RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 VEZTQ9HBM0 779 aa17.17■□□□□ 0.34
LMNB1-203ENST00000460265 PPP1R3GB7ZBB8 358 aa17.17■□□□□ 0.34
LMNB1-203ENST00000460265 USP17L15C9J2P7 530 aa17.17■□□□□ 0.34
LMNB1-203ENST00000460265 USP17L13C9JLJ4 530 aa17.17■□□□□ 0.34
LMNB1-203ENST00000460265 USP17L11C9JVI0 530 aa17.17■□□□□ 0.34
LMNB1-203ENST00000460265 USP17L18D6R9N7 530 aa17.17■□□□□ 0.34
LMNB1-203ENST00000460265 USP17L22D6RA61 530 aa17.17■□□□□ 0.34
LMNB1-203ENST00000460265 USP17L17D6RBQ6 530 aa17.17■□□□□ 0.34
LMNB1-203ENST00000460265 USP17L19D6RCP7 530 aa17.17■□□□□ 0.34
LMNB1-203ENST00000460265 USP17L20D6RJB6 530 aa17.17■□□□□ 0.34
LMNB1-203ENST00000460265 MRPL12P52815 198 aaKnown RBP17.17■□□□□ 0.34
LMNB1-203ENST00000460265 ARID5AQ03989 594 aa17.17■□□□□ 0.34
LMNB1-203ENST00000460265 USP17L24Q0WX57 530 aa17.17■□□□□ 0.34
LMNB1-203ENST00000460265 NFIAQ12857 509 aa17.17■□□□□ 0.34
LMNB1-203ENST00000460265 MCTP2Q6DN12 878 aa17.17■□□□□ 0.34
LMNB1-203ENST00000460265 USP17L6PQ6QN14 398 aa17.17■□□□□ 0.34
LMNB1-203ENST00000460265 PLEKHA4Q9H4M7 779 aa17.17■□□□□ 0.34
LMNB1-203ENST00000460265 PDE11AQ9HCR9 933 aa17.17■□□□□ 0.34
LMNB1-203ENST00000460265 GOLGA6L9A6NEM1 432 aa17.16■□□□□ 0.34
LMNB1-203ENST00000460265 FCER1AP12319 257 aa17.16■□□□□ 0.34
LMNB1-203ENST00000460265 PPP4CP60510 307 aa17.16■□□□□ 0.34
LMNB1-203ENST00000460265 NPY5RQ15761 445 aa17.16■□□□□ 0.34
LMNB1-203ENST00000460265 ARL6IP4Q66PJ3 421 aaKnown RBP17.16■□□□□ 0.34
LMNB1-203ENST00000460265 C2CD5Q86YS7 1000 aa17.16■□□□□ 0.34
LMNB1-203ENST00000460265 NELFCDQ8IXH7 590 aa17.16■□□□□ 0.34
LMNB1-203ENST00000460265 PARD6BQ9BYG5 372 aa17.16■□□□□ 0.34
LMNB1-203ENST00000460265 PSTPIP2Q9H939 334 aa17.16■□□□□ 0.34
LMNB1-203ENST00000460265 USP17L10C9JJH3 530 aa17.16■□□□□ 0.34
LMNB1-203ENST00000460265 FXR1P51114 621 aaKnown RBP eCLIP17.16■□□□□ 0.34
LMNB1-203ENST00000460265 CCDC102AQ96A19 550 aa17.16■□□□□ 0.34
LMNB1-203ENST00000460265 MYH7P12883 1935 aa17.16■□□□□ 0.34
LMNB1-203ENST00000460265 TTLL1O95922 423 aa17.16■□□□□ 0.34
LMNB1-203ENST00000460265 ALDH1B1P30837 517 aa17.16■□□□□ 0.34
LMNB1-203ENST00000460265 NR1I3Q14994 352 aa17.16■□□□□ 0.34
LMNB1-203ENST00000460265 CACNA2D4Q7Z3S7 1137 aa17.16■□□□□ 0.34
LMNB1-203ENST00000460265 FAM207AQ9NSI2 230 aaPredicted RBP17.16■□□□□ 0.34
LMNB1-203ENST00000460265 FAM237AA0A1B0GTK4 181 aa17.15■□□□□ 0.34
LMNB1-203ENST00000460265 H3BQF6 201 aa17.15■□□□□ 0.34
LMNB1-203ENST00000460265 RHOXF2BP0C7M4 288 aa17.15■□□□□ 0.34
LMNB1-203ENST00000460265 ADRA2BP18089 450 aa17.15■□□□□ 0.34
LMNB1-203ENST00000460265 PPP2R3AQ06190 1150 aa17.15■□□□□ 0.34
LMNB1-203ENST00000460265 LONRF2Q1L5Z9 754 aa17.15■□□□□ 0.34
LMNB1-203ENST00000460265 CERKLQ49MI3 558 aaPredicted RBP17.15■□□□□ 0.34
LMNB1-203ENST00000460265 CCDC40Q4G0X9 1142 aa17.15■□□□□ 0.34
LMNB1-203ENST00000460265 RHOXF2Q9BQY4 288 aa17.15■□□□□ 0.34
LMNB1-203ENST00000460265 PCDHA1Q9Y5I3 950 aa17.15■□□□□ 0.34
LMNB1-203ENST00000460265 PCDHAC2Q9Y5I4 1007 aa17.15■□□□□ 0.34
LMNB1-203ENST00000460265 H0YIN7 160 aa17.15■□□□□ 0.34
LMNB1-203ENST00000460265 MMS22LQ6ZRQ5 1243 aa17.15■□□□□ 0.34
LMNB1-203ENST00000460265 C16orf86Q6ZW13 317 aa17.15■□□□□ 0.34
LMNB1-203ENST00000460265 FAM212AQ96EL1 285 aa17.15■□□□□ 0.34
LMNB1-203ENST00000460265 CAPZA3Q96KX2 299 aa17.15■□□□□ 0.34
LMNB1-203ENST00000460265 MED15Q96RN5 788 aa17.15■□□□□ 0.34
LMNB1-203ENST00000460265 EP400Q96L91 3159 aa17.15■□□□□ 0.34
LMNB1-203ENST00000460265 PALM3A6NDB9 673 aaPredicted RBP17.15■□□□□ 0.34
LMNB1-203ENST00000460265 TCP11X2Q5H9J9 407 aa17.15■□□□□ 0.34
LMNB1-203ENST00000460265 HINFPQ9BQA5 517 aa17.15■□□□□ 0.34
LMNB1-203ENST00000460265 FUT8Q9BYC5 575 aa17.15■□□□□ 0.34
LMNB1-203ENST00000460265 COA1Q9GZY4 146 aa17.15■□□□□ 0.34
LMNB1-203ENST00000460265 MTMR4Q9NYA4 1195 aa17.15■□□□□ 0.34
LMNB1-203ENST00000460265 SUFUQ9UMX1 484 aa17.15■□□□□ 0.34
LMNB1-203ENST00000460265 CLRN2A0PK11 232 aa17.14■□□□□ 0.33
LMNB1-203ENST00000460265 MYO1BO43795 1136 aa17.14■□□□□ 0.33
LMNB1-203ENST00000460265 CHRNA5P30532 468 aa17.14■□□□□ 0.33
LMNB1-203ENST00000460265 TDRD12Q587J7 1177 aaKnown RBP17.14■□□□□ 0.33
LMNB1-203ENST00000460265 UBXN6Q9BZV1 441 aa17.14■□□□□ 0.33
LMNB1-203ENST00000460265 DDX4Q9NQI0 724 aaKnown RBP17.14■□□□□ 0.33
LMNB1-203ENST00000460265 TMOD2Q9NZR1 351 aa17.14■□□□□ 0.33
LMNB1-203ENST00000460265 PCDHA12Q9UN75 941 aa17.14■□□□□ 0.33
LMNB1-203ENST00000460265 H7C1D1 291 aa17.14■□□□□ 0.33
LMNB1-203ENST00000460265 ADD3Q9UEY8 706 aaKnown RBP17.14■□□□□ 0.33
LMNB1-203ENST00000460265 RWDD2AQ9UIY3 292 aa17.14■□□□□ 0.33
LMNB1-203ENST00000460265 BCL9LQ86UU0 1499 aa17.14■□□□□ 0.33
LMNB1-203ENST00000460265 TCP10L2B9ZVM9 353 aa17.13■□□□□ 0.33
LMNB1-203ENST00000460265 TRAF5O00463 557 aa17.13■□□□□ 0.33
LMNB1-203ENST00000460265 EIF3JO75822 258 aaKnown RBP17.13■□□□□ 0.33
LMNB1-203ENST00000460265 FGRP09769 529 aa17.13■□□□□ 0.33
LMNB1-203ENST00000460265 PDHBP11177 359 aa17.13■□□□□ 0.33
LMNB1-203ENST00000460265 ZNF18P17022 549 aa17.13■□□□□ 0.33
LMNB1-203ENST00000460265 RBM26Q5T8P6 1007 aaKnown RBP17.13■□□□□ 0.33
LMNB1-203ENST00000460265 TUBGCP2Q9BSJ2 902 aa17.13■□□□□ 0.33
LMNB1-203ENST00000460265 TDRD3Q9H7E2 651 aaKnown RBP17.13■□□□□ 0.33
LMNB1-203ENST00000460265 SH3GLB2Q9NR46 395 aa17.13■□□□□ 0.33
LMNB1-203ENST00000460265 A0A1B0GTH6 734 aa17.13■□□□□ 0.33
LMNB1-203ENST00000460265 MACROD2A1Z1Q3 448 aa17.13■□□□□ 0.33
LMNB1-203ENST00000460265 CLSTN1O94985 981 aa17.13■□□□□ 0.33
LMNB1-203ENST00000460265 GALNT17Q6IS24 598 aa17.13■□□□□ 0.33
LMNB1-203ENST00000460265 ADGRF4Q8IZF3 695 aa17.13■□□□□ 0.33
LMNB1-203ENST00000460265 MKRN1Q9UHC7 482 aaKnown RBP17.13■□□□□ 0.33
LMNB1-203ENST00000460265 SCAF8Q9UPN6 1271 aaKnown RBP17.13■□□□□ 0.33
LMNB1-203ENST00000460265 PHLPP2Q6ZVD8 1323 aa17.13■□□□□ 0.33
LMNB1-203ENST00000460265 MYH13Q9UKX3 1938 aa17.13■□□□□ 0.33
LMNB1-203ENST00000460265 A0A0U1RQJ8 604 aa17.13■□□□□ 0.33
LMNB1-203ENST00000460265 PDE6BP35913 854 aa17.13■□□□□ 0.33
LMNB1-203ENST00000460265 STK4Q13043 487 aa17.13■□□□□ 0.33
LMNB1-203ENST00000460265 SLFN13Q68D06 897 aa17.13■□□□□ 0.33
LMNB1-203ENST00000460265 RAD9BQ6WBX8 426 aa17.13■□□□□ 0.33
LMNB1-203ENST00000460265 ATRIPQ8WXE1 791 aa17.13■□□□□ 0.33
LMNB1-203ENST00000460265 CUL5Q93034 780 aa17.13■□□□□ 0.33
LMNB1-203ENST00000460265 MTRQ99707 1265 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms