RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 ATP5HO75947 161 aa10.73□□□□□ -0.69
UFD1-205ENST00000459854 GNA11P29992 359 aa10.73□□□□□ -0.69
UFD1-205ENST00000459854 CERS3Q8IU89 383 aa10.73□□□□□ -0.69
UFD1-205ENST00000459854 TRIM42Q8IWZ5 723 aa10.73□□□□□ -0.69
UFD1-205ENST00000459854 NME8Q8N427 588 aa10.73□□□□□ -0.69
UFD1-205ENST00000459854 PDCD7Q8N8D1 485 aaKnown RBP10.73□□□□□ -0.69
UFD1-205ENST00000459854 ATP2A3Q93084 1043 aa10.73□□□□□ -0.69
UFD1-205ENST00000459854 JPH2Q9BR39 696 aaPredicted RBP10.73□□□□□ -0.69
UFD1-205ENST00000459854 H7C1D1 291 aa10.72□□□□□ -0.69
UFD1-205ENST00000459854 EPB41P11171 864 aaKnown RBP10.72□□□□□ -0.69
UFD1-205ENST00000459854 TNFAIP3P21580 790 aa10.72□□□□□ -0.69
UFD1-205ENST00000459854 PHBP35232 272 aa10.72□□□□□ -0.69
UFD1-205ENST00000459854 ITIH3Q06033 890 aa10.72□□□□□ -0.69
UFD1-205ENST00000459854 APOBRQ0VD83 1088 aa10.72□□□□□ -0.69
UFD1-205ENST00000459854 IFIT1BQ5T764 474 aaKnown RBP10.72□□□□□ -0.69
UFD1-205ENST00000459854 LIN9Q5TKA1 542 aa10.72□□□□□ -0.69
UFD1-205ENST00000459854 PPP1R21Q6ZMI0 780 aa10.72□□□□□ -0.69
UFD1-205ENST00000459854 ST13P4Q8IZP2 240 aaPredicted RBP10.72□□□□□ -0.69
UFD1-205ENST00000459854 TMEM87BQ96K49 555 aa10.72□□□□□ -0.69
UFD1-205ENST00000459854 XPO4Q9C0E2 1151 aaKnown RBP10.72□□□□□ -0.69
UFD1-205ENST00000459854 PAG1Q9NWQ8 432 aa10.72□□□□□ -0.69
UFD1-205ENST00000459854 NFE2L3Q9Y4A8 694 aa10.72□□□□□ -0.69
UFD1-205ENST00000459854 ABCC12Q96J65 1359 aa10.72□□□□□ -0.69
UFD1-205ENST00000459854 A0A1B0GVL5 298 aa10.72□□□□□ -0.69
UFD1-205ENST00000459854 ZNF202O95125 648 aa10.72□□□□□ -0.69
UFD1-205ENST00000459854 NMIQ13287 307 aaPredicted RBP10.72□□□□□ -0.69
UFD1-205ENST00000459854 DRP2Q13474 957 aa10.72□□□□□ -0.69
UFD1-205ENST00000459854 PDCD2Q16342 344 aaPredicted RBP10.72□□□□□ -0.69
UFD1-205ENST00000459854 HSP90AA4PQ58FG1 418 aa10.72□□□□□ -0.69
UFD1-205ENST00000459854 ADALQ6DHV7 355 aa10.72□□□□□ -0.69
UFD1-205ENST00000459854 SV2BQ7L1I2 683 aa10.72□□□□□ -0.69
UFD1-205ENST00000459854 CTNND2Q9UQB3 1225 aa10.72□□□□□ -0.69
UFD1-205ENST00000459854 TSPY2A6NKD2 308 aa10.72□□□□□ -0.69
UFD1-205ENST00000459854 SPOPO43791 374 aa10.72□□□□□ -0.69
UFD1-205ENST00000459854 MCM7P33993 719 aa10.72□□□□□ -0.69
UFD1-205ENST00000459854 STX17P56962 302 aa10.72□□□□□ -0.69
UFD1-205ENST00000459854 SNX16P57768 344 aa10.72□□□□□ -0.69
UFD1-205ENST00000459854 TAF11Q15544 211 aa10.72□□□□□ -0.69
UFD1-205ENST00000459854 DOK7Q18PE1 504 aa10.72□□□□□ -0.69
UFD1-205ENST00000459854 CCDC82Q8N4S0 544 aa10.72□□□□□ -0.69
UFD1-205ENST00000459854 CRNKL1Q9BZJ0 848 aaKnown RBP10.72□□□□□ -0.69
UFD1-205ENST00000459854 F8W031 263 aaPredicted RBP10.72□□□□□ -0.69
UFD1-205ENST00000459854 PODNQ7Z5L7 613 aa10.72□□□□□ -0.69
UFD1-205ENST00000459854 YY1AP1Q9H869 796 aa10.72□□□□□ -0.69
UFD1-205ENST00000459854 GYG1P46976 350 aa10.71□□□□□ -0.69
UFD1-205ENST00000459854 GTF2IP78347 998 aa10.71□□□□□ -0.69
UFD1-205ENST00000459854 GPSM2P81274 684 aa10.71□□□□□ -0.69
UFD1-205ENST00000459854 CLEC11AQ9Y240 323 aa10.71□□□□□ -0.69
UFD1-205ENST00000459854 FAM13AO94988 1023 aa10.71□□□□□ -0.69
UFD1-205ENST00000459854 MAN1A1P33908 653 aa10.71□□□□□ -0.69
UFD1-205ENST00000459854 SPATA5Q8NB90 893 aa10.71□□□□□ -0.69
UFD1-205ENST00000459854 NLRP7Q8WX94 980 aa10.71□□□□□ -0.69
UFD1-205ENST00000459854 EIF3BP55884 814 aaKnown RBP10.71□□□□□ -0.7
UFD1-205ENST00000459854 IL9RQ01113 521 aa10.71□□□□□ -0.7
UFD1-205ENST00000459854 RBM26Q5T8P6 1007 aaKnown RBP10.71□□□□□ -0.7
UFD1-205ENST00000459854 PPP1R13BQ96KQ4 1090 aa10.71□□□□□ -0.7
UFD1-205ENST00000459854 IFIH1Q9BYX4 1025 aaKnown RBP10.71□□□□□ -0.7
UFD1-205ENST00000459854 KIAA1468Q9P260 1216 aa10.71□□□□□ -0.7
UFD1-205ENST00000459854 MORC2Q9Y6X9 1032 aaPredicted RBP10.71□□□□□ -0.7
UFD1-205ENST00000459854 RNF113AO15541 343 aaKnown RBP10.7□□□□□ -0.7
UFD1-205ENST00000459854 MAP3K7O43318 606 aa10.7□□□□□ -0.7
UFD1-205ENST00000459854 CALUO43852 315 aaPredicted RBP10.7□□□□□ -0.7
UFD1-205ENST00000459854 KRT15P19012 456 aa10.7□□□□□ -0.7
UFD1-205ENST00000459854 CYP7A1P22680 504 aa10.7□□□□□ -0.7
UFD1-205ENST00000459854 CIAPIN1Q6FI81 312 aa10.7□□□□□ -0.7
UFD1-205ENST00000459854 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.7□□□□□ -0.7
UFD1-205ENST00000459854 CCT6BQ92526 530 aa10.7□□□□□ -0.7
UFD1-205ENST00000459854 EPSTI1Q96J88 318 aa10.7□□□□□ -0.7
UFD1-205ENST00000459854 FGFR1OP2Q9NVK5 253 aa10.7□□□□□ -0.7
UFD1-205ENST00000459854 RNF181Q9P0P0 153 aa10.7□□□□□ -0.7
UFD1-205ENST00000459854 DEXIO95424 95 aa10.7□□□□□ -0.7
UFD1-205ENST00000459854 CASP7P55210 303 aa10.7□□□□□ -0.7
UFD1-205ENST00000459854 RAPGEF1Q13905 1077 aa10.7□□□□□ -0.7
UFD1-205ENST00000459854 POSTNQ15063 836 aa10.7□□□□□ -0.7
UFD1-205ENST00000459854 CRACR2BQ8N4Y2 399 aaPredicted RBP10.7□□□□□ -0.7
UFD1-205ENST00000459854 RRP36Q96EU6 259 aaKnown RBP10.7□□□□□ -0.7
UFD1-205ENST00000459854 ZKSCAN3Q9BRR0 538 aa10.7□□□□□ -0.7
UFD1-205ENST00000459854 IFT88Q13099 833 aa10.7□□□□□ -0.7
UFD1-205ENST00000459854 MFSD14BQ5SR56 506 aa10.7□□□□□ -0.7
UFD1-205ENST00000459854 PEX26Q7Z412 305 aa10.7□□□□□ -0.7
UFD1-205ENST00000459854 CSGALNACT2Q8N6G5 542 aa10.7□□□□□ -0.7
UFD1-205ENST00000459854 PPP4R1Q8TF05 950 aa10.7□□□□□ -0.7
UFD1-205ENST00000459854 MIS12Q9H081 205 aa10.7□□□□□ -0.7
UFD1-205ENST00000459854 ASIC3Q9UHC3 531 aa10.7□□□□□ -0.7
UFD1-205ENST00000459854 IKBKBO14920 756 aa10.7□□□□□ -0.7
UFD1-205ENST00000459854 ATP5JP18859 108 aa10.7□□□□□ -0.7
UFD1-205ENST00000459854 CCT6AP40227 531 aaKnown RBP10.7□□□□□ -0.7
UFD1-205ENST00000459854 BCAMP50895 628 aa10.7□□□□□ -0.7
UFD1-205ENST00000459854 SFMBT2Q5VUG0 894 aa10.7□□□□□ -0.7
UFD1-205ENST00000459854 OLFM3Q96PB7 478 aa10.7□□□□□ -0.7
UFD1-205ENST00000459854 MAK16Q9BXY0 300 aaKnown RBP10.7□□□□□ -0.7
UFD1-205ENST00000459854 TOGARAM1Q9Y4F4 1720 aa10.7□□□□□ -0.7
UFD1-205ENST00000459854 BRWD3Q6RI45 1802 aa10.7□□□□□ -0.7
UFD1-205ENST00000459854 TNNI2P48788 182 aa10.69□□□□□ -0.7
UFD1-205ENST00000459854 TBC1D16Q8TBP0 767 aa10.69□□□□□ -0.7
UFD1-205ENST00000459854 EAF2Q96CJ1 260 aaPredicted RBP10.69□□□□□ -0.7
UFD1-205ENST00000459854 AMFRQ9UKV5 643 aa10.69□□□□□ -0.7
UFD1-205ENST00000459854 FRMD4BQ9Y2L6 1034 aa10.69□□□□□ -0.7
UFD1-205ENST00000459854 MYO3BQ8WXR4 1341 aa10.69□□□□□ -0.7
UFD1-205ENST00000459854 TMEM110-MUSTN1A8MSY1 372 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms