RNA–Protein interactions for RNA: ENST00000458578.6

UBE2L3-202, Transcript of ubiquitin conjugating enzyme E2 L3, humanhuman

TSL 2 BASIC

Gene UBE2L3, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2L3-202ENST00000458578 PROCA1Q8NCQ7 364 aaPredicted RBP12.87□□□□□ -0.35
UBE2L3-202ENST00000458578 THAP9Q9H5L6 903 aa12.87□□□□□ -0.35
UBE2L3-202ENST00000458578 YY1AP1Q9H869 796 aa12.87□□□□□ -0.35
UBE2L3-202ENST00000458578 SLC39A2Q9NP94 309 aa12.87□□□□□ -0.35
UBE2L3-202ENST00000458578 GEMIN8Q9NWZ8 242 aaKnown RBP12.87□□□□□ -0.35
UBE2L3-202ENST00000458578 ARHGAP20Q9P2F6 1191 aa12.87□□□□□ -0.35
UBE2L3-202ENST00000458578 SALL4Q9UJQ4 1053 aa12.87□□□□□ -0.35
UBE2L3-202ENST00000458578 PACSIN2Q9UNF0 486 aaPredicted RBP12.87□□□□□ -0.35
UBE2L3-202ENST00000458578 MYH2Q9UKX2 1941 aa12.87□□□□□ -0.35
UBE2L3-202ENST00000458578 UBR2Q8IWV8 1755 aa12.86□□□□□ -0.35
UBE2L3-202ENST00000458578 ARID5AQ03989 594 aa12.86□□□□□ -0.35
UBE2L3-202ENST00000458578 TRADDQ15628 312 aa12.86□□□□□ -0.35
UBE2L3-202ENST00000458578 CCDC152Q4G0S7 254 aa12.86□□□□□ -0.35
UBE2L3-202ENST00000458578 HAUS3Q68CZ6 603 aa12.86□□□□□ -0.35
UBE2L3-202ENST00000458578 LRRC15Q8TF66 581 aa12.86□□□□□ -0.35
UBE2L3-202ENST00000458578 RNPC3Q96LT9 517 aaKnown RBP12.86□□□□□ -0.35
UBE2L3-202ENST00000458578 TANGO6Q9C0B7 1094 aa12.86□□□□□ -0.35
UBE2L3-202ENST00000458578 EPB41L5Q9HCM4 733 aa12.86□□□□□ -0.35
UBE2L3-202ENST00000458578 RBM28Q9NW13 759 aaKnown RBP12.86□□□□□ -0.35
UBE2L3-202ENST00000458578 CYP2D6P10635 497 aa12.86□□□□□ -0.35
UBE2L3-202ENST00000458578 EPHB4P54760 987 aa12.86□□□□□ -0.35
UBE2L3-202ENST00000458578 GFPT1Q06210 699 aaPredicted RBP12.86□□□□□ -0.35
UBE2L3-202ENST00000458578 SF3A3Q12874 501 aaKnown RBP eCLIP12.86□□□□□ -0.35
UBE2L3-202ENST00000458578 CFAP58Q5T655 872 aa12.86□□□□□ -0.35
UBE2L3-202ENST00000458578 MAATS1Q7Z4T9 603 aa12.86□□□□□ -0.35
UBE2L3-202ENST00000458578 CCDC91Q7Z6B0 441 aa12.86□□□□□ -0.35
UBE2L3-202ENST00000458578 CCDC155Q8N6L0 562 aa12.86□□□□□ -0.35
UBE2L3-202ENST00000458578 NID2Q14112 1375 aa12.86□□□□□ -0.35
UBE2L3-202ENST00000458578 STRCP1A6NGW2 1772 aa12.86□□□□□ -0.35
UBE2L3-202ENST00000458578 PNPLA7Q6ZV29 1317 aa12.86□□□□□ -0.35
UBE2L3-202ENST00000458578 BACH1O14867 736 aa12.86□□□□□ -0.35
UBE2L3-202ENST00000458578 KLRC4O43908 158 aa12.86□□□□□ -0.35
UBE2L3-202ENST00000458578 ATP2C2O75185 946 aa12.86□□□□□ -0.35
UBE2L3-202ENST00000458578 SSBP05455 408 aaKnown RBP eCLIP12.86□□□□□ -0.35
UBE2L3-202ENST00000458578 GLI1P08151 1106 aa12.86□□□□□ -0.35
UBE2L3-202ENST00000458578 LONP1P36776 959 aaKnown RBP12.86□□□□□ -0.35
UBE2L3-202ENST00000458578 IL6STP40189 918 aaPredicted RBP12.86□□□□□ -0.35
UBE2L3-202ENST00000458578 MAGEA1P43355 309 aa12.86□□□□□ -0.35
UBE2L3-202ENST00000458578 SUGP1Q8IWZ8 645 aaKnown RBP12.86□□□□□ -0.35
UBE2L3-202ENST00000458578 CCDC170Q8IYT3 715 aa12.86□□□□□ -0.35
UBE2L3-202ENST00000458578 BLIDQ8IZY5 108 aa12.86□□□□□ -0.35
UBE2L3-202ENST00000458578 P2RX5Q93086 422 aa12.86□□□□□ -0.35
UBE2L3-202ENST00000458578 ALS2CR12Q96Q35 445 aa12.86□□□□□ -0.35
UBE2L3-202ENST00000458578 TTYH3Q9C0H2 523 aa12.86□□□□□ -0.35
UBE2L3-202ENST00000458578 SH2D4AQ9H788 454 aa12.86□□□□□ -0.35
UBE2L3-202ENST00000458578 NLRC4Q9NPP4 1024 aa12.86□□□□□ -0.35
UBE2L3-202ENST00000458578 FAM170AA1A519 330 aa12.85□□□□□ -0.35
UBE2L3-202ENST00000458578 TSPY2A6NKD2 308 aa12.85□□□□□ -0.35
UBE2L3-202ENST00000458578 FTCDO95954 541 aa12.85□□□□□ -0.35
UBE2L3-202ENST00000458578 PLCG1P19174 1290 aa12.85□□□□□ -0.35
UBE2L3-202ENST00000458578 MAP2K2P36507 400 aa12.85□□□□□ -0.35
UBE2L3-202ENST00000458578 HEATR3Q7Z4Q2 680 aa12.85□□□□□ -0.35
UBE2L3-202ENST00000458578 FNBP4Q8N3X1 1017 aaPredicted RBP12.85□□□□□ -0.35
UBE2L3-202ENST00000458578 MMGT1Q8N4V1 131 aa12.85□□□□□ -0.35
UBE2L3-202ENST00000458578 CPVLQ9H3G5 476 aa12.85□□□□□ -0.35
UBE2L3-202ENST00000458578 PPANQ9NQ55 473 aaKnown RBP12.85□□□□□ -0.35
UBE2L3-202ENST00000458578 CHD4Q14839 1912 aa12.85□□□□□ -0.35
UBE2L3-202ENST00000458578 ZNF335Q9H4Z2 1342 aaPredicted RBP12.85□□□□□ -0.35
UBE2L3-202ENST00000458578 LRP6O75581 1613 aa12.85□□□□□ -0.35
UBE2L3-202ENST00000458578 PARP4Q9UKK3 1724 aaKnown RBP12.85□□□□□ -0.35
UBE2L3-202ENST00000458578 HEXIM1O94992 359 aaKnown RBP12.85□□□□□ -0.35
UBE2L3-202ENST00000458578 CRKLP46109 303 aaKnown RBP12.85□□□□□ -0.35
UBE2L3-202ENST00000458578 STAG2Q8N3U4 1231 aa12.85□□□□□ -0.35
UBE2L3-202ENST00000458578 PYM1Q9BRP8 204 aaKnown RBP12.85□□□□□ -0.35
UBE2L3-202ENST00000458578 NUP58Q9BVL2 599 aa12.85□□□□□ -0.35
UBE2L3-202ENST00000458578 CD248Q9HCU0 757 aa12.85□□□□□ -0.35
UBE2L3-202ENST00000458578 HYOU1Q9Y4L1 999 aa12.85□□□□□ -0.35
UBE2L3-202ENST00000458578 LRRC53A6NM62 1247 aa12.84□□□□□ -0.35
UBE2L3-202ENST00000458578 SETQ01105 290 aaPredicted RBP12.84□□□□□ -0.35
UBE2L3-202ENST00000458578 IFT88Q13099 833 aa12.84□□□□□ -0.35
UBE2L3-202ENST00000458578 GBP6Q6ZN66 633 aa12.84□□□□□ -0.35
UBE2L3-202ENST00000458578 C3orf67Q6ZVT6 689 aa12.84□□□□□ -0.35
UBE2L3-202ENST00000458578 DYMQ7RTS9 669 aa12.84□□□□□ -0.35
UBE2L3-202ENST00000458578 POTEDQ86YR6 584 aa12.84□□□□□ -0.35
UBE2L3-202ENST00000458578 GIMAP8Q8ND71 665 aaPredicted RBP12.84□□□□□ -0.35
UBE2L3-202ENST00000458578 SH3GL2Q99962 352 aa12.84□□□□□ -0.35
UBE2L3-202ENST00000458578 TFCP2L1Q9NZI6 479 aa12.84□□□□□ -0.35
UBE2L3-202ENST00000458578 SLC1A4P43007 532 aa12.84□□□□□ -0.35
UBE2L3-202ENST00000458578 PPP2R5BQ15173 497 aa12.84□□□□□ -0.35
UBE2L3-202ENST00000458578 MIIPQ5JXC2 388 aa12.84□□□□□ -0.35
UBE2L3-202ENST00000458578 CACNA2D4Q7Z3S7 1137 aa12.84□□□□□ -0.35
UBE2L3-202ENST00000458578 KLHL7Q8IXQ5 586 aa12.84□□□□□ -0.35
UBE2L3-202ENST00000458578 MTMR8Q96EF0 704 aa12.84□□□□□ -0.35
UBE2L3-202ENST00000458578 KRT12Q99456 494 aa12.84□□□□□ -0.35
UBE2L3-202ENST00000458578 TSGA10Q9BZW7 698 aa12.84□□□□□ -0.35
UBE2L3-202ENST00000458578 KANSL2Q9H9L4 492 aa12.84□□□□□ -0.35
UBE2L3-202ENST00000458578 BCCIPQ9P287 314 aaKnown RBP eCLIP12.84□□□□□ -0.35
UBE2L3-202ENST00000458578 ERVV-1B6SEH8 477 aa12.83□□□□□ -0.35
UBE2L3-202ENST00000458578 E7EVH7 732 aa12.83□□□□□ -0.35
UBE2L3-202ENST00000458578 KLRK1P26718 216 aa12.83□□□□□ -0.35
UBE2L3-202ENST00000458578 LSP1P33241 339 aa12.83□□□□□ -0.35
UBE2L3-202ENST00000458578 RCAN1P53805 252 aa12.83□□□□□ -0.35
UBE2L3-202ENST00000458578 HLTFQ14527 1009 aaKnown RBP eCLIP12.83□□□□□ -0.35
UBE2L3-202ENST00000458578 PFKFB3Q16875 520 aaPredicted RBP12.83□□□□□ -0.35
UBE2L3-202ENST00000458578 LETM2Q2VYF4 491 aa12.83□□□□□ -0.35
UBE2L3-202ENST00000458578 BCL9LQ86UU0 1499 aa12.83□□□□□ -0.36
UBE2L3-202ENST00000458578 ZNF233A6NK53 670 aa12.83□□□□□ -0.36
UBE2L3-202ENST00000458578 RHOBTB3O94955 611 aa12.83□□□□□ -0.36
UBE2L3-202ENST00000458578 CALM1P0DP23 149 aa12.83□□□□□ -0.36
UBE2L3-202ENST00000458578 CALM2P0DP24 149 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms