RNA–Protein interactions for RNA: ENST00000461574.1

BRCA1-206, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-206ENST00000461574 GABRQQ9UN88 632 aa6.32□□□□□ -1.4
BRCA1-206ENST00000461574 STXBP5LQ9Y2K9 1186 aa6.32□□□□□ -1.4
BRCA1-206ENST00000461574 MROH5Q6ZUA9 1318 aa6.31□□□□□ -1.4
BRCA1-206ENST00000461574 GRM8O00222 908 aa6.31□□□□□ -1.4
BRCA1-206ENST00000461574 SYN1P17600 705 aa6.31□□□□□ -1.4
BRCA1-206ENST00000461574 METTL24Q5JXM2 366 aa6.31□□□□□ -1.4
BRCA1-206ENST00000461574 PERM1Q5SV97 790 aa6.31□□□□□ -1.4
BRCA1-206ENST00000461574 FKBP1CQ5VVH2 108 aa6.31□□□□□ -1.4
BRCA1-206ENST00000461574 FASTKD5Q7L8L6 764 aaKnown RBP6.31□□□□□ -1.4
BRCA1-206ENST00000461574 KRT25Q7Z3Z0 450 aa6.31□□□□□ -1.4
BRCA1-206ENST00000461574 FBXO11Q86XK2 927 aa6.31□□□□□ -1.4
BRCA1-206ENST00000461574 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.31□□□□□ -1.4
BRCA1-206ENST00000461574 TDHQ8IZJ6 230 aa6.31□□□□□ -1.4
BRCA1-206ENST00000461574 WFDC12Q8WWY7 111 aa6.31□□□□□ -1.4
BRCA1-206ENST00000461574 FAM84BQ96KN1 310 aaPredicted RBP6.31□□□□□ -1.4
BRCA1-206ENST00000461574 KRTAP4-12Q9BQ66 201 aa6.31□□□□□ -1.4
BRCA1-206ENST00000461574 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.31□□□□□ -1.4
BRCA1-206ENST00000461574 PICK1Q9NRD5 415 aa6.31□□□□□ -1.4
BRCA1-206ENST00000461574 KLK14Q9P0G3 267 aa6.31□□□□□ -1.4
BRCA1-206ENST00000461574 ATAD5Q96QE3 1844 aa6.3□□□□□ -1.4
BRCA1-206ENST00000461574 F6X3S4 739 aa6.3□□□□□ -1.4
BRCA1-206ENST00000461574 CXCL11O14625 94 aa6.3□□□□□ -1.4
BRCA1-206ENST00000461574 MAP3K6O95382 1288 aa6.3□□□□□ -1.4
BRCA1-206ENST00000461574 TARSP26639 723 aaKnown RBP6.3□□□□□ -1.4
BRCA1-206ENST00000461574 NOS3P29474 1203 aa6.3□□□□□ -1.4
BRCA1-206ENST00000461574 BMP8BP34820 402 aa6.3□□□□□ -1.4
BRCA1-206ENST00000461574 IDH3AP50213 366 aa6.3□□□□□ -1.4
BRCA1-206ENST00000461574 DDX10Q13206 875 aaKnown RBP6.3□□□□□ -1.4
BRCA1-206ENST00000461574 LRIT3Q3SXY7 679 aa6.3□□□□□ -1.4
BRCA1-206ENST00000461574 EPHA10Q5JZY3 1008 aa6.3□□□□□ -1.4
BRCA1-206ENST00000461574 SLC4A10Q6U841 1118 aa6.3□□□□□ -1.4
BRCA1-206ENST00000461574 ZSCAN29Q8IWY8 852 aaPredicted RBP6.3□□□□□ -1.4
BRCA1-206ENST00000461574 DTWD1Q8N5C7 304 aa6.3□□□□□ -1.4
BRCA1-206ENST00000461574 DIS3LQ8TF46 1054 aaKnown RBP6.3□□□□□ -1.4
BRCA1-206ENST00000461574 FAM151AQ8WW52 585 aa6.3□□□□□ -1.4
BRCA1-206ENST00000461574 GDF15Q99988 308 aa6.3□□□□□ -1.4
BRCA1-206ENST00000461574 PAK6Q9NQU5 681 aaPredicted RBP6.3□□□□□ -1.4
BRCA1-206ENST00000461574 SUGT1Q9Y2Z0 365 aa6.3□□□□□ -1.4
BRCA1-206ENST00000461574 MAFBQ9Y5Q3 323 aaPredicted RBP6.3□□□□□ -1.4
BRCA1-206ENST00000461574 ZHX2Q9Y6X8 837 aa6.3□□□□□ -1.4
BRCA1-206ENST00000461574 MYH2Q9UKX2 1941 aa6.3□□□□□ -1.4
BRCA1-206ENST00000461574 VCANP13611 3396 aa6.3□□□□□ -1.4
BRCA1-206ENST00000461574 DOCK3Q8IZD9 2030 aa6.3□□□□□ -1.4
BRCA1-206ENST00000461574 RPTORQ8N122 1335 aa6.29□□□□□ -1.4
BRCA1-206ENST00000461574 A0A0G2JLL6 359 aaPredicted RBP6.29□□□□□ -1.4
BRCA1-206ENST00000461574 HMGCRP04035 888 aa6.29□□□□□ -1.4
BRCA1-206ENST00000461574 IFIT1P09914 478 aaKnown RBP6.29□□□□□ -1.4
BRCA1-206ENST00000461574 MAGEA10P43363 369 aaPredicted RBP6.29□□□□□ -1.4
BRCA1-206ENST00000461574 DPYDQ12882 1025 aa6.29□□□□□ -1.4
BRCA1-206ENST00000461574 PCSK7Q16549 785 aa6.29□□□□□ -1.4
BRCA1-206ENST00000461574 CRTC2Q53ET0 693 aaPredicted RBP6.29□□□□□ -1.4
BRCA1-206ENST00000461574 NOL9Q5SY16 702 aaKnown RBP6.29□□□□□ -1.4
BRCA1-206ENST00000461574 BEND3Q5T5X7 828 aa6.29□□□□□ -1.4
BRCA1-206ENST00000461574 APOBEC3HQ6NTF7 200 aaKnown RBP6.29□□□□□ -1.4
BRCA1-206ENST00000461574 HHIPL2Q6UWX4 724 aa6.29□□□□□ -1.4
BRCA1-206ENST00000461574 DHX32Q7L7V1 743 aaKnown RBP6.29□□□□□ -1.4
BRCA1-206ENST00000461574 PRRT2Q7Z6L0 340 aaPredicted RBP6.29□□□□□ -1.4
BRCA1-206ENST00000461574 WFDC8Q8IUA0 241 aa6.29□□□□□ -1.4
BRCA1-206ENST00000461574 SCYL3Q8IZE3 742 aa6.29□□□□□ -1.4
BRCA1-206ENST00000461574 ANKRD13CQ8N6S4 541 aa6.29□□□□□ -1.4
BRCA1-206ENST00000461574 WDR66Q8TBY9 1149 aa6.29□□□□□ -1.4
BRCA1-206ENST00000461574 IFT43Q96FT9 208 aa6.29□□□□□ -1.4
BRCA1-206ENST00000461574 PUS3Q9BZE2 481 aaKnown RBP6.29□□□□□ -1.4
BRCA1-206ENST00000461574 C11orf49Q9H6J7 331 aa6.29□□□□□ -1.4
BRCA1-206ENST00000461574 MTMR10Q9NXD2 777 aa6.29□□□□□ -1.4
BRCA1-206ENST00000461574 FRRS1LQ9P0K9 344 aa6.29□□□□□ -1.4
BRCA1-206ENST00000461574 LRRFIP2Q9Y608 721 aaKnown RBP6.29□□□□□ -1.4
BRCA1-206ENST00000461574 PHIPQ8WWQ0 1821 aa6.29□□□□□ -1.4
BRCA1-206ENST00000461574 LOC285556D6RIA3 1793 aa6.29□□□□□ -1.4
BRCA1-206ENST00000461574 FRMPD3Q5JV73 1810 aa6.28□□□□□ -1.4
BRCA1-206ENST00000461574 TRIM75PA6NK02 468 aa6.28□□□□□ -1.4
BRCA1-206ENST00000461574 SASH3O75995 380 aa6.28□□□□□ -1.4
BRCA1-206ENST00000461574 PDE8BO95263 885 aa6.28□□□□□ -1.4
BRCA1-206ENST00000461574 EPB42P16452 691 aa6.28□□□□□ -1.4
BRCA1-206ENST00000461574 IGFBP4P22692 258 aa6.28□□□□□ -1.4
BRCA1-206ENST00000461574 PTK7Q13308 1070 aa6.28□□□□□ -1.4
BRCA1-206ENST00000461574 MOGSQ13724 837 aa6.28□□□□□ -1.4
BRCA1-206ENST00000461574 PUM3Q15397 648 aaKnown RBP6.28□□□□□ -1.4
BRCA1-206ENST00000461574 FAM110CQ1W6H9 321 aa6.28□□□□□ -1.4
BRCA1-206ENST00000461574 LCE3BQ5TA77 95 aa6.28□□□□□ -1.4
BRCA1-206ENST00000461574 CDC42EP5Q6NZY7 148 aa6.28□□□□□ -1.4
BRCA1-206ENST00000461574 ELMSAN1Q6PJG2 1045 aa6.28□□□□□ -1.4
BRCA1-206ENST00000461574 FBXO33Q7Z6M2 555 aa6.28□□□□□ -1.4
BRCA1-206ENST00000461574 GLMNQ92990 594 aa6.28□□□□□ -1.4
BRCA1-206ENST00000461574 MEGF10Q96KG7 1140 aa6.28□□□□□ -1.4
BRCA1-206ENST00000461574 FAM161BQ96MY7 647 aa6.28□□□□□ -1.4
BRCA1-206ENST00000461574 MRIQ9BWK5 157 aa6.28□□□□□ -1.4
BRCA1-206ENST00000461574 USP40Q9NVE5 1235 aa6.28□□□□□ -1.4
BRCA1-206ENST00000461574 ZNF112Q9UJU3 913 aa6.28□□□□□ -1.4
BRCA1-206ENST00000461574 SLC45A1Q9Y2W3 748 aa6.28□□□□□ -1.4
BRCA1-206ENST00000461574 FANCIQ9NVI1 1328 aa6.27□□□□□ -1.41
BRCA1-206ENST00000461574 MAST2Q6P0Q8 1798 aa6.27□□□□□ -1.41
BRCA1-206ENST00000461574 DEAF1O75398 565 aaPredicted RBP6.27□□□□□ -1.41
BRCA1-206ENST00000461574 ALDH1L1O75891 902 aa6.27□□□□□ -1.41
BRCA1-206ENST00000461574 LDHBP07195 334 aaKnown RBP6.27□□□□□ -1.41
BRCA1-206ENST00000461574 RARAP10276 462 aa6.27□□□□□ -1.41
BRCA1-206ENST00000461574 SLC5A1P13866 664 aa6.27□□□□□ -1.41
BRCA1-206ENST00000461574 PTPRAP18433 802 aa6.27□□□□□ -1.41
BRCA1-206ENST00000461574 NFIAQ12857 509 aa6.27□□□□□ -1.41
BRCA1-206ENST00000461574 PABPC4Q13310 644 aaKnown RBP eCLIP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms