RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 SMARCA5O60264 1052 aaPredicted RBP16.91■□□□□ 0.3
LYSMD3-202ENST00000453259 PLA2G5P39877 138 aa16.91■□□□□ 0.3
LYSMD3-202ENST00000453259 NOVP48745 357 aa16.91■□□□□ 0.3
LYSMD3-202ENST00000453259 PTPN11Q06124 597 aaPredicted RBP16.91■□□□□ 0.3
LYSMD3-202ENST00000453259 TMEM67Q5HYA8 995 aa16.91■□□□□ 0.3
LYSMD3-202ENST00000453259 KIAA1211Q6ZU35 1233 aa16.91■□□□□ 0.3
LYSMD3-202ENST00000453259 FBXO16Q8IX29 292 aaPredicted RBP16.91■□□□□ 0.3
LYSMD3-202ENST00000453259 MAF1Q9H063 256 aa16.91■□□□□ 0.3
LYSMD3-202ENST00000453259 TNKSO95271 1327 aa16.91■□□□□ 0.3
LYSMD3-202ENST00000453259 RBM47A0AV96 593 aaKnown RBP16.9■□□□□ 0.3
LYSMD3-202ENST00000453259 ZBBXA8MT70 800 aa16.9■□□□□ 0.3
LYSMD3-202ENST00000453259 B4DLN1 442 aa16.9■□□□□ 0.3
LYSMD3-202ENST00000453259 BMP1P13497 986 aa16.9■□□□□ 0.3
LYSMD3-202ENST00000453259 HOXD11P31277 338 aaPredicted RBP16.9■□□□□ 0.3
LYSMD3-202ENST00000453259 MRPL12P52815 198 aaKnown RBP16.9■□□□□ 0.3
LYSMD3-202ENST00000453259 PURAQ00577 322 aaKnown RBP16.9■□□□□ 0.3
LYSMD3-202ENST00000453259 NFRKBQ6P4R8 1299 aa16.9■□□□□ 0.3
LYSMD3-202ENST00000453259 BTNL9Q6UXG8 535 aa16.9■□□□□ 0.3
LYSMD3-202ENST00000453259 NSMFQ6X4W1 530 aa16.9■□□□□ 0.3
LYSMD3-202ENST00000453259 MTG1Q9BT17 334 aaPredicted RBP16.9■□□□□ 0.3
LYSMD3-202ENST00000453259 RANBP17Q9H2T7 1088 aaKnown RBP16.9■□□□□ 0.3
LYSMD3-202ENST00000453259 GPHNQ9NQX3 736 aaPredicted RBP16.9■□□□□ 0.3
LYSMD3-202ENST00000453259 PDGFCQ9NRA1 345 aa16.9■□□□□ 0.3
LYSMD3-202ENST00000453259 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.9■□□□□ 0.3
LYSMD3-202ENST00000453259 TRANK1O15050 2925 aa16.9■□□□□ 0.3
LYSMD3-202ENST00000453259 BAIAP3O94812 1187 aa16.89■□□□□ 0.29
LYSMD3-202ENST00000453259 ALDH5A1P51649 535 aaPredicted RBP16.89■□□□□ 0.29
LYSMD3-202ENST00000453259 PSMC6P62333 389 aa16.89■□□□□ 0.29
LYSMD3-202ENST00000453259 MUM1L1Q5H9M0 696 aa16.89■□□□□ 0.29
LYSMD3-202ENST00000453259 ZMYM1Q5SVZ6 1142 aa16.89■□□□□ 0.29
LYSMD3-202ENST00000453259 KCTD1Q719H9 257 aa16.89■□□□□ 0.29
LYSMD3-202ENST00000453259 TICAM2Q86XR7 235 aa16.89■□□□□ 0.29
LYSMD3-202ENST00000453259 WDR11Q9BZH6 1224 aa16.89■□□□□ 0.29
LYSMD3-202ENST00000453259 ANAPC4Q9UJX5 808 aa16.89■□□□□ 0.29
LYSMD3-202ENST00000453259 RCAN3Q9UKA8 241 aa16.89■□□□□ 0.29
LYSMD3-202ENST00000453259 KIF28PB7ZC32 967 aa16.88■□□□□ 0.29
LYSMD3-202ENST00000453259 ORC4O43929 436 aa16.88■□□□□ 0.29
LYSMD3-202ENST00000453259 RABGGTBP53611 331 aa16.88■□□□□ 0.29
LYSMD3-202ENST00000453259 BFSP2Q13515 415 aa16.88■□□□□ 0.29
LYSMD3-202ENST00000453259 EEPD1Q7L9B9 569 aa16.88■□□□□ 0.29
LYSMD3-202ENST00000453259 DNERQ8NFT8 737 aa16.88■□□□□ 0.29
LYSMD3-202ENST00000453259 SCFD2Q8WU76 684 aa16.88■□□□□ 0.29
LYSMD3-202ENST00000453259 VWCEQ96DN2 955 aa16.88■□□□□ 0.29
LYSMD3-202ENST00000453259 FAM122AQ96E09 287 aa16.88■□□□□ 0.29
LYSMD3-202ENST00000453259 SCLYQ96I15 445 aa16.88■□□□□ 0.29
LYSMD3-202ENST00000453259 A6NJR5 290 aa16.87■□□□□ 0.29
LYSMD3-202ENST00000453259 PARNO95453 639 aaKnown RBP16.87■□□□□ 0.29
LYSMD3-202ENST00000453259 CA3P07451 260 aa16.87■□□□□ 0.29
LYSMD3-202ENST00000453259 PPP2R5BQ15173 497 aa16.87■□□□□ 0.29
LYSMD3-202ENST00000453259 CCDC155Q8N6L0 562 aa16.87■□□□□ 0.29
LYSMD3-202ENST00000453259 RETREG2Q8NC44 543 aa16.87■□□□□ 0.29
LYSMD3-202ENST00000453259 FSD1Q9BTV5 496 aa16.87■□□□□ 0.29
LYSMD3-202ENST00000453259 IL17RBQ9NRM6 502 aa16.87■□□□□ 0.29
LYSMD3-202ENST00000453259 TRMT13Q9NUP7 481 aaKnown RBP16.87■□□□□ 0.29
LYSMD3-202ENST00000453259 MTCH2Q9Y6C9 303 aa16.87■□□□□ 0.29
LYSMD3-202ENST00000453259 SCN10AQ9Y5Y9 1956 aa16.87■□□□□ 0.29
LYSMD3-202ENST00000453259 LCTP09848 1927 aa16.86■□□□□ 0.29
LYSMD3-202ENST00000453259 FGRP09769 529 aa16.86■□□□□ 0.29
LYSMD3-202ENST00000453259 BAATQ14032 418 aaPredicted RBP16.86■□□□□ 0.29
LYSMD3-202ENST00000453259 TTLL4Q14679 1199 aa16.86■□□□□ 0.29
LYSMD3-202ENST00000453259 CCDC96Q2M329 555 aa16.86■□□□□ 0.29
LYSMD3-202ENST00000453259 OR6J1Q8NGC5 347 aa16.86■□□□□ 0.29
LYSMD3-202ENST00000453259 RNF216Q9NWF9 866 aaPredicted RBP16.86■□□□□ 0.29
LYSMD3-202ENST00000453259 WDR19Q8NEZ3 1342 aa16.86■□□□□ 0.29
LYSMD3-202ENST00000453259 TANC1Q9C0D5 1861 aa16.86■□□□□ 0.29
LYSMD3-202ENST00000453259 TOP1P11387 765 aaKnown RBP16.85■□□□□ 0.29
LYSMD3-202ENST00000453259 CYP2C9P11712 490 aa16.85■□□□□ 0.29
LYSMD3-202ENST00000453259 EDNRBP24530 442 aa16.85■□□□□ 0.29
LYSMD3-202ENST00000453259 NT5C2P49902 561 aa16.85■□□□□ 0.29
LYSMD3-202ENST00000453259 PDE4DQ08499 809 aa16.85■□□□□ 0.29
LYSMD3-202ENST00000453259 SKIV2LQ15477 1246 aaKnown RBP16.85■□□□□ 0.29
LYSMD3-202ENST00000453259 SYDE2Q5VT97 1194 aa16.85■□□□□ 0.29
LYSMD3-202ENST00000453259 CAGE1Q8TC20 777 aa16.85■□□□□ 0.29
LYSMD3-202ENST00000453259 PI4K2BQ8TCG2 481 aa16.85■□□□□ 0.29
LYSMD3-202ENST00000453259 TCP11L1Q9NUJ3 509 aa16.85■□□□□ 0.29
LYSMD3-202ENST00000453259 LMCD1Q9NZU5 365 aa16.85■□□□□ 0.29
LYSMD3-202ENST00000453259 XIRP2A4UGR9 3374 aa16.84■□□□□ 0.29
LYSMD3-202ENST00000453259 PTPDC1A2A3K4 754 aa16.84■□□□□ 0.29
LYSMD3-202ENST00000453259 RANBP6O60518 1105 aaKnown RBP16.84■□□□□ 0.29
LYSMD3-202ENST00000453259 MYL3P08590 195 aa16.84■□□□□ 0.29
LYSMD3-202ENST00000453259 IQCF3P0C7M6 154 aa16.84■□□□□ 0.29
LYSMD3-202ENST00000453259 PCP11498 1178 aaKnown RBP16.84■□□□□ 0.29
LYSMD3-202ENST00000453259 MYOGP15173 224 aa16.84■□□□□ 0.29
LYSMD3-202ENST00000453259 ALX1Q15699 326 aa16.84■□□□□ 0.29
LYSMD3-202ENST00000453259 NBPF20Q3BBV1 942 aa16.84■□□□□ 0.29
LYSMD3-202ENST00000453259 TSHZ3Q63HK5 1081 aa16.84■□□□□ 0.29
LYSMD3-202ENST00000453259 RNF207Q6ZRF8 634 aa16.84■□□□□ 0.29
LYSMD3-202ENST00000453259 DEFB128Q7Z7B8 93 aa16.84■□□□□ 0.29
LYSMD3-202ENST00000453259 HERC6Q8IVU3 1022 aa16.84■□□□□ 0.29
LYSMD3-202ENST00000453259 MICALL1Q8N3F8 863 aa16.84■□□□□ 0.29
LYSMD3-202ENST00000453259 RGS22Q8NE09 1264 aa16.84■□□□□ 0.29
LYSMD3-202ENST00000453259 AFAP1L1Q8TED9 768 aa16.84■□□□□ 0.29
LYSMD3-202ENST00000453259 SEC62Q99442 399 aaKnown RBP16.84■□□□□ 0.29
LYSMD3-202ENST00000453259 NFIBO00712 420 aa16.83■□□□□ 0.28
LYSMD3-202ENST00000453259 ZMYM6O95789 1325 aa16.83■□□□□ 0.28
LYSMD3-202ENST00000453259 TAP1Q03518 808 aa16.83■□□□□ 0.28
LYSMD3-202ENST00000453259 FAM47CQ5HY64 1035 aa16.83■□□□□ 0.28
LYSMD3-202ENST00000453259 SESTD1Q86VW0 696 aa16.83■□□□□ 0.28
LYSMD3-202ENST00000453259 HLA-CQ95604 372 aa16.83■□□□□ 0.28
LYSMD3-202ENST00000453259 TTC14Q96N46 770 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms