RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 UPF3AQ9H1J1 476 aaKnown RBP17.9■□□□□ 0.46
VARS-219ENST00000461328 VTA1Q9NP79 307 aa17.9■□□□□ 0.46
VARS-219ENST00000461328 LRRC37A2A6NM11 1700 aa17.89■□□□□ 0.46
VARS-219ENST00000461328 LOC102724159A0A0B4J2E5 919 aa17.89■□□□□ 0.45
VARS-219ENST00000461328 CCDC69A6NI79 296 aa17.89■□□□□ 0.45
VARS-219ENST00000461328 IRX5P78411 483 aaPredicted RBP17.89■□□□□ 0.45
VARS-219ENST00000461328 TLE2Q04725 743 aa17.89■□□□□ 0.45
VARS-219ENST00000461328 PWP2Q15269 919 aaKnown RBP17.89■□□□□ 0.45
VARS-219ENST00000461328 QRICH1Q2TAL8 776 aa17.89■□□□□ 0.45
VARS-219ENST00000461328 IGDCC4Q8TDY8 1250 aa17.89■□□□□ 0.45
VARS-219ENST00000461328 MORC4Q8TE76 937 aa17.89■□□□□ 0.45
VARS-219ENST00000461328 TMEM87BQ96K49 555 aa17.89■□□□□ 0.45
VARS-219ENST00000461328 GLT1D1Q96MS3 346 aa17.89■□□□□ 0.45
VARS-219ENST00000461328 MPHOSPH6Q99547 160 aaKnown RBP17.89■□□□□ 0.45
VARS-219ENST00000461328 JMJD4Q9H9V9 463 aa17.89■□□□□ 0.45
VARS-219ENST00000461328 LY9Q9HBG7 655 aa17.89■□□□□ 0.45
VARS-219ENST00000461328 PDGFCQ9NRA1 345 aa17.89■□□□□ 0.45
VARS-219ENST00000461328 MAD2L2Q9UI95 211 aa17.89■□□□□ 0.45
VARS-219ENST00000461328 ABCB11O95342 1321 aa17.89■□□□□ 0.45
VARS-219ENST00000461328 LCTP09848 1927 aa17.88■□□□□ 0.45
VARS-219ENST00000461328 RANBP2P49792 3224 aaKnown RBP17.88■□□□□ 0.45
VARS-219ENST00000461328 SH2B2O14492 632 aaPredicted RBP17.88■□□□□ 0.45
VARS-219ENST00000461328 PQBP1O60828 265 aaKnown RBP17.88■□□□□ 0.45
VARS-219ENST00000461328 REC8O95072 547 aa17.88■□□□□ 0.45
VARS-219ENST00000461328 ASGR1P07306 291 aa17.88■□□□□ 0.45
VARS-219ENST00000461328 KRT32Q14532 448 aa17.88■□□□□ 0.45
VARS-219ENST00000461328 IQSEC1Q6DN90 963 aa17.88■□□□□ 0.45
VARS-219ENST00000461328 CCSAPQ6IQ19 270 aaPredicted RBP17.88■□□□□ 0.45
VARS-219ENST00000461328 TAPT1Q6NXT6 567 aa17.88■□□□□ 0.45
VARS-219ENST00000461328 TLK2Q86UE8 772 aa17.88■□□□□ 0.45
VARS-219ENST00000461328 FBXO11Q86XK2 927 aa17.88■□□□□ 0.45
VARS-219ENST00000461328 HOMER1Q86YM7 354 aa17.88■□□□□ 0.45
VARS-219ENST00000461328 TDHQ8IZJ6 230 aa17.88■□□□□ 0.45
VARS-219ENST00000461328 ZNF654Q8IZM8 581 aa17.88■□□□□ 0.45
VARS-219ENST00000461328 CTCFLQ8NI51 663 aaPredicted RBP17.88■□□□□ 0.45
VARS-219ENST00000461328 VTI1AQ96AJ9 217 aa17.88■□□□□ 0.45
VARS-219ENST00000461328 MTA3Q9BTC8 594 aa17.88■□□□□ 0.45
VARS-219ENST00000461328 MYL10Q9BUA6 226 aa17.88■□□□□ 0.45
VARS-219ENST00000461328 AP5M1Q9H0R1 490 aa17.88■□□□□ 0.45
VARS-219ENST00000461328 GPHNQ9NQX3 736 aaPredicted RBP17.88■□□□□ 0.45
VARS-219ENST00000461328 PDLIM7Q9NR12 457 aa17.88■□□□□ 0.45
VARS-219ENST00000461328 PALM3A6NDB9 673 aaPredicted RBP17.87■□□□□ 0.45
VARS-219ENST00000461328 DDAH1O94760 285 aa17.87■□□□□ 0.45
VARS-219ENST00000461328 SMPD1P17405 629 aa17.87■□□□□ 0.45
VARS-219ENST00000461328 KIF5BP33176 963 aa17.87■□□□□ 0.45
VARS-219ENST00000461328 BEX3Q00994 111 aa17.87■□□□□ 0.45
VARS-219ENST00000461328 PDE4DQ08499 809 aa17.87■□□□□ 0.45
VARS-219ENST00000461328 RGS22Q8NE09 1264 aa17.87■□□□□ 0.45
VARS-219ENST00000461328 DNERQ8NFT8 737 aa17.87■□□□□ 0.45
VARS-219ENST00000461328 NEK1Q96PY6 1258 aa17.87■□□□□ 0.45
VARS-219ENST00000461328 LRRC2Q9BYS8 371 aa17.87■□□□□ 0.45
VARS-219ENST00000461328 GNEQ9Y223 722 aaKnown RBP17.87■□□□□ 0.45
VARS-219ENST00000461328 B4DLN1 442 aa17.86■□□□□ 0.45
VARS-219ENST00000461328 DYNC1LI2O43237 492 aaPredicted RBP17.86■□□□□ 0.45
VARS-219ENST00000461328 CLTBP09497 229 aa17.86■□□□□ 0.45
VARS-219ENST00000461328 MRPL12P52815 198 aaKnown RBP17.86■□□□□ 0.45
VARS-219ENST00000461328 NKX3-2P78367 333 aa17.86■□□□□ 0.45
VARS-219ENST00000461328 TROAPQ12815 778 aa17.86■□□□□ 0.45
VARS-219ENST00000461328 SH3RF1Q7Z6J0 888 aa17.86■□□□□ 0.45
VARS-219ENST00000461328 MCF2L2Q86YR7 1114 aa17.86■□□□□ 0.45
VARS-219ENST00000461328 TMTC2Q8N394 836 aa17.86■□□□□ 0.45
VARS-219ENST00000461328 AMNQ9BXJ7 453 aa17.86■□□□□ 0.45
VARS-219ENST00000461328 MRPL11Q9Y3B7 192 aaKnown RBP17.86■□□□□ 0.45
VARS-219ENST00000461328 ELP1O95163 1332 aa17.86■□□□□ 0.45
VARS-219ENST00000461328 ZBTB5O15062 677 aa17.85■□□□□ 0.45
VARS-219ENST00000461328 CTAGE5O15320 804 aa17.85■□□□□ 0.45
VARS-219ENST00000461328 FSCN1Q16658 493 aaKnown RBP17.85■□□□□ 0.45
VARS-219ENST00000461328 PIBF1Q8WXW3 757 aa17.85■□□□□ 0.45
VARS-219ENST00000461328 MAF1Q9H063 256 aa17.85■□□□□ 0.45
VARS-219ENST00000461328 Q9Y3F1 56 aa17.85■□□□□ 0.45
VARS-219ENST00000461328 SLC12A7Q9Y666 1083 aa17.85■□□□□ 0.45
VARS-219ENST00000461328 A0A0U1RQG5 324 aaPredicted RBP17.84■□□□□ 0.45
VARS-219ENST00000461328 TRIM43BA6NCK2 446 aa17.84■□□□□ 0.45
VARS-219ENST00000461328 DCDC2CA8MYV0 355 aa17.84■□□□□ 0.45
VARS-219ENST00000461328 SOX1O00570 391 aaPredicted RBP17.84■□□□□ 0.45
VARS-219ENST00000461328 ZEB2O60315 1214 aa17.84■□□□□ 0.45
VARS-219ENST00000461328 CALM1P0DP23 149 aa17.84■□□□□ 0.45
VARS-219ENST00000461328 CALM2P0DP24 149 aa17.84■□□□□ 0.45
VARS-219ENST00000461328 CALM3P0DP25 149 aa17.84■□□□□ 0.45
VARS-219ENST00000461328 PTGS1P23219 599 aa17.84■□□□□ 0.45
VARS-219ENST00000461328 EDNRBP24530 442 aa17.84■□□□□ 0.45
VARS-219ENST00000461328 FGD1P98174 961 aa17.84■□□□□ 0.45
VARS-219ENST00000461328 COL9A3Q14050 684 aaPredicted RBP17.84■□□□□ 0.45
VARS-219ENST00000461328 DUSP28Q4G0W2 176 aa17.84■□□□□ 0.45
VARS-219ENST00000461328 TMEM63BQ5T3F8 832 aa17.84■□□□□ 0.45
VARS-219ENST00000461328 SYNE3Q6ZMZ3 975 aa17.84■□□□□ 0.45
VARS-219ENST00000461328 ANKRD33Q7Z3H0 272 aa17.84■□□□□ 0.45
VARS-219ENST00000461328 RAB11FIP4Q86YS3 637 aa17.84■□□□□ 0.45
VARS-219ENST00000461328 RASEFQ8IZ41 740 aa17.84■□□□□ 0.45
VARS-219ENST00000461328 TBC1D5Q92609 795 aa17.84■□□□□ 0.45
VARS-219ENST00000461328 BADQ92934 168 aa17.84■□□□□ 0.45
VARS-219ENST00000461328 TRIM43Q96BQ3 446 aaPredicted RBP17.84■□□□□ 0.45
VARS-219ENST00000461328 TCEANC2Q96MN5 208 aa17.84■□□□□ 0.45
VARS-219ENST00000461328 PIGSQ96S52 555 aa17.84■□□□□ 0.45
VARS-219ENST00000461328 WDR11Q9BZH6 1224 aa17.84■□□□□ 0.45
VARS-219ENST00000461328 TMEM39AQ9NV64 488 aa17.84■□□□□ 0.45
VARS-219ENST00000461328 PCDHA1Q9Y5I3 950 aa17.84■□□□□ 0.45
VARS-219ENST00000461328 LTBP2Q14767 1821 aa17.84■□□□□ 0.45
VARS-219ENST00000461328 MROH7Q68CQ1 1323 aa17.83■□□□□ 0.44
VARS-219ENST00000461328 RXRAP19793 462 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms