RNA–Protein interactions for RNA: ENST00000453260.6

TNFRSF25-207, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 2

Gene TNFRSF25, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-207ENST00000453260 KDM4AO75164 1064 aa21.56■■□□□ 1.04
TNFRSF25-207ENST00000453260 CALML3P27482 149 aa21.56■■□□□ 1.04
TNFRSF25-207ENST00000453260 ITGA7Q13683 1181 aa21.56■■□□□ 1.04
TNFRSF25-207ENST00000453260 DUSP28Q4G0W2 176 aa21.56■■□□□ 1.04
TNFRSF25-207ENST00000453260 FAM126BQ8IXS8 530 aa21.56■■□□□ 1.04
TNFRSF25-207ENST00000453260 PURBQ96QR8 312 aaKnown RBP21.56■■□□□ 1.04
TNFRSF25-207ENST00000453260 KAT14Q9H8E8 782 aa21.56■■□□□ 1.04
TNFRSF25-207ENST00000453260 NEDD4P46934 1319 aa21.55■■□□□ 1.04
TNFRSF25-207ENST00000453260 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.55■■□□□ 1.04
TNFRSF25-207ENST00000453260 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.55■■□□□ 1.04
TNFRSF25-207ENST00000453260 SLC43A3Q8NBI5 491 aa21.55■■□□□ 1.04
TNFRSF25-207ENST00000453260 PNMA1Q8ND90 353 aa21.55■■□□□ 1.04
TNFRSF25-207ENST00000453260 CLEC4DQ8WXI8 215 aa21.55■■□□□ 1.04
TNFRSF25-207ENST00000453260 WDR11Q9BZH6 1224 aa21.55■■□□□ 1.04
TNFRSF25-207ENST00000453260 DDX49Q9Y6V7 483 aaKnown RBP21.55■■□□□ 1.04
TNFRSF25-207ENST00000453260 TMEM265A0A087WTH1 108 aa21.54■■□□□ 1.04
TNFRSF25-207ENST00000453260 CD4P01730 458 aa21.54■■□□□ 1.04
TNFRSF25-207ENST00000453260 PDE4DQ08499 809 aa21.54■■□□□ 1.04
TNFRSF25-207ENST00000453260 BRDTQ58F21 947 aaPredicted RBP21.54■■□□□ 1.04
TNFRSF25-207ENST00000453260 DNERQ8NFT8 737 aa21.54■■□□□ 1.04
TNFRSF25-207ENST00000453260 ANKS1AQ92625 1134 aa21.54■■□□□ 1.04
TNFRSF25-207ENST00000453260 ZSCAN10Q96SZ4 725 aaPredicted RBP21.54■■□□□ 1.04
TNFRSF25-207ENST00000453260 CDX2Q99626 313 aaPredicted RBP21.54■■□□□ 1.04
TNFRSF25-207ENST00000453260 KRT23Q9C075 422 aa21.54■■□□□ 1.04
TNFRSF25-207ENST00000453260 MAF1Q9H063 256 aa21.54■■□□□ 1.04
TNFRSF25-207ENST00000453260 CNNM2Q9H8M5 875 aa21.54■■□□□ 1.04
TNFRSF25-207ENST00000453260 LCTP09848 1927 aa21.54■■□□□ 1.04
TNFRSF25-207ENST00000453260 GOLGA8HP0CJ92 632 aa21.53■■□□□ 1.04
TNFRSF25-207ENST00000453260 RPS6P62753 249 aaKnown RBP21.53■■□□□ 1.04
TNFRSF25-207ENST00000453260 RGS22Q8NE09 1264 aa21.53■■□□□ 1.04
TNFRSF25-207ENST00000453260 PPP1R12CQ9BZL4 782 aa21.53■■□□□ 1.04
TNFRSF25-207ENST00000453260 POLR3EQ9NVU0 708 aa21.53■■□□□ 1.04
TNFRSF25-207ENST00000453260 LAMA4Q16363 1823 aa21.52■■□□□ 1.04
TNFRSF25-207ENST00000453260 LRRC37A2A6NM11 1700 aa21.52■■□□□ 1.04
TNFRSF25-207ENST00000453260 RBM47A0AV96 593 aaKnown RBP21.52■■□□□ 1.04
TNFRSF25-207ENST00000453260 B4E1Z4 1266 aa21.52■■□□□ 1.04
TNFRSF25-207ENST00000453260 NKRFO15226 690 aaKnown RBP eCLIP21.52■■□□□ 1.04
TNFRSF25-207ENST00000453260 CSF2RAP15509 400 aa21.52■■□□□ 1.04
TNFRSF25-207ENST00000453260 CPT1AP50416 773 aa21.52■■□□□ 1.04
TNFRSF25-207ENST00000453260 SLC30A10Q6XR72 485 aa21.52■■□□□ 1.04
TNFRSF25-207ENST00000453260 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.52■■□□□ 1.04
TNFRSF25-207ENST00000453260 UBA5Q9GZZ9 404 aa21.52■■□□□ 1.04
TNFRSF25-207ENST00000453260 GPHNQ9NQX3 736 aaPredicted RBP21.52■■□□□ 1.04
TNFRSF25-207ENST00000453260 ZSWIM5Q9P217 1185 aa21.52■■□□□ 1.04
TNFRSF25-207ENST00000453260 RAD50Q92878 1312 aa21.52■■□□□ 1.03
TNFRSF25-207ENST00000453260 USH1GQ495M9 461 aa21.51■■□□□ 1.03
TNFRSF25-207ENST00000453260 ASPRV1Q53RT3 343 aa21.51■■□□□ 1.03
TNFRSF25-207ENST00000453260 PSRC1Q6PGN9 363 aaPredicted RBP21.51■■□□□ 1.03
TNFRSF25-207ENST00000453260 UBAC1Q9BSL1 405 aa21.51■■□□□ 1.03
TNFRSF25-207ENST00000453260 HIPK3Q9H422 1215 aa21.51■■□□□ 1.03
TNFRSF25-207ENST00000453260 PARP1P09874 1014 aaKnown RBP21.5■■□□□ 1.03
TNFRSF25-207ENST00000453260 CYP2C18P33260 490 aa21.5■■□□□ 1.03
TNFRSF25-207ENST00000453260 PPP2R5BQ15173 497 aa21.5■■□□□ 1.03
TNFRSF25-207ENST00000453260 CDC37Q16543 378 aaPredicted RBP21.5■■□□□ 1.03
TNFRSF25-207ENST00000453260 TMEM240Q5SV17 173 aa21.5■■□□□ 1.03
TNFRSF25-207ENST00000453260 TMEM63BQ5T3F8 832 aa21.5■■□□□ 1.03
TNFRSF25-207ENST00000453260 ADGRF4Q8IZF3 695 aa21.5■■□□□ 1.03
TNFRSF25-207ENST00000453260 ENAHQ8N8S7 591 aaPredicted RBP21.5■■□□□ 1.03
TNFRSF25-207ENST00000453260 SCFD2Q8WU76 684 aa21.5■■□□□ 1.03
TNFRSF25-207ENST00000453260 MTIF3Q9H2K0 278 aaKnown RBP21.5■■□□□ 1.03
TNFRSF25-207ENST00000453260 TTYH1Q9H313 450 aaPredicted RBP21.5■■□□□ 1.03
TNFRSF25-207ENST00000453260 SUPT16HQ9Y5B9 1047 aaKnown RBP21.5■■□□□ 1.03
TNFRSF25-207ENST00000453260 ABCB11O95342 1321 aa21.5■■□□□ 1.03
TNFRSF25-207ENST00000453260 DHX16O60231 1041 aaKnown RBP21.49■■□□□ 1.03
TNFRSF25-207ENST00000453260 SUPT20HL2P0C7V6 817 aa21.49■■□□□ 1.03
TNFRSF25-207ENST00000453260 PTGS1P23219 599 aa21.49■■□□□ 1.03
TNFRSF25-207ENST00000453260 ZNF365Q70YC5 407 aa21.49■■□□□ 1.03
TNFRSF25-207ENST00000453260 C16orf59Q7L2K0 433 aa21.49■■□□□ 1.03
TNFRSF25-207ENST00000453260 MCF2L2Q86YR7 1114 aa21.49■■□□□ 1.03
TNFRSF25-207ENST00000453260 OR6J1Q8NGC5 347 aa21.49■■□□□ 1.03
TNFRSF25-207ENST00000453260 RUFY2Q8WXA3 655 aa21.49■■□□□ 1.03
TNFRSF25-207ENST00000453260 IL23AQ9NPF7 189 aa21.49■■□□□ 1.03
TNFRSF25-207ENST00000453260 GRIN2DO15399 1336 aa21.49■■□□□ 1.03
TNFRSF25-207ENST00000453260 TNKSO95271 1327 aa21.49■■□□□ 1.03
TNFRSF25-207ENST00000453260 MYH6P13533 1939 aa21.49■■□□□ 1.03
TNFRSF25-207ENST00000453260 MYO9BQ13459 2157 aa21.48■■□□□ 1.03
TNFRSF25-207ENST00000453260 KPNA6O60684 536 aa21.48■■□□□ 1.03
TNFRSF25-207ENST00000453260 MYL3P08590 195 aa21.48■■□□□ 1.03
TNFRSF25-207ENST00000453260 EDNRBP24530 442 aa21.48■■□□□ 1.03
TNFRSF25-207ENST00000453260 DNAJB2P25686 324 aa21.48■■□□□ 1.03
TNFRSF25-207ENST00000453260 PSMC6P62333 389 aa21.48■■□□□ 1.03
TNFRSF25-207ENST00000453260 TRDNQ13061 729 aa21.48■■□□□ 1.03
TNFRSF25-207ENST00000453260 IFIT1BQ5T764 474 aaKnown RBP21.48■■□□□ 1.03
TNFRSF25-207ENST00000453260 TRPV6Q9H1D0 765 aa21.48■■□□□ 1.03
TNFRSF25-207ENST00000453260 CPVLQ9H3G5 476 aa21.48■■□□□ 1.03
TNFRSF25-207ENST00000453260 UNC80Q8N2C7 3258 aa21.47■■□□□ 1.03
TNFRSF25-207ENST00000453260 FGBP02675 491 aa21.47■■□□□ 1.03
TNFRSF25-207ENST00000453260 ACRP10323 421 aa21.47■■□□□ 1.03
TNFRSF25-207ENST00000453260 TXNP10599 105 aaKnown RBP21.47■■□□□ 1.03
TNFRSF25-207ENST00000453260 PURAQ00577 322 aaKnown RBP21.47■■□□□ 1.03
TNFRSF25-207ENST00000453260 TTLL4Q14679 1199 aa21.47■■□□□ 1.03
TNFRSF25-207ENST00000453260 FBXO11Q86XK2 927 aa21.47■■□□□ 1.03
TNFRSF25-207ENST00000453260 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.47■■□□□ 1.03
TNFRSF25-207ENST00000453260 RPUSD2Q8IZ73 545 aaKnown RBP21.47■■□□□ 1.03
TNFRSF25-207ENST00000453260 MAFAQ8NHW3 353 aaPredicted RBP21.47■■□□□ 1.03
TNFRSF25-207ENST00000453260 NSUN6Q8TEA1 469 aaKnown RBP21.47■■□□□ 1.03
TNFRSF25-207ENST00000453260 MYLIPQ8WY64 445 aa21.47■■□□□ 1.03
TNFRSF25-207ENST00000453260 MTG1Q9BT17 334 aaPredicted RBP21.47■■□□□ 1.03
TNFRSF25-207ENST00000453260 ALDH8A1Q9H2A2 487 aaPredicted RBP21.47■■□□□ 1.03
TNFRSF25-207ENST00000453260 VAT1LQ9HCJ6 419 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms