RNA–Protein interactions for RNA: ENST00000457080.5

MITF-211, Transcript of melanogenesis associated transcription factor, human

TSL 1 (best)

Gene MITF, Length 382 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MITF-211	ENST00000457080	DYNC1LI2	O43237	492 aa	Predicted RBP	13.79	□□□□□ -0.2
MITF-211	ENST00000457080	DHX16	O60231	1041 aa	Known RBP	13.79	□□□□□ -0.2
MITF-211	ENST00000457080	TIMP1	P01033	207 aa		13.79	□□□□□ -0.2
MITF-211	ENST00000457080	GOLGA8H	P0CJ92	632 aa		13.79	□□□□□ -0.2
MITF-211	ENST00000457080	CDK7	P50613	346 aa		13.79	□□□□□ -0.2
MITF-211	ENST00000457080	RPS6	P62753	249 aa	Known RBP	13.79	□□□□□ -0.2
MITF-211	ENST00000457080	IRX5	P78411	483 aa	Predicted RBP	13.79	□□□□□ -0.2
MITF-211	ENST00000457080	SMAD3	P84022	425 aa	Known RBP	13.79	□□□□□ -0.2
MITF-211	ENST00000457080	BEX3	Q00994	111 aa		13.79	□□□□□ -0.2
MITF-211	ENST00000457080	TRDN	Q13061	729 aa		13.79	□□□□□ -0.2
MITF-211	ENST00000457080	USH1G	Q495M9	461 aa		13.79	□□□□□ -0.2
MITF-211	ENST00000457080	DUSP28	Q4G0W2	176 aa		13.79	□□□□□ -0.2
MITF-211	ENST00000457080	BRDT	Q58F21	947 aa	Predicted RBP	13.79	□□□□□ -0.2
MITF-211	ENST00000457080	IFIT1B	Q5T764	474 aa	Known RBP	13.79	□□□□□ -0.2
MITF-211	ENST00000457080	TAPT1	Q6NXT6	567 aa		13.79	□□□□□ -0.2
MITF-211	ENST00000457080	ENAH	Q8N8S7	591 aa	Predicted RBP	13.79	□□□□□ -0.2
MITF-211	ENST00000457080	RGS22	Q8NE09	1264 aa		13.79	□□□□□ -0.2
MITF-211	ENST00000457080	DNER	Q8NFT8	737 aa		13.79	□□□□□ -0.2
MITF-211	ENST00000457080	CLEC4D	Q8WXI8	215 aa		13.79	□□□□□ -0.2
MITF-211	ENST00000457080	PDGFC	Q9NRA1	345 aa		13.79	□□□□□ -0.2
MITF-211	ENST00000457080	ZSWIM5	Q9P217	1185 aa		13.79	□□□□□ -0.2
MITF-211	ENST00000457080	TBX21	Q9UL17	535 aa		13.79	□□□□□ -0.2
MITF-211	ENST00000457080	PARP1	P09874	1014 aa	Known RBP	13.78	□□□□□ -0.2
MITF-211	ENST00000457080	GSPT1	P15170	499 aa	Known RBP	13.78	□□□□□ -0.2
MITF-211	ENST00000457080	ITGB8	P26012	769 aa		13.78	□□□□□ -0.2
MITF-211	ENST00000457080	PDE4A	P27815	886 aa		13.78	□□□□□ -0.2
MITF-211	ENST00000457080	CPT1A	P50416	773 aa		13.78	□□□□□ -0.2
MITF-211	ENST00000457080	PPIG	Q13427	754 aa	Known RBP eCLIP	13.78	□□□□□ -0.2
MITF-211	ENST00000457080	CDC37	Q16543	378 aa	Predicted RBP	13.78	□□□□□ -0.2
MITF-211	ENST00000457080	MFSD5	Q6N075	450 aa		13.78	□□□□□ -0.2
MITF-211	ENST00000457080	CXCL17	Q6UXB2	119 aa		13.78	□□□□□ -0.2
MITF-211	ENST00000457080	FAM126B	Q8IXS8	530 aa		13.78	□□□□□ -0.2
MITF-211	ENST00000457080	PURB	Q96QR8	312 aa	Known RBP	13.78	□□□□□ -0.2
MITF-211	ENST00000457080	WDR11	Q9BZH6	1224 aa		13.78	□□□□□ -0.2
MITF-211	ENST00000457080	UBA5	Q9GZZ9	404 aa		13.78	□□□□□ -0.2
MITF-211	ENST00000457080		U3KPZ7	1027 aa	Predicted RBP	13.78	□□□□□ -0.2
MITF-211	ENST00000457080	ABCB11	O95342	1321 aa		13.78	□□□□□ -0.2
MITF-211	ENST00000457080	LAMA2	P24043	3122 aa	Known RBP	13.78	□□□□□ -0.2
MITF-211	ENST00000457080	NKRF	O15226	690 aa	Known RBP eCLIP	13.77	□□□□□ -0.21
MITF-211	ENST00000457080	ITGA7	Q13683	1181 aa		13.77	□□□□□ -0.21
MITF-211	ENST00000457080	PPP2R5B	Q15173	497 aa		13.77	□□□□□ -0.21
MITF-211	ENST00000457080	MCF2L2	Q86YR7	1114 aa		13.77	□□□□□ -0.21
MITF-211	ENST00000457080	ADGRF4	Q8IZF3	695 aa		13.77	□□□□□ -0.21
MITF-211	ENST00000457080	TMEM199	Q8N511	208 aa		13.77	□□□□□ -0.21
MITF-211	ENST00000457080	SLC17A8	Q8NDX2	589 aa		13.77	□□□□□ -0.21
MITF-211	ENST00000457080	SCFD2	Q8WU76	684 aa		13.77	□□□□□ -0.21
MITF-211	ENST00000457080	POLR3E	Q9NVU0	708 aa		13.77	□□□□□ -0.21
MITF-211	ENST00000457080	DDX49	Q9Y6V7	483 aa	Known RBP	13.77	□□□□□ -0.21
MITF-211	ENST00000457080	RBM47	A0AV96	593 aa	Known RBP	13.76	□□□□□ -0.21
MITF-211	ENST00000457080	ERICH2	A1L162	156 aa		13.76	□□□□□ -0.21
MITF-211	ENST00000457080	EDNRB	P24530	442 aa		13.76	□□□□□ -0.21
MITF-211	ENST00000457080	PSRC1	Q6PGN9	363 aa	Predicted RBP	13.76	□□□□□ -0.21
MITF-211	ENST00000457080	RALYL	Q86SE5	291 aa	Known RBP	13.76	□□□□□ -0.21
MITF-211	ENST00000457080	SLC43A3	Q8NBI5	491 aa		13.76	□□□□□ -0.21
MITF-211	ENST00000457080	OR6J1	Q8NGC5	347 aa		13.76	□□□□□ -0.21
MITF-211	ENST00000457080	PPP1R12C	Q9BZL4	782 aa		13.76	□□□□□ -0.21
MITF-211	ENST00000457080	GPHN	Q9NQX3	736 aa	Predicted RBP	13.76	□□□□□ -0.21
MITF-211	ENST00000457080	MRPL11	Q9Y3B7	192 aa	Known RBP	13.76	□□□□□ -0.21
MITF-211	ENST00000457080	TMEM265	A0A087WTH1	108 aa		13.75	□□□□□ -0.21
MITF-211	ENST00000457080	CD4	P01730	458 aa		13.75	□□□□□ -0.21
MITF-211	ENST00000457080	CHML	P26374	656 aa		13.75	□□□□□ -0.21
MITF-211	ENST00000457080	EPHB4	P54760	987 aa		13.75	□□□□□ -0.21
MITF-211	ENST00000457080	IRX6	P78412	446 aa	Predicted RBP	13.75	□□□□□ -0.21
MITF-211	ENST00000457080	SART3	Q15020	963 aa	Known RBP	13.75	□□□□□ -0.21
MITF-211	ENST00000457080	QRICH1	Q2TAL8	776 aa		13.75	□□□□□ -0.21
MITF-211	ENST00000457080	FBXO11	Q86XK2	927 aa		13.75	□□□□□ -0.21
MITF-211	ENST00000457080	CPVL	Q9H3G5	476 aa		13.75	□□□□□ -0.21
MITF-211	ENST00000457080	COL6A3	P12111	3177 aa		13.75	□□□□□ -0.21
MITF-211	ENST00000457080	KPNA6	O60684	536 aa		13.74	□□□□□ -0.21
MITF-211	ENST00000457080	TRAF1	Q13077	416 aa		13.74	□□□□□ -0.21
MITF-211	ENST00000457080	TTLL4	Q14679	1199 aa		13.74	□□□□□ -0.21
MITF-211	ENST00000457080	NSUN6	Q8TEA1	469 aa	Known RBP	13.74	□□□□□ -0.21
MITF-211	ENST00000457080	FAM161B	Q96MY7	647 aa		13.74	□□□□□ -0.21
MITF-211	ENST00000457080	MTG1	Q9BT17	334 aa	Predicted RBP	13.74	□□□□□ -0.21
MITF-211	ENST00000457080	AMN	Q9BXJ7	453 aa		13.74	□□□□□ -0.21
MITF-211	ENST00000457080	IL25	Q9H293	177 aa		13.74	□□□□□ -0.21
MITF-211	ENST00000457080	MTIF3	Q9H2K0	278 aa	Known RBP	13.74	□□□□□ -0.21
MITF-211	ENST00000457080	HIPK3	Q9H422	1215 aa		13.74	□□□□□ -0.21
MITF-211	ENST00000457080	VAT1L	Q9HCJ6	419 aa		13.74	□□□□□ -0.21
MITF-211	ENST00000457080	MYH6	P13533	1939 aa		13.73	□□□□□ -0.21
MITF-211	ENST00000457080	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	13.73	□□□□□ -0.21
MITF-211	ENST00000457080	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	13.73	□□□□□ -0.21
MITF-211	ENST00000457080	KLRF2	D3W0D1	207 aa		13.73	□□□□□ -0.21
MITF-211	ENST00000457080	MYL3	P08590	195 aa		13.73	□□□□□ -0.21
MITF-211	ENST00000457080	CYP21A2	P08686	494 aa		13.73	□□□□□ -0.21
MITF-211	ENST00000457080	SUPT20HL2	P0C7V6	817 aa		13.73	□□□□□ -0.21
MITF-211	ENST00000457080	TXN	P10599	105 aa	Known RBP	13.73	□□□□□ -0.21
MITF-211	ENST00000457080	CSF2RA	P15509	400 aa		13.73	□□□□□ -0.21
MITF-211	ENST00000457080	PURA	Q00577	322 aa	Known RBP	13.73	□□□□□ -0.21
MITF-211	ENST00000457080	SEC23A	Q15436	765 aa		13.73	□□□□□ -0.21
MITF-211	ENST00000457080	TMEM63B	Q5T3F8	832 aa		13.73	□□□□□ -0.21
MITF-211	ENST00000457080	NCOA7	Q8NI08	942 aa		13.73	□□□□□ -0.21
MITF-211	ENST00000457080	SYTL5	Q8TDW5	730 aa	Predicted RBP	13.73	□□□□□ -0.21
MITF-211	ENST00000457080	GUCD1	Q96NT3	240 aa		13.73	□□□□□ -0.21
MITF-211	ENST00000457080	IWS1	Q96ST2	819 aa		13.73	□□□□□ -0.21
MITF-211	ENST00000457080	JMJD4	Q9H9V9	463 aa		13.73	□□□□□ -0.21
MITF-211	ENST00000457080	IFIT3	O14879	490 aa	Known RBP	13.72	□□□□□ -0.21
MITF-211	ENST00000457080	SGSM2	O43147	1006 aa		13.72	□□□□□ -0.21
MITF-211	ENST00000457080	B4GALT4	O60513	344 aa		13.72	□□□□□ -0.21
MITF-211	ENST00000457080	PTGS1	P23219	599 aa		13.72	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms