RNA–Protein interactions for RNA: ENST00000462335.1

PKP4-208, Transcript of plakophilin 4, humanhuman

TSL 4

Gene PKP4, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-208ENST00000462335 PLEKHA8P1O95397 391 aa11.04□□□□□ -0.64
PKP4-208ENST00000462335 TAL1P17542 331 aaPredicted RBP11.04□□□□□ -0.64
PKP4-208ENST00000462335 RCAN1P53805 252 aa11.04□□□□□ -0.64
PKP4-208ENST00000462335 RPS6P62753 249 aaKnown RBP11.04□□□□□ -0.64
PKP4-208ENST00000462335 STK3Q13188 491 aa11.04□□□□□ -0.64
PKP4-208ENST00000462335 ACVR2BQ13705 512 aa11.04□□□□□ -0.64
PKP4-208ENST00000462335 TMTC3Q6ZXV5 915 aa11.04□□□□□ -0.64
PKP4-208ENST00000462335 ARMCX2Q7L311 632 aa11.04□□□□□ -0.64
PKP4-208ENST00000462335 FCHSD1Q86WN1 690 aa11.04□□□□□ -0.64
PKP4-208ENST00000462335 SRBD1Q8N5C6 995 aaKnown RBP11.04□□□□□ -0.64
PKP4-208ENST00000462335 SAMD3Q8N6K7 520 aa11.04□□□□□ -0.64
PKP4-208ENST00000462335 DNERQ8NFT8 737 aa11.04□□□□□ -0.64
PKP4-208ENST00000462335 NSUN6Q8TEA1 469 aaKnown RBP11.04□□□□□ -0.64
PKP4-208ENST00000462335 RMDN3Q96TC7 470 aa11.04□□□□□ -0.64
PKP4-208ENST00000462335 C22orf23Q9BZE7 217 aa11.04□□□□□ -0.64
PKP4-208ENST00000462335 AP5M1Q9H0R1 490 aa11.04□□□□□ -0.64
PKP4-208ENST00000462335 EHMT1Q9H9B1 1298 aa11.04□□□□□ -0.64
PKP4-208ENST00000462335 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.04□□□□□ -0.64
PKP4-208ENST00000462335 MAP3K20Q9NYL2 800 aaKnown RBP11.04□□□□□ -0.64
PKP4-208ENST00000462335 DDX20Q9UHI6 824 aaKnown RBP11.04□□□□□ -0.64
PKP4-208ENST00000462335 hCG_1642624A0A1W2PR95 340 aa11.03□□□□□ -0.64
PKP4-208ENST00000462335 KBTBD13C9JR72 458 aa11.03□□□□□ -0.64
PKP4-208ENST00000462335 SEPT4O43236 478 aa11.03□□□□□ -0.64
PKP4-208ENST00000462335 FARP2O94887 1054 aaPredicted RBP11.03□□□□□ -0.64
PKP4-208ENST00000462335 AKR1A1P14550 325 aa11.03□□□□□ -0.64
PKP4-208ENST00000462335 NAPAP54920 295 aa11.03□□□□□ -0.64
PKP4-208ENST00000462335 SSRP1Q08945 709 aaKnown RBP11.03□□□□□ -0.64
PKP4-208ENST00000462335 ANO1Q5XXA6 986 aa11.03□□□□□ -0.64
PKP4-208ENST00000462335 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.03□□□□□ -0.644e-7■■■■■ 39.9
PKP4-208ENST00000462335 EEPD1Q7L9B9 569 aa11.03□□□□□ -0.64
PKP4-208ENST00000462335 NECAB2Q7Z6G3 386 aa11.03□□□□□ -0.64
PKP4-208ENST00000462335 RNF180Q86T96 592 aa11.03□□□□□ -0.64
PKP4-208ENST00000462335 FAM133AQ8N9E0 248 aa11.03□□□□□ -0.64
PKP4-208ENST00000462335 CCDC12Q8WUD4 166 aaPredicted RBP11.03□□□□□ -0.64
PKP4-208ENST00000462335 CLEC4DQ8WXI8 215 aa11.03□□□□□ -0.64
PKP4-208ENST00000462335 DPF3Q92784 378 aa11.03□□□□□ -0.64
PKP4-208ENST00000462335 VTI1AQ96AJ9 217 aa11.03□□□□□ -0.64
PKP4-208ENST00000462335 ZNF274Q96GC6 653 aaPredicted RBP11.03□□□□□ -0.64
PKP4-208ENST00000462335 LARP6Q9BRS8 491 aaKnown RBP11.03□□□□□ -0.64
PKP4-208ENST00000462335 HTATIP2Q9BUP3 242 aa11.03□□□□□ -0.64
PKP4-208ENST00000462335 PSTPIP2Q9H939 334 aa11.03□□□□□ -0.64
PKP4-208ENST00000462335 PAK6Q9NQU5 681 aaPredicted RBP11.03□□□□□ -0.64
PKP4-208ENST00000462335 PLXNA1Q9UIW2 1896 aa11.03□□□□□ -0.64
PKP4-208ENST00000462335 KIAA0100Q14667 2235 aaKnown RBP11.03□□□□□ -0.64
PKP4-208ENST00000462335 LOC102724159A0A0B4J2E5 919 aa11.02□□□□□ -0.65
PKP4-208ENST00000462335 SOWAHBA6NEL2 793 aa11.02□□□□□ -0.65
PKP4-208ENST00000462335 SPDYE3A6NKU9 549 aa11.02□□□□□ -0.65
PKP4-208ENST00000462335 CYTH3O43739 400 aa11.02□□□□□ -0.65
PKP4-208ENST00000462335 SEC24BO95487 1268 aa11.02□□□□□ -0.65
PKP4-208ENST00000462335 MYCLP12524 364 aaPredicted RBP11.02□□□□□ -0.65
PKP4-208ENST00000462335 PDIA3P30101 505 aaKnown RBP11.02□□□□□ -0.65
PKP4-208ENST00000462335 ADD1P35611 737 aaKnown RBP11.02□□□□□ -0.65
PKP4-208ENST00000462335 ALDH5A1P51649 535 aaPredicted RBP11.02□□□□□ -0.65
PKP4-208ENST00000462335 TNFAIP2Q03169 654 aa11.02□□□□□ -0.65
PKP4-208ENST00000462335 PWP2Q15269 919 aaKnown RBP11.02□□□□□ -0.65
PKP4-208ENST00000462335 STXBP2Q15833 593 aa11.02□□□□□ -0.65
PKP4-208ENST00000462335 BRDTQ58F21 947 aaPredicted RBP11.02□□□□□ -0.65
PKP4-208ENST00000462335 MAP3K21Q5TCX8 1036 aa11.02□□□□□ -0.65
PKP4-208ENST00000462335 IQSEC1Q6DN90 963 aa11.02□□□□□ -0.65
PKP4-208ENST00000462335 MAMDC4Q6UXC1 1216 aa11.02□□□□□ -0.65
PKP4-208ENST00000462335 SLC30A10Q6XR72 485 aa11.02□□□□□ -0.65
PKP4-208ENST00000462335 FBXL16Q8N461 479 aa11.02□□□□□ -0.65
PKP4-208ENST00000462335 ANKLE1Q8NAG6 615 aa11.02□□□□□ -0.65
PKP4-208ENST00000462335 MTMR8Q96EF0 704 aa11.02□□□□□ -0.65
PKP4-208ENST00000462335 IWS1Q96ST2 819 aa11.02□□□□□ -0.65
PKP4-208ENST00000462335 SLC26A6Q9BXS9 759 aa11.02□□□□□ -0.65
PKP4-208ENST00000462335 GLT8D2Q9H1C3 349 aa11.02□□□□□ -0.65
PKP4-208ENST00000462335 XPNPEP3Q9NQH7 507 aa11.02□□□□□ -0.65
PKP4-208ENST00000462335 ZNF236Q9UL36 1845 aa11.01□□□□□ -0.65
PKP4-208ENST00000462335 ST18O60284 1047 aa11.01□□□□□ -0.65
PKP4-208ENST00000462335 ZEB2O60315 1214 aa11.01□□□□□ -0.65
PKP4-208ENST00000462335 CYBAP13498 195 aa11.01□□□□□ -0.65
PKP4-208ENST00000462335 XBP1P17861 261 aa11.01□□□□□ -0.65
PKP4-208ENST00000462335 EIF2AK2P19525 551 aaKnown RBP11.01□□□□□ -0.65
PKP4-208ENST00000462335 HOXA13P31271 388 aaPredicted RBP11.01□□□□□ -0.65
PKP4-208ENST00000462335 CCDC144BQ3MJ40 725 aa11.01□□□□□ -0.65
PKP4-208ENST00000462335 C8orf34Q49A92 452 aa11.01□□□□□ -0.65
PKP4-208ENST00000462335 SYTL5Q8TDW5 730 aaPredicted RBP11.01□□□□□ -0.65
PKP4-208ENST00000462335 TAAR1Q96RJ0 339 aa11.01□□□□□ -0.65
PKP4-208ENST00000462335 VTA1Q9NP79 307 aa11.01□□□□□ -0.65
PKP4-208ENST00000462335 hCG_1984214I3L0E3 225 aa11□□□□□ -0.65
PKP4-208ENST00000462335 SNAI1O95863 264 aaPredicted RBP11□□□□□ -0.65
PKP4-208ENST00000462335 C6orf222P0C671 652 aaPredicted RBP11□□□□□ -0.65
PKP4-208ENST00000462335 CDC27P30260 824 aa11□□□□□ -0.65
PKP4-208ENST00000462335 CCND2P30279 289 aa11□□□□□ -0.65
PKP4-208ENST00000462335 ADCY7P51828 1080 aa11□□□□□ -0.65
PKP4-208ENST00000462335 COL9A3Q14050 684 aaPredicted RBP11□□□□□ -0.65
PKP4-208ENST00000462335 SEPT14Q6ZU15 432 aa11□□□□□ -0.65
PKP4-208ENST00000462335 ZNF713Q8N859 430 aaPredicted RBP11□□□□□ -0.65
PKP4-208ENST00000462335 BICD2Q8TD16 824 aa11□□□□□ -0.65
PKP4-208ENST00000462335 TBC1D5Q92609 795 aa11□□□□□ -0.65
PKP4-208ENST00000462335 PURBQ96QR8 312 aaKnown RBP11□□□□□ -0.65
PKP4-208ENST00000462335 WDR11Q9BZH6 1224 aa11□□□□□ -0.65
PKP4-208ENST00000462335 NCOA5Q9HCD5 579 aaKnown RBP11□□□□□ -0.65
PKP4-208ENST00000462335 C6orf50Q9HD87 102 aa11□□□□□ -0.65
PKP4-208ENST00000462335 SMCHD1A6NHR9 2005 aa10.99□□□□□ -0.65
PKP4-208ENST00000462335 SMCO2A6NFE2 343 aa10.99□□□□□ -0.65
PKP4-208ENST00000462335 DYNC1LI2O43237 492 aaPredicted RBP10.99□□□□□ -0.65
PKP4-208ENST00000462335 PRPF3O43395 683 aaKnown RBP10.99□□□□□ -0.65
PKP4-208ENST00000462335 PPP1R11O60927 126 aaPredicted RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms