RNA–Protein interactions for RNA: ENST00000457226.2

SMARCA2-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-216ENST00000457226 TMEM265A0A087WTH1 108 aa15.7■□□□□ 0.1
SMARCA2-216ENST00000457226 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.7■□□□□ 0.1
SMARCA2-216ENST00000457226 B4E1Z4 1266 aa15.7■□□□□ 0.1
SMARCA2-216ENST00000457226 NKRFO15226 690 aaKnown RBP eCLIP15.7■□□□□ 0.1
SMARCA2-216ENST00000457226 CALML3P27482 149 aa15.7■□□□□ 0.1
SMARCA2-216ENST00000457226 CPT1AP50416 773 aa15.7■□□□□ 0.1
SMARCA2-216ENST00000457226 PDE4DQ08499 809 aa15.7■□□□□ 0.1
SMARCA2-216ENST00000457226 TRDNQ13061 729 aa15.7■□□□□ 0.1
SMARCA2-216ENST00000457226 TTC22Q5TAA0 569 aa15.7■□□□□ 0.1
SMARCA2-216ENST00000457226 CXCL17Q6UXB2 119 aa15.7■□□□□ 0.1
SMARCA2-216ENST00000457226 EEPD1Q7L9B9 569 aa15.7■□□□□ 0.1
SMARCA2-216ENST00000457226 MCF2L2Q86YR7 1114 aa15.7■□□□□ 0.1
SMARCA2-216ENST00000457226 FAM126BQ8IXS8 530 aa15.7■□□□□ 0.1
SMARCA2-216ENST00000457226 CLEC4DQ8WXI8 215 aa15.7■□□□□ 0.1
SMARCA2-216ENST00000457226 WDR11Q9BZH6 1224 aa15.7■□□□□ 0.1
SMARCA2-216ENST00000457226 POLR3EQ9NVU0 708 aa15.7■□□□□ 0.1
SMARCA2-216ENST00000457226 ZSWIM5Q9P217 1185 aa15.7■□□□□ 0.1
SMARCA2-216ENST00000457226 TNKSO95271 1327 aa15.69■□□□□ 0.1
SMARCA2-216ENST00000457226 ABCB11O95342 1321 aa15.69■□□□□ 0.1
SMARCA2-216ENST00000457226 RBM47A0AV96 593 aaKnown RBP15.69■□□□□ 0.1
SMARCA2-216ENST00000457226 PARP1P09874 1014 aaKnown RBP15.69■□□□□ 0.1
SMARCA2-216ENST00000457226 ITGB8P26012 769 aa15.69■□□□□ 0.1
SMARCA2-216ENST00000457226 RPS6P62753 249 aaKnown RBP15.69■□□□□ 0.1
SMARCA2-216ENST00000457226 BEX3Q00994 111 aa15.69■□□□□ 0.1
SMARCA2-216ENST00000457226 TRAF1Q13077 416 aa15.69■□□□□ 0.1
SMARCA2-216ENST00000457226 ITGA7Q13683 1181 aa15.69■□□□□ 0.1
SMARCA2-216ENST00000457226 ENAHQ8N8S7 591 aaPredicted RBP15.69■□□□□ 0.1
SMARCA2-216ENST00000457226 SLC43A3Q8NBI5 491 aa15.69■□□□□ 0.1
SMARCA2-216ENST00000457226 SCFD2Q8WU76 684 aa15.69■□□□□ 0.1
SMARCA2-216ENST00000457226 PDGFCQ9NRA1 345 aa15.69■□□□□ 0.1
SMARCA2-216ENST00000457226 U3KPZ7 1027 aaPredicted RBP15.69■□□□□ 0.1
SMARCA2-216ENST00000457226 DHX16O60231 1041 aaKnown RBP15.68■□□□□ 0.1
SMARCA2-216ENST00000457226 KPNA6O60684 536 aa15.68■□□□□ 0.1
SMARCA2-216ENST00000457226 GOLGA8HP0CJ92 632 aa15.68■□□□□ 0.1
SMARCA2-216ENST00000457226 PPP2R5BQ15173 497 aa15.68■□□□□ 0.1
SMARCA2-216ENST00000457226 CDC37Q16543 378 aaPredicted RBP15.68■□□□□ 0.1
SMARCA2-216ENST00000457226 IFIT1BQ5T764 474 aaKnown RBP15.68■□□□□ 0.1
SMARCA2-216ENST00000457226 PSRC1Q6PGN9 363 aaPredicted RBP15.68■□□□□ 0.1
SMARCA2-216ENST00000457226 SLC30A10Q6XR72 485 aa15.68■□□□□ 0.1
SMARCA2-216ENST00000457226 GPHNQ9NQX3 736 aaPredicted RBP15.68■□□□□ 0.1
SMARCA2-216ENST00000457226 MRPL11Q9Y3B7 192 aaKnown RBP15.68■□□□□ 0.1
SMARCA2-216ENST00000457226 SMCHD1A6NHR9 2005 aa15.68■□□□□ 0.1
SMARCA2-216ENST00000457226 LAMA4Q16363 1823 aa15.68■□□□□ 0.1
SMARCA2-216ENST00000457226 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.67■□□□□ 0.1
SMARCA2-216ENST00000457226 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.67■□□□□ 0.1
SMARCA2-216ENST00000457226 CD4P01730 458 aa15.67■□□□□ 0.1
SMARCA2-216ENST00000457226 SUPT20HL2P0C7V6 817 aa15.67■□□□□ 0.1
SMARCA2-216ENST00000457226 EDNRBP24530 442 aa15.67■□□□□ 0.1
SMARCA2-216ENST00000457226 IRX5P78411 483 aaPredicted RBP15.67■□□□□ 0.1
SMARCA2-216ENST00000457226 USH1GQ495M9 461 aa15.67■□□□□ 0.1
SMARCA2-216ENST00000457226 ADGRF4Q8IZF3 695 aa15.67■□□□□ 0.1
SMARCA2-216ENST00000457226 PURBQ96QR8 312 aaKnown RBP15.67■□□□□ 0.1
SMARCA2-216ENST00000457226 UBA5Q9GZZ9 404 aa15.67■□□□□ 0.1
SMARCA2-216ENST00000457226 MTIF3Q9H2K0 278 aaKnown RBP15.67■□□□□ 0.1
SMARCA2-216ENST00000457226 ERICH2A1L162 156 aa15.66■□□□□ 0.1
SMARCA2-216ENST00000457226 EPHB4P54760 987 aa15.66■□□□□ 0.1
SMARCA2-216ENST00000457226 TTLL4Q14679 1199 aa15.66■□□□□ 0.1
SMARCA2-216ENST00000457226 SART3Q15020 963 aaKnown RBP15.66■□□□□ 0.1
SMARCA2-216ENST00000457226 FBXO11Q86XK2 927 aa15.66■□□□□ 0.1
SMARCA2-216ENST00000457226 NSUN6Q8TEA1 469 aaKnown RBP15.66■□□□□ 0.1
SMARCA2-216ENST00000457226 IWS1Q96ST2 819 aa15.66■□□□□ 0.1
SMARCA2-216ENST00000457226 HIPK3Q9H422 1215 aa15.66■□□□□ 0.1
SMARCA2-216ENST00000457226 MAP3K20Q9NYL2 800 aaKnown RBP15.66■□□□□ 0.1
SMARCA2-216ENST00000457226 LRRC37A2A6NM11 1700 aa15.65■□□□□ 0.1
SMARCA2-216ENST00000457226 GSPT1P15170 499 aaKnown RBP15.65■□□□□ 0.1
SMARCA2-216ENST00000457226 PDE4AP27815 886 aa15.65■□□□□ 0.1
SMARCA2-216ENST00000457226 RALYLQ86SE5 291 aaKnown RBP15.65■□□□□ 0.1
SMARCA2-216ENST00000457226 SAMD3Q8N6K7 520 aa15.65■□□□□ 0.1
SMARCA2-216ENST00000457226 OR6J1Q8NGC5 347 aa15.65■□□□□ 0.1
SMARCA2-216ENST00000457226 MTG1Q9BT17 334 aaPredicted RBP15.65■□□□□ 0.1
SMARCA2-216ENST00000457226 AMNQ9BXJ7 453 aa15.65■□□□□ 0.1
SMARCA2-216ENST00000457226 SEMA6BQ9H3T3 888 aa15.65■□□□□ 0.1
SMARCA2-216ENST00000457226 TXNP10599 105 aaKnown RBP15.64■□□□□ 0.09
SMARCA2-216ENST00000457226 CSF2RAP15509 400 aa15.64■□□□□ 0.09
SMARCA2-216ENST00000457226 CHMLP26374 656 aa15.64■□□□□ 0.09
SMARCA2-216ENST00000457226 PURAQ00577 322 aaKnown RBP15.64■□□□□ 0.09
SMARCA2-216ENST00000457226 STXBP2Q15833 593 aa15.64■□□□□ 0.09
SMARCA2-216ENST00000457226 GUCD1Q96NT3 240 aa15.64■□□□□ 0.09
SMARCA2-216ENST00000457226 PPP1R12CQ9BZL4 782 aa15.64■□□□□ 0.09
SMARCA2-216ENST00000457226 JMJD4Q9H9V9 463 aa15.64■□□□□ 0.09
SMARCA2-216ENST00000457226 IL23AQ9NPF7 189 aa15.64■□□□□ 0.09
SMARCA2-216ENST00000457226 DDX49Q9Y6V7 483 aaKnown RBP15.64■□□□□ 0.09
SMARCA2-216ENST00000457226 A6NJR5 290 aa15.63■□□□□ 0.09
SMARCA2-216ENST00000457226 KLRF2D3W0D1 207 aa15.63■□□□□ 0.09
SMARCA2-216ENST00000457226 QRICH1Q2TAL8 776 aa15.63■□□□□ 0.09
SMARCA2-216ENST00000457226 RPUSD2Q8IZ73 545 aaKnown RBP15.63■□□□□ 0.09
SMARCA2-216ENST00000457226 FAM161BQ96MY7 647 aa15.63■□□□□ 0.09
SMARCA2-216ENST00000457226 RMDN3Q96TC7 470 aa15.63■□□□□ 0.09
SMARCA2-216ENST00000457226 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.63■□□□□ 0.09
SMARCA2-216ENST00000457226 ALDH8A1Q9H2A2 487 aaPredicted RBP15.63■□□□□ 0.09
SMARCA2-216ENST00000457226 CPVLQ9H3G5 476 aa15.63■□□□□ 0.09
SMARCA2-216ENST00000457226 GRIN2DO15399 1336 aa15.63■□□□□ 0.09
SMARCA2-216ENST00000457226 ZBTB5O15062 677 aa15.62■□□□□ 0.09
SMARCA2-216ENST00000457226 B4GALT4O60513 344 aa15.62■□□□□ 0.09
SMARCA2-216ENST00000457226 MYL3P08590 195 aa15.62■□□□□ 0.09
SMARCA2-216ENST00000457226 PTPN11Q06124 597 aaPredicted RBP15.62■□□□□ 0.09
SMARCA2-216ENST00000457226 SEC23AQ15436 765 aa15.62■□□□□ 0.09
SMARCA2-216ENST00000457226 TMEM240Q5SV17 173 aa15.62■□□□□ 0.09
SMARCA2-216ENST00000457226 ARHGEF16Q5VV41 709 aa15.62■□□□□ 0.09
SMARCA2-216ENST00000457226 NFRKBQ6P4R8 1299 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms