79
SMC4-203ENST00000462668 RCSD1Q6JBY9 416 aa3.85□□□□□ -1.79
SMC4-203ENST00000462668 SLCO4C1Q6ZQN7 724 aa3.85□□□□□ -1.79
SMC4-203ENST00000462668 RASSF3Q86WH2 238 aa3.85□□□□□ -1.79
SMC4-203ENST00000462668 DLG3Q92796 817 aa3.85□□□□□ -1.79
SMC4-203ENST00000462668 WNK4Q96J92 1243 aa3.85□□□□□ -1.79
SMC4-203ENST00000462668 LACRTQ9GZZ8 138 aa3.85□□□□□ -1.79
SMC4-203ENST00000462668 SAGE1Q9NXZ1 904 aa3.85□□□□□ -1.79
SMC4-203ENST00000462668 ADGRE2Q9UHX3 823 aa3.85□□□□□ -1.79
SMC4-203ENST00000462668 NISCHQ9Y2I1 1504 aa3.85□□□□□ -1.79
SMC4-203ENST00000462668 LINC01387J3KSC0 135 aa3.85□□□□□ -1.79
SMC4-203ENST00000462668 GPR25O00155 361 aa3.85□□□□□ -1.79
SMC4-203ENST00000462668 WASP42768 502 aa3.85□□□□□ -1.79
SMC4-203ENST00000462668 SEMA5AQ13591 1074 aa3.85□□□□□ -1.79
SMC4-203ENST00000462668 BRD3Q15059 726 aa3.85□□□□□ -1.79
SMC4-203ENST00000462668 KCNT2Q6UVM3 1135 aa3.85□□□□□ -1.79
SMC4-203ENST00000462668 C16orf59Q7L2K0 433 aa3.85□□□□□ -1.79
SMC4-203ENST00000462668 DDX53Q86TM3 631 aaKnown RBP3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms