RNA–Protein interactions for RNA: ENST00000456075.5

TOP3B-212, Transcript of DNA topoisomerase III beta, humanhuman

TSL 4

Gene TOP3B, Length 561 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-212ENST00000456075 SLC34A2O95436 690 aa11.98□□□□□ -0.49
TOP3B-212ENST00000456075 SNAI1O95863 264 aaPredicted RBP11.98□□□□□ -0.49
TOP3B-212ENST00000456075 CFBP00751 764 aa11.98□□□□□ -0.49
TOP3B-212ENST00000456075 ZNF865P0CJ78 1059 aaPredicted RBP11.98□□□□□ -0.49
TOP3B-212ENST00000456075 CPA1P15085 419 aa11.98□□□□□ -0.49
TOP3B-212ENST00000456075 SMARCA1P28370 1054 aa11.98□□□□□ -0.49
TOP3B-212ENST00000456075 ALDH5A1P51649 535 aaPredicted RBP11.98□□□□□ -0.49
TOP3B-212ENST00000456075 PDE4DQ08499 809 aa11.98□□□□□ -0.49
TOP3B-212ENST00000456075 COL9A3Q14050 684 aaPredicted RBP11.98□□□□□ -0.49
TOP3B-212ENST00000456075 RNF180Q86T96 592 aa11.98□□□□□ -0.49
TOP3B-212ENST00000456075 CCDC82Q8N4S0 544 aa11.98□□□□□ -0.49
TOP3B-212ENST00000456075 DNERQ8NFT8 737 aa11.98□□□□□ -0.49
TOP3B-212ENST00000456075 BRF1Q92994 677 aa11.98□□□□□ -0.49
TOP3B-212ENST00000456075 MTMR8Q96EF0 704 aa11.98□□□□□ -0.49
TOP3B-212ENST00000456075 SPC25Q9HBM1 224 aa11.98□□□□□ -0.49
TOP3B-212ENST00000456075 LOC102724159A0A0B4J2E5 919 aa11.97□□□□□ -0.49
TOP3B-212ENST00000456075 CCDC196A0A1B0GTZ2 297 aa11.97□□□□□ -0.49
TOP3B-212ENST00000456075 DNM1LO00429 736 aa11.97□□□□□ -0.49
TOP3B-212ENST00000456075 CYTH3O43739 400 aa11.97□□□□□ -0.49
TOP3B-212ENST00000456075 PLEKHA8P1O95397 391 aa11.97□□□□□ -0.49
TOP3B-212ENST00000456075 PWP2Q15269 919 aaKnown RBP11.97□□□□□ -0.49
TOP3B-212ENST00000456075 CCDC144BQ3MJ40 725 aa11.97□□□□□ -0.49
TOP3B-212ENST00000456075 RUFY3Q7L099 469 aa11.97□□□□□ -0.49
TOP3B-212ENST00000456075 EEPD1Q7L9B9 569 aa11.97□□□□□ -0.49
TOP3B-212ENST00000456075 CMTR1Q8N1G2 835 aaKnown RBP11.97□□□□□ -0.49
TOP3B-212ENST00000456075 DIS3LQ8TF46 1054 aaKnown RBP11.97□□□□□ -0.49
TOP3B-212ENST00000456075 FGD4Q96M96 766 aa11.97□□□□□ -0.49
TOP3B-212ENST00000456075 PURBQ96QR8 312 aaKnown RBP11.97□□□□□ -0.49
TOP3B-212ENST00000456075 GCOM1H8Y6P7 765 aaPredicted RBP11.96□□□□□ -0.49
TOP3B-212ENST00000456075 PPP1R11O60927 126 aaPredicted RBP11.96□□□□□ -0.49
TOP3B-212ENST00000456075 POLR2MP0CAP2 368 aa11.96□□□□□ -0.49
TOP3B-212ENST00000456075 METAP2P50579 478 aaKnown RBP eCLIP11.96□□□□□ -0.49
TOP3B-212ENST00000456075 RCAN1P53805 252 aa11.96□□□□□ -0.49
TOP3B-212ENST00000456075 TNFAIP2Q03169 654 aa11.96□□□□□ -0.49
TOP3B-212ENST00000456075 APOBRQ0VD83 1088 aa11.96□□□□□ -0.49
TOP3B-212ENST00000456075 PPP2R5BQ15173 497 aa11.96□□□□□ -0.49
TOP3B-212ENST00000456075 GJC2Q5T442 439 aaPredicted RBP11.96□□□□□ -0.49
TOP3B-212ENST00000456075 ARHGEF16Q5VV41 709 aa11.96□□□□□ -0.49
TOP3B-212ENST00000456075 TMTC3Q6ZXV5 915 aa11.96□□□□□ -0.49
TOP3B-212ENST00000456075 UBE2Q1Q7Z7E8 422 aa11.96□□□□□ -0.49
TOP3B-212ENST00000456075 FBXO16Q8IX29 292 aaPredicted RBP11.96□□□□□ -0.49
TOP3B-212ENST00000456075 SRBD1Q8N5C6 995 aaKnown RBP11.96□□□□□ -0.49
TOP3B-212ENST00000456075 NSUN6Q8TEA1 469 aaKnown RBP11.96□□□□□ -0.49
TOP3B-212ENST00000456075 CUL5Q93034 780 aa11.96□□□□□ -0.49
TOP3B-212ENST00000456075 RMDN3Q96TC7 470 aa11.96□□□□□ -0.49
TOP3B-212ENST00000456075 VTA1Q9NP79 307 aa11.96□□□□□ -0.49
TOP3B-212ENST00000456075 MAP3K20Q9NYL2 800 aaKnown RBP11.96□□□□□ -0.49
TOP3B-212ENST00000456075 BRPF3Q9ULD4 1205 aa11.96□□□□□ -0.49
TOP3B-212ENST00000456075 NR2E3Q9Y5X4 410 aa11.96□□□□□ -0.49
TOP3B-212ENST00000456075 EVI5O60447 810 aa11.95□□□□□ -0.5
TOP3B-212ENST00000456075 DUSP11O75319 330 aaKnown RBP11.95□□□□□ -0.5
TOP3B-212ENST00000456075 PGK1P00558 417 aa11.95□□□□□ -0.5
TOP3B-212ENST00000456075 C6orf222P0C671 652 aaPredicted RBP11.95□□□□□ -0.5
TOP3B-212ENST00000456075 HEATR3Q7Z4Q2 680 aa11.95□□□□□ -0.5
TOP3B-212ENST00000456075 SAMD3Q8N6K7 520 aa11.95□□□□□ -0.5
TOP3B-212ENST00000456075 SYTL5Q8TDW5 730 aaPredicted RBP11.95□□□□□ -0.5
TOP3B-212ENST00000456075 UPF3BQ9BZI7 483 aaKnown RBP11.95□□□□□ -0.5
TOP3B-212ENST00000456075 TM6SF1Q9BZW5 370 aa11.95□□□□□ -0.5
TOP3B-212ENST00000456075 SENP6Q9GZR1 1112 aaPredicted RBP11.95□□□□□ -0.5
TOP3B-212ENST00000456075 AP5M1Q9H0R1 490 aa11.95□□□□□ -0.5
TOP3B-212ENST00000456075 ZSWIM6Q9HCJ5 1215 aa11.95□□□□□ -0.5
TOP3B-212ENST00000456075 MYH6P13533 1939 aa11.95□□□□□ -0.5
TOP3B-212ENST00000456075 PDE4DIPQ5VU43 2346 aa11.94□□□□□ -0.5
TOP3B-212ENST00000456075 ASTN1O14525 1302 aa11.94□□□□□ -0.5
TOP3B-212ENST00000456075 SYNRGQ9UMZ2 1314 aa11.94□□□□□ -0.5
TOP3B-212ENST00000456075 EIF2AK2P19525 551 aaKnown RBP11.94□□□□□ -0.5
TOP3B-212ENST00000456075 HOXA13P31271 388 aaPredicted RBP11.94□□□□□ -0.5
TOP3B-212ENST00000456075 ADCYAP1R1P41586 468 aa11.94□□□□□ -0.5
TOP3B-212ENST00000456075 ANAPC15P60006 121 aa11.94□□□□□ -0.5
TOP3B-212ENST00000456075 AKAP17AQ02040 695 aaKnown RBP11.94□□□□□ -0.5
TOP3B-212ENST00000456075 LRRC41Q15345 812 aa11.94□□□□□ -0.5
TOP3B-212ENST00000456075 SLC35G1Q2M3R5 365 aa11.94□□□□□ -0.5
TOP3B-212ENST00000456075 IQSEC1Q6DN90 963 aa11.94□□□□□ -0.5
TOP3B-212ENST00000456075 FCHSD1Q86WN1 690 aa11.94□□□□□ -0.5
TOP3B-212ENST00000456075 SMARCC2Q8TAQ2 1214 aa11.94□□□□□ -0.5
TOP3B-212ENST00000456075 TBC1D5Q92609 795 aa11.94□□□□□ -0.5
TOP3B-212ENST00000456075 LENG1Q96BZ8 264 aaPredicted RBP11.94□□□□□ -0.5
TOP3B-212ENST00000456075 TAAR1Q96RJ0 339 aa11.94□□□□□ -0.5
TOP3B-212ENST00000456075 IWS1Q96ST2 819 aa11.94□□□□□ -0.5
TOP3B-212ENST00000456075 PDRG1Q9NUG6 133 aa11.94□□□□□ -0.5
TOP3B-212ENST00000456075 DDX49Q9Y6V7 483 aaKnown RBP11.94□□□□□ -0.5
TOP3B-212ENST00000456075 hCG_1642624A0A1W2PR95 340 aa11.93□□□□□ -0.5
TOP3B-212ENST00000456075 HSD17B4P51659 736 aa11.93□□□□□ -0.5
TOP3B-212ENST00000456075 STXBP2Q15833 593 aa11.93□□□□□ -0.5
TOP3B-212ENST00000456075 GNASQ5JWF2 1037 aa11.93□□□□□ -0.5
TOP3B-212ENST00000456075 PRPF38BQ5VTL8 546 aaKnown RBP11.93□□□□□ -0.5
TOP3B-212ENST00000456075 FBXL16Q8N461 479 aa11.93□□□□□ -0.5
TOP3B-212ENST00000456075 PCSK9Q8NBP7 692 aaKnown RBP11.93□□□□□ -0.5
TOP3B-212ENST00000456075 MORC4Q8TE76 937 aa11.93□□□□□ -0.5
TOP3B-212ENST00000456075 SCFD2Q8WU76 684 aa11.93□□□□□ -0.5
TOP3B-212ENST00000456075 WDR11Q9BZH6 1224 aa11.93□□□□□ -0.5
TOP3B-212ENST00000456075 KATNBL1Q9H079 304 aa11.93□□□□□ -0.5
TOP3B-212ENST00000456075 PXMP2Q9NR77 195 aa11.93□□□□□ -0.5
TOP3B-212ENST00000456075 SMCHD1A6NHR9 2005 aa11.93□□□□□ -0.5
TOP3B-212ENST00000456075 DNAH12Q6ZR08 3092 aa11.92□□□□□ -0.5
TOP3B-212ENST00000456075 CPLX1O14810 134 aa11.92□□□□□ -0.5
TOP3B-212ENST00000456075 DYNC1LI2O43237 492 aaPredicted RBP11.92□□□□□ -0.5
TOP3B-212ENST00000456075 ZEB2O60315 1214 aa11.92□□□□□ -0.5
TOP3B-212ENST00000456075 COL6A1P12109 1028 aa11.92□□□□□ -0.5
TOP3B-212ENST00000456075 MYCLP12524 364 aaPredicted RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms