RNA–Protein interactions for RNA: ENST00000453963.5

SEC16A-207, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 4,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-207ENST00000453963 MMP1P03956 469 aa13.17□□□□□ -0.3
SEC16A-207ENST00000453963 NNTQ13423 1086 aa13.17□□□□□ -0.3
SEC16A-207ENST00000453963 CC2D1AQ6P1N0 951 aaPredicted RBP13.17□□□□□ -0.3
SEC16A-207ENST00000453963 CCT6BQ92526 530 aa13.17□□□□□ -0.3
SEC16A-207ENST00000453963 ATP2A3Q93084 1043 aa13.17□□□□□ -0.3
SEC16A-207ENST00000453963 SRPRBQ9Y5M8 271 aaKnown RBP13.17□□□□□ -0.3
SEC16A-207ENST00000453963 SEMA3EO15041 775 aa13.17□□□□□ -0.3
SEC16A-207ENST00000453963 MYCLP12524 364 aaPredicted RBP13.17□□□□□ -0.3
SEC16A-207ENST00000453963 CRKLP46109 303 aaKnown RBP13.17□□□□□ -0.3
SEC16A-207ENST00000453963 ARID5BQ14865 1188 aa13.17□□□□□ -0.3
SEC16A-207ENST00000453963 PROSER3Q2NL68 480 aa13.17□□□□□ -0.3
SEC16A-207ENST00000453963 TRIM68Q6AZZ1 485 aa13.17□□□□□ -0.3
SEC16A-207ENST00000453963 RNF34Q969K3 372 aa13.17□□□□□ -0.3
SEC16A-207ENST00000453963 HINFPQ9BQA5 517 aa13.17□□□□□ -0.3
SEC16A-207ENST00000453963 BPIFA3Q9BQP9 254 aa13.17□□□□□ -0.3
SEC16A-207ENST00000453963 ERBB3P21860 1342 aa13.17□□□□□ -0.3
SEC16A-207ENST00000453963 HOXA7P31268 230 aaPredicted RBP13.17□□□□□ -0.3
SEC16A-207ENST00000453963 EXOC3L4Q17RC7 722 aa13.17□□□□□ -0.3
SEC16A-207ENST00000453963 GEN1Q17RS7 908 aa13.17□□□□□ -0.3
SEC16A-207ENST00000453963 AP1ARQ63HQ0 302 aa13.17□□□□□ -0.3
SEC16A-207ENST00000453963 LARSQ9P2J5 1176 aaKnown RBP13.17□□□□□ -0.3
SEC16A-207ENST00000453963 ABCC12Q96J65 1359 aa13.17□□□□□ -0.3
SEC16A-207ENST00000453963 PRDM15P57071 1507 aaPredicted RBP13.17□□□□□ -0.3
SEC16A-207ENST00000453963 LRRD1A4D1F6 860 aa13.16□□□□□ -0.3
SEC16A-207ENST00000453963 DAPK3O43293 454 aa13.16□□□□□ -0.3
SEC16A-207ENST00000453963 CFBP00751 764 aa13.16□□□□□ -0.3
SEC16A-207ENST00000453963 TNFAIP1Q13829 316 aa13.16□□□□□ -0.3
SEC16A-207ENST00000453963 SH2D4BQ5SQS7 431 aa13.16□□□□□ -0.3
SEC16A-207ENST00000453963 CEP120Q8N960 986 aa13.16□□□□□ -0.3
SEC16A-207ENST00000453963 GREM2Q9H772 168 aa13.16□□□□□ -0.3
SEC16A-207ENST00000453963 UGGT1Q9NYU2 1555 aa13.16□□□□□ -0.3
SEC16A-207ENST00000453963 KLRF2D3W0D1 207 aa13.16□□□□□ -0.3
SEC16A-207ENST00000453963 PGRMC1O00264 195 aaKnown RBP13.16□□□□□ -0.3
SEC16A-207ENST00000453963 PRKG1Q13976 671 aa13.16□□□□□ -0.3
SEC16A-207ENST00000453963 PALM2Q8IXS6 379 aa13.16□□□□□ -0.3
SEC16A-207ENST00000453963 SLFN12Q8IYM2 578 aa13.16□□□□□ -0.3
SEC16A-207ENST00000453963 NOD1Q9Y239 953 aa13.16□□□□□ -0.3
SEC16A-207ENST00000453963 DAAM1Q9Y4D1 1078 aa13.16□□□□□ -0.3
SEC16A-207ENST00000453963 KDM6BO15054 1643 aa13.16□□□□□ -0.3
SEC16A-207ENST00000453963 PRR36Q9H6K5 1346 aa13.16□□□□□ -0.3
SEC16A-207ENST00000453963 CHRNDQ07001 517 aa13.16□□□□□ -0.3
SEC16A-207ENST00000453963 AZI2Q9H6S1 392 aa13.16□□□□□ -0.3
SEC16A-207ENST00000453963 COL4A3BPQ9Y5P4 624 aa13.16□□□□□ -0.3
SEC16A-207ENST00000453963 MFAP3LO75121 409 aa13.16□□□□□ -0.3
SEC16A-207ENST00000453963 LMNB1P20700 586 aa13.16□□□□□ -0.3
SEC16A-207ENST00000453963 MAN1A1P33908 653 aa13.16□□□□□ -0.3
SEC16A-207ENST00000453963 KMT5BQ4FZB7 885 aa13.16□□□□□ -0.3
SEC16A-207ENST00000453963 SMYD4Q8IYR2 804 aaPredicted RBP13.16□□□□□ -0.3
SEC16A-207ENST00000453963 SDR42E1Q8WUS8 393 aa13.16□□□□□ -0.3
SEC16A-207ENST00000453963 PBKQ96KB5 322 aa13.16□□□□□ -0.3
SEC16A-207ENST00000453963 THAP9Q9H5L6 903 aa13.16□□□□□ -0.3
SEC16A-207ENST00000453963 GPHNQ9NQX3 736 aaPredicted RBP13.16□□□□□ -0.3
SEC16A-207ENST00000453963 ZDHHC9Q9Y397 364 aa13.16□□□□□ -0.3
SEC16A-207ENST00000453963 CD19P15391 556 aa13.15□□□□□ -0.3
SEC16A-207ENST00000453963 IL9RQ01113 521 aa13.15□□□□□ -0.3
SEC16A-207ENST00000453963 PTPN21Q16825 1174 aa13.15□□□□□ -0.3
SEC16A-207ENST00000453963 USH1GQ495M9 461 aa13.15□□□□□ -0.3
SEC16A-207ENST00000453963 LRCH2Q5VUJ6 765 aa13.15□□□□□ -0.3
SEC16A-207ENST00000453963 MMS22LQ6ZRQ5 1243 aa13.15□□□□□ -0.3
SEC16A-207ENST00000453963 CNKSR1Q969H4 720 aa13.15□□□□□ -0.3
SEC16A-207ENST00000453963 IFNB1P01574 187 aa13.15□□□□□ -0.3
SEC16A-207ENST00000453963 ATF2P15336 505 aa13.15□□□□□ -0.3
SEC16A-207ENST00000453963 NR1D1P20393 614 aa13.15□□□□□ -0.3
SEC16A-207ENST00000453963 C2orf54Q08AI8 447 aa13.15□□□□□ -0.3
SEC16A-207ENST00000453963 MAEAQ7L5Y9 396 aa13.15□□□□□ -0.3
SEC16A-207ENST00000453963 CHURC1Q8WUH1 139 aa13.15□□□□□ -0.3
SEC16A-207ENST00000453963 SPATS2LQ9NUQ6 558 aaKnown RBP13.15□□□□□ -0.3
SEC16A-207ENST00000453963 SAMD9LQ8IVG5 1584 aa13.15□□□□□ -0.3
SEC16A-207ENST00000453963 CYP2J2P51589 502 aa13.15□□□□□ -0.3
SEC16A-207ENST00000453963 RNASELQ05823 741 aaKnown RBP13.15□□□□□ -0.3
SEC16A-207ENST00000453963 RDH13Q8NBN7 331 aa13.15□□□□□ -0.3
SEC16A-207ENST00000453963 UHMK1Q8TAS1 419 aaKnown RBP13.15□□□□□ -0.3
SEC16A-207ENST00000453963 LRRC8CQ8TDW0 803 aa13.15□□□□□ -0.3
SEC16A-207ENST00000453963 SPZ1Q9BXG8 430 aa13.15□□□□□ -0.3
SEC16A-207ENST00000453963 QTRT2Q9H974 415 aaKnown RBP13.15□□□□□ -0.3
SEC16A-207ENST00000453963 RAB20Q9NX57 234 aa13.15□□□□□ -0.3
SEC16A-207ENST00000453963 HMGB1P1B2RPK0 211 aaPredicted RBP13.15□□□□□ -0.3
SEC16A-207ENST00000453963 SH2B2O14492 632 aaPredicted RBP13.15□□□□□ -0.3
SEC16A-207ENST00000453963 CTNND1O60716 968 aaKnown RBP13.15□□□□□ -0.3
SEC16A-207ENST00000453963 CCNE1P24864 410 aa13.15□□□□□ -0.3
SEC16A-207ENST00000453963 FKBP3Q00688 224 aaKnown RBP13.15□□□□□ -0.3
SEC16A-207ENST00000453963 KIAA0825Q8IV33 1275 aa13.15□□□□□ -0.3
SEC16A-207ENST00000453963 CTAGE3PQ8IX95 158 aa13.15□□□□□ -0.3
SEC16A-207ENST00000453963 GRAMD1CQ8IYS0 662 aa13.15□□□□□ -0.3
SEC16A-207ENST00000453963 PGBD1Q96JS3 809 aa13.15□□□□□ -0.3
SEC16A-207ENST00000453963 TRIM6Q9C030 488 aaPredicted RBP13.15□□□□□ -0.3
SEC16A-207ENST00000453963 GINS2Q9Y248 185 aa13.15□□□□□ -0.3
SEC16A-207ENST00000453963 BCS1LQ9Y276 419 aa13.15□□□□□ -0.3
SEC16A-207ENST00000453963 GIPC1O14908 333 aa13.14□□□□□ -0.31
SEC16A-207ENST00000453963 CRCPO75575 148 aa13.14□□□□□ -0.31
SEC16A-207ENST00000453963 HSPA6P17066 643 aa13.14□□□□□ -0.31
SEC16A-207ENST00000453963 TADA2BQ86TJ2 420 aa13.14□□□□□ -0.31
SEC16A-207ENST00000453963 TPH2Q8IWU9 490 aa13.14□□□□□ -0.31
SEC16A-207ENST00000453963 TCP11Q8WWU5 503 aa13.14□□□□□ -0.31
SEC16A-207ENST00000453963 GPKOWQ92917 476 aaPredicted RBP eCLIP13.14□□□□□ -0.31
SEC16A-207ENST00000453963 MAGOHBQ96A72 148 aaKnown RBP13.14□□□□□ -0.31
SEC16A-207ENST00000453963 NHEJ1Q9H9Q4 299 aaPredicted RBP13.14□□□□□ -0.31
SEC16A-207ENST00000453963 SH3BP5O60239 455 aa13.14□□□□□ -0.31
SEC16A-207ENST00000453963 LIFRP42702 1097 aa13.14□□□□□ -0.31
SEC16A-207ENST00000453963 PTPROQ16827 1216 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms