RNA–Protein interactions for RNA: ENST00000460509.1

VBP1-202, Transcript of VHL binding protein 1, humanhuman

TSL 2

Gene VBP1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-202ENST00000460509 KISS1RQ969F8 398 aaPredicted RBP6.91□□□□□ -1.3
VBP1-202ENST00000460509 C1orf159Q96HA4 380 aa6.91□□□□□ -1.3
VBP1-202ENST00000460509 NDOR1Q9UHB4 597 aa6.91□□□□□ -1.3
VBP1-202ENST00000460509 TRAF6Q9Y4K3 522 aa6.91□□□□□ -1.3
VBP1-202ENST00000460509 RAPGEF3O95398 923 aa6.9□□□□□ -1.3
VBP1-202ENST00000460509 LCP1P13796 627 aa6.9□□□□□ -1.3
VBP1-202ENST00000460509 LTBRP36941 435 aa6.9□□□□□ -1.3
VBP1-202ENST00000460509 GDNFP39905 211 aa6.9□□□□□ -1.3
VBP1-202ENST00000460509 KIR2DL1P43626 348 aaPredicted RBP6.9□□□□□ -1.3
VBP1-202ENST00000460509 KIR2DL2P43627 348 aaPredicted RBP6.9□□□□□ -1.3
VBP1-202ENST00000460509 CHRNEQ04844 493 aa6.9□□□□□ -1.3
VBP1-202ENST00000460509 CBX2Q14781 532 aaPredicted RBP6.9□□□□□ -1.3
VBP1-202ENST00000460509 TCEA2Q15560 299 aa6.9□□□□□ -1.3
VBP1-202ENST00000460509 NTRK3Q16288 839 aa6.9□□□□□ -1.3
VBP1-202ENST00000460509 INF2Q27J81 1249 aa6.9□□□□□ -1.3
VBP1-202ENST00000460509 E4F1Q66K89 784 aaPredicted RBP6.9□□□□□ -1.3
VBP1-202ENST00000460509 IQCEQ6IPM2 695 aa6.9□□□□□ -1.3
VBP1-202ENST00000460509 C16orf86Q6ZW13 317 aa6.9□□□□□ -1.3
VBP1-202ENST00000460509 CCDC103Q8IW40 242 aa6.9□□□□□ -1.3
VBP1-202ENST00000460509 SIRT2Q8IXJ6 389 aa6.9□□□□□ -1.3
VBP1-202ENST00000460509 MYLIPQ8WY64 445 aa6.9□□□□□ -1.3
VBP1-202ENST00000460509 JMJD8Q96S16 334 aa6.9□□□□□ -1.3
VBP1-202ENST00000460509 PHF20Q9BVI0 1012 aa6.9□□□□□ -1.3
VBP1-202ENST00000460509 TAF6LQ9Y6J9 622 aa6.9□□□□□ -1.3
VBP1-202ENST00000460509 A0A1W2PQJ5 194 aa6.89□□□□□ -1.31
VBP1-202ENST00000460509 FITM1A5D6W6 292 aa6.89□□□□□ -1.31
VBP1-202ENST00000460509 ENPP3O14638 875 aa6.89□□□□□ -1.31
VBP1-202ENST00000460509 MYO1BO43795 1136 aa6.89□□□□□ -1.31
VBP1-202ENST00000460509 NPHS1O60500 1241 aa6.89□□□□□ -1.31
VBP1-202ENST00000460509 HSD3B2P26439 372 aa6.89□□□□□ -1.31
VBP1-202ENST00000460509 GALK1P51570 392 aa6.89□□□□□ -1.31
VBP1-202ENST00000460509 KCNAB2Q13303 367 aa6.89□□□□□ -1.31
VBP1-202ENST00000460509 ACBD5Q5T8D3 534 aaPredicted RBP6.89□□□□□ -1.31
VBP1-202ENST00000460509 MBLAC2Q68D91 279 aa6.89□□□□□ -1.31
VBP1-202ENST00000460509 USP33Q8TEY7 942 aa6.89□□□□□ -1.31
VBP1-202ENST00000460509 DCAF4Q8WV16 495 aa6.89□□□□□ -1.31
VBP1-202ENST00000460509 MMP19Q99542 508 aa6.89□□□□□ -1.31
VBP1-202ENST00000460509 NCOA5Q9HCD5 579 aaKnown RBP6.89□□□□□ -1.31
VBP1-202ENST00000460509 C19orf73Q9NVV2 129 aa6.89□□□□□ -1.31
VBP1-202ENST00000460509 GULP1Q9UBP9 304 aa6.89□□□□□ -1.31
VBP1-202ENST00000460509 GPR160Q9UJ42 338 aa6.89□□□□□ -1.31
VBP1-202ENST00000460509 CTNND2Q9UQB3 1225 aa6.89□□□□□ -1.31
VBP1-202ENST00000460509 PCDHA2Q9Y5H9 948 aa6.89□□□□□ -1.31
VBP1-202ENST00000460509 CD2APQ9Y5K6 639 aa6.89□□□□□ -1.31
VBP1-202ENST00000460509 OAS3Q9Y6K5 1087 aaKnown RBP6.89□□□□□ -1.31
VBP1-202ENST00000460509 A0A1W2PQ45 241 aaPredicted RBP6.88□□□□□ -1.31
VBP1-202ENST00000460509 A0A1W2PQY0 241 aa6.88□□□□□ -1.31
VBP1-202ENST00000460509 C7orf72A4D263 438 aa6.88□□□□□ -1.31
VBP1-202ENST00000460509 WTIPA6NIX2 430 aaPredicted RBP6.88□□□□□ -1.31
VBP1-202ENST00000460509 ARNTLO00327 626 aa6.88□□□□□ -1.31
VBP1-202ENST00000460509 PSPNO60542 156 aa6.88□□□□□ -1.31
VBP1-202ENST00000460509 APPP05067 770 aa6.88□□□□□ -1.31
VBP1-202ENST00000460509 PRKCAP17252 672 aa6.88□□□□□ -1.31
VBP1-202ENST00000460509 GABREP78334 506 aa6.88□□□□□ -1.31
VBP1-202ENST00000460509 KIR3DS1Q14943 382 aa6.88□□□□□ -1.31
VBP1-202ENST00000460509 TKFCQ3LXA3 575 aa6.88□□□□□ -1.31
VBP1-202ENST00000460509 HSF5Q4G112 596 aaPredicted RBP6.88□□□□□ -1.31
VBP1-202ENST00000460509 GALNT18Q6P9A2 607 aa6.88□□□□□ -1.31
VBP1-202ENST00000460509 SLCO6A1Q86UG4 719 aa6.88□□□□□ -1.31
VBP1-202ENST00000460509 RCBTB1Q8NDN9 531 aa6.88□□□□□ -1.31
VBP1-202ENST00000460509 NUP43Q8NFH3 380 aa6.88□□□□□ -1.31
VBP1-202ENST00000460509 PTPRN2Q92932 1015 aa6.88□□□□□ -1.31
VBP1-202ENST00000460509 SLKQ9H2G2 1235 aaPredicted RBP6.88□□□□□ -1.31
VBP1-202ENST00000460509 IMPACTQ9P2X3 320 aa6.88□□□□□ -1.31
VBP1-202ENST00000460509 RWDD3Q9Y3V2 267 aa6.88□□□□□ -1.31
VBP1-202ENST00000460509 HPXP02790 462 aa6.87□□□□□ -1.31
VBP1-202ENST00000460509 C6orf222P0C671 652 aaPredicted RBP6.87□□□□□ -1.31
VBP1-202ENST00000460509 TACR1P25103 407 aa6.87□□□□□ -1.31
VBP1-202ENST00000460509 MTDHQ86UE4 582 aaKnown RBP6.87□□□□□ -1.31
VBP1-202ENST00000460509 ABHD4Q8TB40 342 aa6.87□□□□□ -1.31
VBP1-202ENST00000460509 SFMBT1Q9UHJ3 866 aa6.87□□□□□ -1.31
VBP1-202ENST00000460509 TIMM13Q9Y5L4 95 aaPredicted RBP6.87□□□□□ -1.31
VBP1-202ENST00000460509 ASXL2Q76L83 1435 aa6.86□□□□□ -1.31
VBP1-202ENST00000460509 PLD2O14939 933 aa6.86□□□□□ -1.31
VBP1-202ENST00000460509 NRDCO43847 1150 aa6.86□□□□□ -1.31
VBP1-202ENST00000460509 MSCO60682 206 aa6.86□□□□□ -1.31
VBP1-202ENST00000460509 FUCA1P04066 466 aa6.86□□□□□ -1.31
VBP1-202ENST00000460509 BCL6P41182 706 aa6.86□□□□□ -1.31
VBP1-202ENST00000460509 AFMP43652 599 aa6.86□□□□□ -1.31
VBP1-202ENST00000460509 CEBPAP49715 358 aaPredicted RBP6.86□□□□□ -1.31
VBP1-202ENST00000460509 RPL11P62913 178 aaKnown RBP6.86□□□□□ -1.31
VBP1-202ENST00000460509 GUCY1A3Q02108 690 aa6.86□□□□□ -1.31
VBP1-202ENST00000460509 TIGD5Q53EQ6 642 aa6.86□□□□□ -1.31
VBP1-202ENST00000460509 STYK1Q6J9G0 422 aa6.86□□□□□ -1.31
VBP1-202ENST00000460509 MAMDC2Q7Z304 686 aaPredicted RBP6.86□□□□□ -1.31
VBP1-202ENST00000460509 IFNL3Q8IZI9 196 aa6.86□□□□□ -1.31
VBP1-202ENST00000460509 FAM177A1Q8N128 213 aaPredicted RBP6.86□□□□□ -1.31
VBP1-202ENST00000460509 SYNPOQ8N3V7 929 aa6.86□□□□□ -1.31
VBP1-202ENST00000460509 SLC7A14Q8TBB6 771 aa6.86□□□□□ -1.31
VBP1-202ENST00000460509 PLCD4Q9BRC7 762 aa6.86□□□□□ -1.31
VBP1-202ENST00000460509 MRPL4Q9BYD3 311 aaKnown RBP6.86□□□□□ -1.31
VBP1-202ENST00000460509 SLC52A2Q9HAB3 445 aa6.86□□□□□ -1.31
VBP1-202ENST00000460509 GPR27Q9NS67 375 aa6.86□□□□□ -1.31
VBP1-202ENST00000460509 MARCH2Q9P0N8 246 aa6.86□□□□□ -1.31
VBP1-202ENST00000460509 PCDHA9Q9Y5H5 950 aa6.86□□□□□ -1.31
VBP1-202ENST00000460509 CADPSQ9ULU8 1353 aa6.85□□□□□ -1.31
VBP1-202ENST00000460509 AQP7O14520 342 aa6.85□□□□□ -1.31
VBP1-202ENST00000460509 EFCAB14O75071 495 aa6.85□□□□□ -1.31
VBP1-202ENST00000460509 CYP4F8P98187 520 aa6.85□□□□□ -1.31
VBP1-202ENST00000460509 PABPC4Q13310 644 aaKnown RBP eCLIP6.85□□□□□ -1.314e-8■□□□□ 9.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms