RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 CYTH3O43739 400 aa20.14■□□□□ 0.81
USP39-208ENST00000455732 DUSP11O75319 330 aaKnown RBP20.14■□□□□ 0.81
USP39-208ENST00000455732 MYCNP04198 464 aaPredicted RBP20.14■□□□□ 0.81
USP39-208ENST00000455732 SMARCA1P28370 1054 aa20.14■□□□□ 0.81
USP39-208ENST00000455732 ADCYAP1R1P41586 468 aa20.14■□□□□ 0.81
USP39-208ENST00000455732 ATN1P54259 1190 aaPredicted RBP20.14■□□□□ 0.81
USP39-208ENST00000455732 SNX17Q15036 470 aa20.14■□□□□ 0.81
USP39-208ENST00000455732 CCDC144BQ3MJ40 725 aa20.14■□□□□ 0.81
USP39-208ENST00000455732 SLC30A10Q6XR72 485 aa20.14■□□□□ 0.81
USP39-208ENST00000455732 SLC39A5Q6ZMH5 540 aa20.14■□□□□ 0.81
USP39-208ENST00000455732 RNF207Q6ZRF8 634 aa20.14■□□□□ 0.81
USP39-208ENST00000455732 RNF180Q86T96 592 aa20.14■□□□□ 0.81
USP39-208ENST00000455732 PURBQ96QR8 312 aaKnown RBP20.14■□□□□ 0.81
USP39-208ENST00000455732 LZTS2Q9BRK4 669 aa20.14■□□□□ 0.81
USP39-208ENST00000455732 MYL10Q9BUA6 226 aa20.14■□□□□ 0.81
USP39-208ENST00000455732 SPZ1Q9BXG8 430 aa20.14■□□□□ 0.81
USP39-208ENST00000455732 AMNQ9BXJ7 453 aa20.14■□□□□ 0.81
USP39-208ENST00000455732 LRRC2Q9BYS8 371 aa20.14■□□□□ 0.81
USP39-208ENST00000455732 VAT1LQ9HCJ6 419 aa20.14■□□□□ 0.81
USP39-208ENST00000455732 ADD3Q9UEY8 706 aaKnown RBP20.14■□□□□ 0.81
USP39-208ENST00000455732 PHF24Q9UPV7 400 aa20.14■□□□□ 0.81
USP39-208ENST00000455732 MRPL11Q9Y3B7 192 aaKnown RBP20.14■□□□□ 0.81
USP39-208ENST00000455732 SLC12A7Q9Y666 1083 aa20.14■□□□□ 0.81
USP39-208ENST00000455732 DDX49Q9Y6V7 483 aaKnown RBP20.14■□□□□ 0.81
USP39-208ENST00000455732 LAMA3Q16787 3333 aa20.14■□□□□ 0.81
USP39-208ENST00000455732 PTPDC1A2A3K4 754 aa20.13■□□□□ 0.81
USP39-208ENST00000455732 SYN1P17600 705 aa20.13■□□□□ 0.81
USP39-208ENST00000455732 GNAQP50148 359 aa20.13■□□□□ 0.81
USP39-208ENST00000455732 RPS6P62753 249 aaKnown RBP20.13■□□□□ 0.81
USP39-208ENST00000455732 TRAF1Q13077 416 aa20.13■□□□□ 0.81
USP39-208ENST00000455732 KLHDC9Q8NEP7 349 aa20.13■□□□□ 0.81
USP39-208ENST00000455732 GDF15Q99988 308 aa20.13■□□□□ 0.81
USP39-208ENST00000455732 LTBP2Q14767 1821 aa20.12■□□□□ 0.81
USP39-208ENST00000455732 PPP1R11O60927 126 aaPredicted RBP20.12■□□□□ 0.81
USP39-208ENST00000455732 GHRHRQ02643 423 aa20.12■□□□□ 0.81
USP39-208ENST00000455732 CCSAPQ6IQ19 270 aaPredicted RBP20.12■□□□□ 0.81
USP39-208ENST00000455732 MCF2L2Q86YR7 1114 aa20.12■□□□□ 0.81
USP39-208ENST00000455732 FERMT2Q96AC1 680 aa20.12■□□□□ 0.81
USP39-208ENST00000455732 USP26Q9BXU7 913 aa20.12■□□□□ 0.81
USP39-208ENST00000455732 PNMA6FA0A0J9YX94 578 aa20.11■□□□□ 0.81
USP39-208ENST00000455732 ALDH5A1P51649 535 aaPredicted RBP20.11■□□□□ 0.81
USP39-208ENST00000455732 RCAN1P53805 252 aa20.11■□□□□ 0.81
USP39-208ENST00000455732 RTP1P59025 263 aa20.11■□□□□ 0.81
USP39-208ENST00000455732 C1orf53Q5VUE5 145 aa20.11■□□□□ 0.81
USP39-208ENST00000455732 APOA5Q6Q788 366 aa20.11■□□□□ 0.81
USP39-208ENST00000455732 FBXL16Q8N461 479 aa20.11■□□□□ 0.81
USP39-208ENST00000455732 DNERQ8NFT8 737 aa20.11■□□□□ 0.81
USP39-208ENST00000455732 TCEANC2Q96MN5 208 aa20.11■□□□□ 0.81
USP39-208ENST00000455732 JAKMIP1Q96N16 626 aaKnown RBP20.11■□□□□ 0.81
USP39-208ENST00000455732 PIGSQ96S52 555 aa20.11■□□□□ 0.81
USP39-208ENST00000455732 TSEN34Q9BSV6 310 aaKnown RBP20.11■□□□□ 0.81
USP39-208ENST00000455732 UPF3AQ9H1J1 476 aaKnown RBP20.11■□□□□ 0.81
USP39-208ENST00000455732 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.1■□□□□ 0.81
USP39-208ENST00000455732 A0A1W2PPC1 479 aa20.1■□□□□ 0.81
USP39-208ENST00000455732 MYADML2A6NDP7 307 aa20.1■□□□□ 0.81
USP39-208ENST00000455732 CALML3P27482 149 aa20.1■□□□□ 0.81
USP39-208ENST00000455732 PSMA5P28066 241 aa20.1■□□□□ 0.81
USP39-208ENST00000455732 CST5P28325 142 aaPredicted RBP20.1■□□□□ 0.81
USP39-208ENST00000455732 BMP8BP34820 402 aa20.1■□□□□ 0.81
USP39-208ENST00000455732 GJA9P57773 515 aa20.1■□□□□ 0.81
USP39-208ENST00000455732 NKX3-2P78367 333 aa20.1■□□□□ 0.81
USP39-208ENST00000455732 IRX5P78411 483 aaPredicted RBP20.1■□□□□ 0.81
USP39-208ENST00000455732 TAPT1Q6NXT6 567 aa20.1■□□□□ 0.81
USP39-208ENST00000455732 BLOC1S2Q6QNY1 142 aa20.1■□□□□ 0.81
USP39-208ENST00000455732 HOMER1Q86YM7 354 aa20.1■□□□□ 0.81
USP39-208ENST00000455732 SAMD3Q8N6K7 520 aa20.1■□□□□ 0.81
USP39-208ENST00000455732 PCDHA1Q9Y5I3 950 aa20.1■□□□□ 0.81
USP39-208ENST00000455732 A0A1W2PQ45 241 aaPredicted RBP20.09■□□□□ 0.81
USP39-208ENST00000455732 A0A1W2PQY0 241 aa20.09■□□□□ 0.81
USP39-208ENST00000455732 OPLAHO14841 1288 aa20.09■□□□□ 0.81
USP39-208ENST00000455732 CTAGE5O15320 804 aa20.09■□□□□ 0.81
USP39-208ENST00000455732 PLEKHA8P1O95397 391 aa20.09■□□□□ 0.81
USP39-208ENST00000455732 EDNRBP24530 442 aa20.09■□□□□ 0.81
USP39-208ENST00000455732 MAGEA10P43363 369 aaPredicted RBP20.09■□□□□ 0.81
USP39-208ENST00000455732 SYNE3Q6ZMZ3 975 aa20.09■□□□□ 0.81
USP39-208ENST00000455732 TMTC3Q6ZXV5 915 aa20.09■□□□□ 0.81
USP39-208ENST00000455732 MICU3Q86XE3 530 aa20.09■□□□□ 0.81
USP39-208ENST00000455732 FANCBQ8NB91 859 aa20.09■□□□□ 0.81
USP39-208ENST00000455732 VTA1Q9NP79 307 aa20.09■□□□□ 0.81
USP39-208ENST00000455732 MAP3K20Q9NYL2 800 aaKnown RBP20.09■□□□□ 0.81
USP39-208ENST00000455732 GNEQ9Y223 722 aaKnown RBP20.09■□□□□ 0.81
USP39-208ENST00000455732 KIAA1217Q5T5P2 1943 aa20.09■□□□□ 0.81
USP39-208ENST00000455732 RXRAP19793 462 aa20.08■□□□□ 0.81
USP39-208ENST00000455732 HSD17B4P51659 736 aa20.08■□□□□ 0.81
USP39-208ENST00000455732 ACLYP53396 1101 aa20.08■□□□□ 0.81
USP39-208ENST00000455732 TNFAIP2Q03169 654 aa20.08■□□□□ 0.81
USP39-208ENST00000455732 KCNA10Q16322 511 aa20.08■□□□□ 0.81
USP39-208ENST00000455732 EEPD1Q7L9B9 569 aa20.08■□□□□ 0.81
USP39-208ENST00000455732 FBXO16Q8IX29 292 aaPredicted RBP20.08■□□□□ 0.81
USP39-208ENST00000455732 SRBD1Q8N5C6 995 aaKnown RBP20.08■□□□□ 0.81
USP39-208ENST00000455732 SYTL5Q8TDW5 730 aaPredicted RBP20.08■□□□□ 0.81
USP39-208ENST00000455732 MPHOSPH6Q99547 160 aaKnown RBP20.08■□□□□ 0.81
USP39-208ENST00000455732 AGXT2Q9BYV1 514 aa20.08■□□□□ 0.81
USP39-208ENST00000455732 PDGFCQ9NRA1 345 aa20.08■□□□□ 0.81
USP39-208ENST00000455732 RBM28Q9NW13 759 aaKnown RBP20.08■□□□□ 0.81
USP39-208ENST00000455732 ATP11BQ9Y2G3 1177 aa20.08■□□□□ 0.81
USP39-208ENST00000455732 MOXD2PA6NHM9 499 aa20.07■□□□□ 0.8
USP39-208ENST00000455732 ZBTB43O43298 467 aa20.07■□□□□ 0.8
USP39-208ENST00000455732 EIF5BO60841 1220 aaKnown RBP20.07■□□□□ 0.8
USP39-208ENST00000455732 C6orf222P0C671 652 aaPredicted RBP20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms