RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 SNAP25P60880 206 aa12.32□□□□□ -0.44
HDLBP-227ENST00000458564 PSMC6P62333 389 aa12.32□□□□□ -0.44
HDLBP-227ENST00000458564 PURAQ00577 322 aaKnown RBP12.32□□□□□ -0.44
HDLBP-227ENST00000458564 CTDSPL2Q05D32 466 aa12.32□□□□□ -0.44
HDLBP-227ENST00000458564 TMEM63BQ5T3F8 832 aa12.32□□□□□ -0.44
HDLBP-227ENST00000458564 KIAA1211Q6ZU35 1233 aa12.32□□□□□ -0.44
HDLBP-227ENST00000458564 TICAM2Q86XR7 235 aa12.32□□□□□ -0.44
HDLBP-227ENST00000458564 NKX2-4Q9H2Z4 354 aa12.32□□□□□ -0.44
HDLBP-227ENST00000458564 POLR3EQ9NVU0 708 aa12.32□□□□□ -0.44
HDLBP-227ENST00000458564 PNMA2Q9UL42 364 aa12.32□□□□□ -0.44
HDLBP-227ENST00000458564 PCDHB15Q9Y5E8 787 aa12.32□□□□□ -0.44
HDLBP-227ENST00000458564 PCDHA11Q9Y5I1 949 aa12.32□□□□□ -0.44
HDLBP-227ENST00000458564 BDP1A6H8Y1 2624 aa12.32□□□□□ -0.44
HDLBP-227ENST00000458564 ZMYM6O95789 1325 aa12.32□□□□□ -0.44
HDLBP-227ENST00000458564 NFIBO00712 420 aa12.31□□□□□ -0.44
HDLBP-227ENST00000458564 RANBP6O60518 1105 aaKnown RBP12.31□□□□□ -0.44
HDLBP-227ENST00000458564 TOP1P11387 765 aaKnown RBP12.31□□□□□ -0.44
HDLBP-227ENST00000458564 CPT1AP50416 773 aa12.31□□□□□ -0.44
HDLBP-227ENST00000458564 MRPS5P82675 430 aaKnown RBP12.31□□□□□ -0.44
HDLBP-227ENST00000458564 BAATQ14032 418 aaPredicted RBP12.31□□□□□ -0.44
HDLBP-227ENST00000458564 CCDC96Q2M329 555 aa12.31□□□□□ -0.44
HDLBP-227ENST00000458564 VPS53Q5VIR6 699 aa12.31□□□□□ -0.44
HDLBP-227ENST00000458564 SYDE2Q5VT97 1194 aa12.31□□□□□ -0.44
HDLBP-227ENST00000458564 CHMP4CQ96CF2 233 aa12.31□□□□□ -0.44
HDLBP-227ENST00000458564 PURBQ96QR8 312 aaKnown RBP12.31□□□□□ -0.44
HDLBP-227ENST00000458564 WDR11Q9BZH6 1224 aa12.31□□□□□ -0.44
HDLBP-227ENST00000458564 INCENPQ9NQS7 918 aa12.31□□□□□ -0.44
HDLBP-227ENST00000458564 TCP11L1Q9NUJ3 509 aa12.31□□□□□ -0.44
HDLBP-227ENST00000458564 SLC4A7Q9Y6M7 1214 aa12.31□□□□□ -0.44
HDLBP-227ENST00000458564 TNKSO95271 1327 aa12.31□□□□□ -0.44
HDLBP-227ENST00000458564 SCN10AQ9Y5Y9 1956 aa12.3□□□□□ -0.44
HDLBP-227ENST00000458564 GBF1Q92538 1859 aa12.3□□□□□ -0.44
HDLBP-227ENST00000458564 NKRFO15226 690 aaKnown RBP eCLIP12.3□□□□□ -0.441e-8■■□□□ 12.2
HDLBP-227ENST00000458564 ATP2A2P16615 1042 aaKnown RBP12.3□□□□□ -0.44
HDLBP-227ENST00000458564 EDNRBP24530 442 aa12.3□□□□□ -0.44
HDLBP-227ENST00000458564 PPP2R2DQ66LE6 453 aa12.3□□□□□ -0.44
HDLBP-227ENST00000458564 TTBK2Q6IQ55 1244 aa12.3□□□□□ -0.44
HDLBP-227ENST00000458564 CLEC4DQ8WXI8 215 aa12.3□□□□□ -0.44
HDLBP-227ENST00000458564 PPM1EQ8WY54 764 aa12.3□□□□□ -0.44
HDLBP-227ENST00000458564 EVI5LQ96CN4 794 aa12.3□□□□□ -0.44
HDLBP-227ENST00000458564 SCLYQ96I15 445 aa12.3□□□□□ -0.44
HDLBP-227ENST00000458564 TMEM47Q9BQJ4 181 aa12.3□□□□□ -0.44
HDLBP-227ENST00000458564 MTG1Q9BT17 334 aaPredicted RBP12.3□□□□□ -0.44
HDLBP-227ENST00000458564 HELLSQ9NRZ9 838 aa12.3□□□□□ -0.44
HDLBP-227ENST00000458564 TRMT13Q9NUP7 481 aaKnown RBP12.3□□□□□ -0.44
HDLBP-227ENST00000458564 WDR19Q8NEZ3 1342 aa12.3□□□□□ -0.44
HDLBP-227ENST00000458564 RAD50Q92878 1312 aa12.3□□□□□ -0.44
HDLBP-227ENST00000458564 PITPNM1O00562 1244 aa12.29□□□□□ -0.44
HDLBP-227ENST00000458564 SNHG28P0DPA3 235 aa12.29□□□□□ -0.44
HDLBP-227ENST00000458564 PDHBP11177 359 aa12.29□□□□□ -0.44
HDLBP-227ENST00000458564 PCP11498 1178 aaKnown RBP12.29□□□□□ -0.44
HDLBP-227ENST00000458564 POU3F3P20264 500 aaPredicted RBP12.29□□□□□ -0.44
HDLBP-227ENST00000458564 IGFBP4P22692 258 aa12.29□□□□□ -0.44
HDLBP-227ENST00000458564 RFC2P35250 354 aa12.29□□□□□ -0.44
HDLBP-227ENST00000458564 SLC16A2P36021 539 aa12.29□□□□□ -0.44
HDLBP-227ENST00000458564 RABGGTBP53611 331 aa12.29□□□□□ -0.44
HDLBP-227ENST00000458564 PPP2R5BQ15173 497 aa12.29□□□□□ -0.44
HDLBP-227ENST00000458564 NFRKBQ6P4R8 1299 aa12.29□□□□□ -0.44
HDLBP-227ENST00000458564 SLC30A10Q6XR72 485 aa12.29□□□□□ -0.44
HDLBP-227ENST00000458564 DNERQ8NFT8 737 aa12.29□□□□□ -0.44
HDLBP-227ENST00000458564 ADAMTS19Q8TE59 1207 aa12.29□□□□□ -0.44
HDLBP-227ENST00000458564 SCFD2Q8WU76 684 aa12.29□□□□□ -0.44
HDLBP-227ENST00000458564 PTPDC1A2A3K4 754 aa12.28□□□□□ -0.44
HDLBP-227ENST00000458564 A6NJR5 290 aa12.28□□□□□ -0.44
HDLBP-227ENST00000458564 KPNA6O60684 536 aa12.28□□□□□ -0.44
HDLBP-227ENST00000458564 FGAP02671 866 aa12.28□□□□□ -0.44
HDLBP-227ENST00000458564 CYP2C9P11712 490 aa12.28□□□□□ -0.44
HDLBP-227ENST00000458564 PTPN11Q06124 597 aaPredicted RBP12.28□□□□□ -0.44
HDLBP-227ENST00000458564 ZNF543Q08ER8 600 aa12.28□□□□□ -0.44
HDLBP-227ENST00000458564 TTLL4Q14679 1199 aa12.28□□□□□ -0.44
HDLBP-227ENST00000458564 BRDTQ58F21 947 aaPredicted RBP12.28□□□□□ -0.44
HDLBP-227ENST00000458564 RNF207Q6ZRF8 634 aa12.28□□□□□ -0.44
HDLBP-227ENST00000458564 OR6J1Q8NGC5 347 aa12.28□□□□□ -0.44
HDLBP-227ENST00000458564 PHOSPHO2Q8TCD6 241 aa12.28□□□□□ -0.44
HDLBP-227ENST00000458564 TTC14Q96N46 770 aa12.28□□□□□ -0.44
HDLBP-227ENST00000458564 UHRF1Q96T88 793 aaPredicted RBP12.28□□□□□ -0.44
HDLBP-227ENST00000458564 MPHOSPH6Q99547 160 aaKnown RBP12.28□□□□□ -0.44
HDLBP-227ENST00000458564 MAF1Q9H063 256 aa12.28□□□□□ -0.44
HDLBP-227ENST00000458564 MTMR7Q9Y216 660 aa12.28□□□□□ -0.44
HDLBP-227ENST00000458564 A0A0D9SFI3 127 aa12.27□□□□□ -0.45
HDLBP-227ENST00000458564 ZBBXA8MT70 800 aa12.27□□□□□ -0.45
HDLBP-227ENST00000458564 MYL3P08590 195 aa12.27□□□□□ -0.45
HDLBP-227ENST00000458564 ACTN1P12814 892 aa12.27□□□□□ -0.45
HDLBP-227ENST00000458564 MYOGP15173 224 aa12.27□□□□□ -0.45
HDLBP-227ENST00000458564 CALML3P27482 149 aa12.27□□□□□ -0.45
HDLBP-227ENST00000458564 RPS6P62753 249 aaKnown RBP12.27□□□□□ -0.45
HDLBP-227ENST00000458564 PDE4DQ08499 809 aa12.27□□□□□ -0.45
HDLBP-227ENST00000458564 CCDC85BQ15834 202 aaPredicted RBP12.27□□□□□ -0.45
HDLBP-227ENST00000458564 NBPF20Q3BBV1 942 aa12.27□□□□□ -0.45
HDLBP-227ENST00000458564 MCMDC2Q4G0Z9 681 aa12.27□□□□□ -0.45
HDLBP-227ENST00000458564 RGS22Q8NE09 1264 aa12.27□□□□□ -0.45
HDLBP-227ENST00000458564 SLC9A7Q96T83 725 aa12.27□□□□□ -0.45
HDLBP-227ENST00000458564 TSPYL2Q9H2G4 693 aaPredicted RBP12.27□□□□□ -0.45
HDLBP-227ENST00000458564 GPHNQ9NQX3 736 aaPredicted RBP12.27□□□□□ -0.45
HDLBP-227ENST00000458564 FRMPD2Q68DX3 1309 aaPredicted RBP12.27□□□□□ -0.45
HDLBP-227ENST00000458564 TANC1Q9C0D5 1861 aa12.27□□□□□ -0.45
HDLBP-227ENST00000458564 B4DLN1 442 aa12.26□□□□□ -0.45
HDLBP-227ENST00000458564 CA3P07451 260 aa12.26□□□□□ -0.45
HDLBP-227ENST00000458564 HSPD1P10809 573 aaKnown RBP12.26□□□□□ -0.45
HDLBP-227ENST00000458564 COL9A1P20849 921 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms