RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 MRPL12P52815 198 aaKnown RBP12.26□□□□□ -0.45
TRAPPC12-213ENST00000461577 APOBRQ0VD83 1088 aa12.26□□□□□ -0.45
TRAPPC12-213ENST00000461577 ACVR2BQ13705 512 aa12.26□□□□□ -0.45
TRAPPC12-213ENST00000461577 SLC35G1Q2M3R5 365 aa12.26□□□□□ -0.45
TRAPPC12-213ENST00000461577 RUFY3Q7L099 469 aa12.26□□□□□ -0.45
TRAPPC12-213ENST00000461577 NECAB2Q7Z6G3 386 aa12.26□□□□□ -0.45
TRAPPC12-213ENST00000461577 SRBD1Q8N5C6 995 aaKnown RBP12.26□□□□□ -0.45
TRAPPC12-213ENST00000461577 BRF1Q92994 677 aa12.26□□□□□ -0.45
TRAPPC12-213ENST00000461577 PURBQ96QR8 312 aaKnown RBP12.26□□□□□ -0.45
TRAPPC12-213ENST00000461577 TM6SF1Q9BZW5 370 aa12.26□□□□□ -0.45
TRAPPC12-213ENST00000461577 ZSWIM6Q9HCJ5 1215 aa12.26□□□□□ -0.45
TRAPPC12-213ENST00000461577 BRPF3Q9ULD4 1205 aa12.26□□□□□ -0.45
TRAPPC12-213ENST00000461577 FAM184BQ9ULE4 1060 aa12.26□□□□□ -0.45
TRAPPC12-213ENST00000461577 LOC102724159A0A0B4J2E5 919 aa12.25□□□□□ -0.45
TRAPPC12-213ENST00000461577 PPP1R11O60927 126 aaPredicted RBP12.25□□□□□ -0.45
TRAPPC12-213ENST00000461577 CFBP00751 764 aa12.25□□□□□ -0.45
TRAPPC12-213ENST00000461577 MYCNP04198 464 aaPredicted RBP12.25□□□□□ -0.45
TRAPPC12-213ENST00000461577 PWP2Q15269 919 aaKnown RBP12.25□□□□□ -0.45
TRAPPC12-213ENST00000461577 TMTC3Q6ZXV5 915 aa12.25□□□□□ -0.45
TRAPPC12-213ENST00000461577 CMTR1Q8N1G2 835 aaKnown RBP12.25□□□□□ -0.45
TRAPPC12-213ENST00000461577 CCDC82Q8N4S0 544 aa12.25□□□□□ -0.45
TRAPPC12-213ENST00000461577 ARRDC4Q8NCT1 418 aa12.25□□□□□ -0.45
TRAPPC12-213ENST00000461577 DNERQ8NFT8 737 aa12.25□□□□□ -0.45
TRAPPC12-213ENST00000461577 TBC1D5Q92609 795 aa12.25□□□□□ -0.45
TRAPPC12-213ENST00000461577 PAWRQ96IZ0 340 aaKnown RBP12.25□□□□□ -0.45
TRAPPC12-213ENST00000461577 HTATIP2Q9BUP3 242 aa12.25□□□□□ -0.45
TRAPPC12-213ENST00000461577 ASTN1O14525 1302 aa12.24□□□□□ -0.45
TRAPPC12-213ENST00000461577 METAP2P50579 478 aaKnown RBP eCLIP12.24□□□□□ -0.45
TRAPPC12-213ENST00000461577 RCAN1P53805 252 aa12.24□□□□□ -0.45
TRAPPC12-213ENST00000461577 ANAPC15P60006 121 aa12.24□□□□□ -0.45
TRAPPC12-213ENST00000461577 PDE4DQ08499 809 aa12.24□□□□□ -0.45
TRAPPC12-213ENST00000461577 CCDC144BQ3MJ40 725 aa12.24□□□□□ -0.45
TRAPPC12-213ENST00000461577 EEPD1Q7L9B9 569 aa12.24□□□□□ -0.45
TRAPPC12-213ENST00000461577 UBE2Q1Q7Z7E8 422 aa12.24□□□□□ -0.45
TRAPPC12-213ENST00000461577 FBXL16Q8N461 479 aa12.24□□□□□ -0.45
TRAPPC12-213ENST00000461577 SAMD3Q8N6K7 520 aa12.24□□□□□ -0.45
TRAPPC12-213ENST00000461577 SYTL5Q8TDW5 730 aaPredicted RBP12.24□□□□□ -0.45
TRAPPC12-213ENST00000461577 DIS3LQ8TF46 1054 aaKnown RBP12.24□□□□□ -0.45
TRAPPC12-213ENST00000461577 C11orf49Q9H6J7 331 aa12.24□□□□□ -0.45
TRAPPC12-213ENST00000461577 XPNPEP3Q9NQH7 507 aa12.24□□□□□ -0.45
TRAPPC12-213ENST00000461577 BRCA2P51587 3418 aa12.24□□□□□ -0.45
TRAPPC12-213ENST00000461577 LRRC37A2A6NM11 1700 aa12.23□□□□□ -0.45
TRAPPC12-213ENST00000461577 CCDC196A0A1B0GTZ2 297 aa12.23□□□□□ -0.45
TRAPPC12-213ENST00000461577 KBTBD13C9JR72 458 aa12.23□□□□□ -0.45
TRAPPC12-213ENST00000461577 GCOM1H8Y6P7 765 aaPredicted RBP12.23□□□□□ -0.45
TRAPPC12-213ENST00000461577 POLR2MP0CAP2 368 aa12.23□□□□□ -0.45
TRAPPC12-213ENST00000461577 PPP2R5BQ15173 497 aa12.23□□□□□ -0.45
TRAPPC12-213ENST00000461577 GJC2Q5T442 439 aaPredicted RBP12.23□□□□□ -0.45
TRAPPC12-213ENST00000461577 ARHGEF16Q5VV41 709 aa12.23□□□□□ -0.45
TRAPPC12-213ENST00000461577 NOL8Q76FK4 1167 aaKnown RBP12.23□□□□□ -0.45
TRAPPC12-213ENST00000461577 RNF180Q86T96 592 aa12.23□□□□□ -0.45
TRAPPC12-213ENST00000461577 FBXO16Q8IX29 292 aaPredicted RBP12.23□□□□□ -0.45
TRAPPC12-213ENST00000461577 MORC4Q8TE76 937 aa12.23□□□□□ -0.45
TRAPPC12-213ENST00000461577 DPF3Q92784 378 aa12.23□□□□□ -0.45
TRAPPC12-213ENST00000461577 TAAR1Q96RJ0 339 aa12.23□□□□□ -0.45
TRAPPC12-213ENST00000461577 AGXT2Q9BYV1 514 aa12.23□□□□□ -0.45
TRAPPC12-213ENST00000461577 UPF3BQ9BZI7 483 aaKnown RBP12.23□□□□□ -0.45
TRAPPC12-213ENST00000461577 KATNBL1Q9H079 304 aa12.23□□□□□ -0.45
TRAPPC12-213ENST00000461577 SPC25Q9HBM1 224 aa12.23□□□□□ -0.45
TRAPPC12-213ENST00000461577 VTA1Q9NP79 307 aa12.23□□□□□ -0.45
TRAPPC12-213ENST00000461577 PDRG1Q9NUG6 133 aa12.23□□□□□ -0.45
TRAPPC12-213ENST00000461577 MAP3K20Q9NYL2 800 aaKnown RBP12.23□□□□□ -0.45
TRAPPC12-213ENST00000461577 DDX49Q9Y6V7 483 aaKnown RBP12.23□□□□□ -0.45
TRAPPC12-213ENST00000461577 CNTNAP5Q8WYK1 1306 aa12.22□□□□□ -0.45
TRAPPC12-213ENST00000461577 hCG_1642624A0A1W2PR95 340 aa12.22□□□□□ -0.45
TRAPPC12-213ENST00000461577 DNM1LO00429 736 aa12.22□□□□□ -0.45
TRAPPC12-213ENST00000461577 OPLAHO14841 1288 aa12.22□□□□□ -0.45
TRAPPC12-213ENST00000461577 DUSP11O75319 330 aaKnown RBP12.22□□□□□ -0.45
TRAPPC12-213ENST00000461577 SEC24BO95487 1268 aa12.22□□□□□ -0.45
TRAPPC12-213ENST00000461577 PGK1P00558 417 aa12.22□□□□□ -0.45
TRAPPC12-213ENST00000461577 CDC27P30260 824 aa12.22□□□□□ -0.45
TRAPPC12-213ENST00000461577 MNX1P50219 401 aaPredicted RBP12.22□□□□□ -0.45
TRAPPC12-213ENST00000461577 HSD17B4P51659 736 aa12.22□□□□□ -0.45
TRAPPC12-213ENST00000461577 TNFAIP2Q03169 654 aa12.22□□□□□ -0.45
TRAPPC12-213ENST00000461577 IQSEC1Q6DN90 963 aa12.22□□□□□ -0.45
TRAPPC12-213ENST00000461577 NSUN6Q8TEA1 469 aaKnown RBP12.22□□□□□ -0.45
TRAPPC12-213ENST00000461577 CUL5Q93034 780 aa12.22□□□□□ -0.45
TRAPPC12-213ENST00000461577 LENG1Q96BZ8 264 aaPredicted RBP12.22□□□□□ -0.45
TRAPPC12-213ENST00000461577 RMDN3Q96TC7 470 aa12.22□□□□□ -0.45
TRAPPC12-213ENST00000461577 EIF2AK2P19525 551 aaKnown RBP12.21□□□□□ -0.45
TRAPPC12-213ENST00000461577 HOXA13P31271 388 aaPredicted RBP12.21□□□□□ -0.45
TRAPPC12-213ENST00000461577 ADD1P35611 737 aaKnown RBP12.21□□□□□ -0.45
TRAPPC12-213ENST00000461577 ADCYAP1R1P41586 468 aa12.21□□□□□ -0.45
TRAPPC12-213ENST00000461577 CCT2P78371 535 aaKnown RBP12.21□□□□□ -0.45
TRAPPC12-213ENST00000461577 GHRHRQ02643 423 aa12.21□□□□□ -0.45
TRAPPC12-213ENST00000461577 TOB2Q14106 344 aaPredicted RBP12.21□□□□□ -0.45
TRAPPC12-213ENST00000461577 LRRC41Q15345 812 aa12.21□□□□□ -0.45
TRAPPC12-213ENST00000461577 C8orf34Q49A92 452 aa12.21□□□□□ -0.45
TRAPPC12-213ENST00000461577 HEATR3Q7Z4Q2 680 aa12.21□□□□□ -0.45
TRAPPC12-213ENST00000461577 FCHSD1Q86WN1 690 aa12.21□□□□□ -0.45
TRAPPC12-213ENST00000461577 SMARCC2Q8TAQ2 1214 aa12.21□□□□□ -0.45
TRAPPC12-213ENST00000461577 IWS1Q96ST2 819 aa12.21□□□□□ -0.45
TRAPPC12-213ENST00000461577 SENP6Q9GZR1 1112 aaPredicted RBP12.21□□□□□ -0.45
TRAPPC12-213ENST00000461577 PXMP2Q9NR77 195 aa12.21□□□□□ -0.45
TRAPPC12-213ENST00000461577 FAM217BQ9NTX9 383 aaPredicted RBP12.21□□□□□ -0.45
TRAPPC12-213ENST00000461577 COL20A1Q9P218 1284 aa12.21□□□□□ -0.45
TRAPPC12-213ENST00000461577 V9GY48 417 aaPredicted RBP12.21□□□□□ -0.45
TRAPPC12-213ENST00000461577 NID2Q14112 1375 aa12.2□□□□□ -0.46
TRAPPC12-213ENST00000461577 SYNRGQ9UMZ2 1314 aa12.2□□□□□ -0.46
TRAPPC12-213ENST00000461577 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms