RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 TAL1P17542 331 aaPredicted RBP13.31□□□□□ -0.28
SCN9A-204ENST00000452182 GNA11P29992 359 aa13.31□□□□□ -0.28
SCN9A-204ENST00000452182 FCGRTP55899 365 aa13.31□□□□□ -0.28
SCN9A-204ENST00000452182 KIF22Q14807 665 aa13.31□□□□□ -0.28
SCN9A-204ENST00000452182 PLEKHH3Q7Z736 793 aa13.31□□□□□ -0.28
SCN9A-204ENST00000452182 SHISA4Q96DD7 197 aa13.31□□□□□ -0.28
SCN9A-204ENST00000452182 PHF20Q9BVI0 1012 aa13.31□□□□□ -0.28
SCN9A-204ENST00000452182 PSTPIP2Q9H939 334 aa13.31□□□□□ -0.28
SCN9A-204ENST00000452182 RIC8AQ9NPQ8 531 aa13.31□□□□□ -0.28
SCN9A-204ENST00000452182 A1CFQ9NQ94 594 aaKnown RBP13.31□□□□□ -0.28
SCN9A-204ENST00000452182 IVNS1ABPQ9Y6Y0 642 aa13.31□□□□□ -0.28
SCN9A-204ENST00000452182 ZNFX1Q9P2E3 1918 aaKnown RBP13.31□□□□□ -0.28
SCN9A-204ENST00000452182 SMCO2A6NFE2 343 aa13.31□□□□□ -0.28
SCN9A-204ENST00000452182 TNPO2O14787 897 aaKnown RBP13.31□□□□□ -0.28
SCN9A-204ENST00000452182 GNRH1P01148 92 aa13.31□□□□□ -0.28
SCN9A-204ENST00000452182 PTPREP23469 700 aa13.31□□□□□ -0.28
SCN9A-204ENST00000452182 CALML3P27482 149 aa13.31□□□□□ -0.28
SCN9A-204ENST00000452182 HSD17B4P51659 736 aa13.31□□□□□ -0.28
SCN9A-204ENST00000452182 MRPL12P52815 198 aaKnown RBP13.31□□□□□ -0.28
SCN9A-204ENST00000452182 TRIM29Q14134 588 aa13.31□□□□□ -0.28
SCN9A-204ENST00000452182 GRB14Q14449 540 aa13.31□□□□□ -0.28
SCN9A-204ENST00000452182 KCTD2Q14681 263 aa13.31□□□□□ -0.28
SCN9A-204ENST00000452182 DAGLBQ8NCG7 672 aa13.31□□□□□ -0.28
SCN9A-204ENST00000452182 FBXO18Q8NFZ0 1043 aa13.31□□□□□ -0.28
SCN9A-204ENST00000452182 ZNF296Q8WUU4 475 aaPredicted RBP13.31□□□□□ -0.28
SCN9A-204ENST00000452182 CUL5Q93034 780 aa13.31□□□□□ -0.28
SCN9A-204ENST00000452182 ERO1AQ96HE7 468 aa13.31□□□□□ -0.28
SCN9A-204ENST00000452182 C6orf50Q9HD87 102 aa13.31□□□□□ -0.28
SCN9A-204ENST00000452182 CYP39A1Q9NYL5 469 aa13.31□□□□□ -0.28
SCN9A-204ENST00000452182 SLC15A5A6NIM6 579 aa13.3□□□□□ -0.28
SCN9A-204ENST00000452182 MEIS2O14770 477 aa13.3□□□□□ -0.28
SCN9A-204ENST00000452182 PDIA4P13667 645 aaKnown RBP13.3□□□□□ -0.28
SCN9A-204ENST00000452182 PDCP20941 246 aa13.3□□□□□ -0.28
SCN9A-204ENST00000452182 CTGFP29279 349 aa13.3□□□□□ -0.28
SCN9A-204ENST00000452182 PSMC4P43686 418 aa13.3□□□□□ -0.28
SCN9A-204ENST00000452182 ADCY7P51828 1080 aa13.3□□□□□ -0.28
SCN9A-204ENST00000452182 ARHGEF6Q15052 776 aa13.3□□□□□ -0.28
SCN9A-204ENST00000452182 WDR78Q5VTH9 848 aa13.3□□□□□ -0.28
SCN9A-204ENST00000452182 MCTP2Q6DN12 878 aa13.3□□□□□ -0.28
SCN9A-204ENST00000452182 RNF207Q6ZRF8 634 aa13.3□□□□□ -0.28
SCN9A-204ENST00000452182 ANKRD35Q8N283 1001 aa13.3□□□□□ -0.28
SCN9A-204ENST00000452182 BICD2Q8TD16 824 aa13.3□□□□□ -0.28
SCN9A-204ENST00000452182 C8orf76Q96K31 380 aa13.3□□□□□ -0.28
SCN9A-204ENST00000452182 TRIM47Q96LD4 638 aa13.3□□□□□ -0.28
SCN9A-204ENST00000452182 MMP19Q99542 508 aa13.3□□□□□ -0.28
SCN9A-204ENST00000452182 CWC22Q9HCG8 908 aaKnown RBP13.3□□□□□ -0.28
SCN9A-204ENST00000452182 ZSWIM8A7E2V4 1837 aa13.29□□□□□ -0.28
SCN9A-204ENST00000452182 DNAJC25-GNG10A0A024R161 153 aa13.29□□□□□ -0.28
SCN9A-204ENST00000452182 GCOM1H8Y6P7 765 aaPredicted RBP13.29□□□□□ -0.28
SCN9A-204ENST00000452182 MMP1P03956 469 aa13.29□□□□□ -0.28
SCN9A-204ENST00000452182 POLR2MP0CAP2 368 aa13.29□□□□□ -0.28
SCN9A-204ENST00000452182 CLK2P49760 499 aaKnown RBP13.29□□□□□ -0.28
SCN9A-204ENST00000452182 NLRP5P59047 1200 aa13.29□□□□□ -0.28
SCN9A-204ENST00000452182 RPS6P62753 249 aaKnown RBP13.29□□□□□ -0.28
SCN9A-204ENST00000452182 NPY5RQ15761 445 aa13.29□□□□□ -0.28
SCN9A-204ENST00000452182 MORN1Q5T089 497 aa13.29□□□□□ -0.28
SCN9A-204ENST00000452182 KRT40Q6A162 431 aa13.29□□□□□ -0.28
SCN9A-204ENST00000452182 NSMFQ6X4W1 530 aa13.29□□□□□ -0.28
SCN9A-204ENST00000452182 SOCS4Q8WXH5 440 aa13.29□□□□□ -0.28
SCN9A-204ENST00000452182 TBC1D5Q92609 795 aa13.29□□□□□ -0.28
SCN9A-204ENST00000452182 ARHGAP39Q9C0H5 1083 aa13.29□□□□□ -0.28
SCN9A-204ENST00000452182 TSKSQ9UJT2 592 aa13.29□□□□□ -0.28
SCN9A-204ENST00000452182 PCDHA4Q9UN74 947 aa13.29□□□□□ -0.28
SCN9A-204ENST00000452182 DOCK3Q8IZD9 2030 aa13.29□□□□□ -0.28
SCN9A-204ENST00000452182 LCTP09848 1927 aa13.29□□□□□ -0.28
SCN9A-204ENST00000452182 PLXNA1Q9UIW2 1896 aa13.29□□□□□ -0.28
SCN9A-204ENST00000452182 CFBP00751 764 aa13.28□□□□□ -0.28
SCN9A-204ENST00000452182 HOXC6P09630 235 aa13.28□□□□□ -0.28
SCN9A-204ENST00000452182 HSPA1AP0DMV8 641 aaKnown RBP13.28□□□□□ -0.28
SCN9A-204ENST00000452182 HSPA1BP0DMV9 641 aaKnown RBP13.28□□□□□ -0.28
SCN9A-204ENST00000452182 ADORA2AP29274 412 aa13.28□□□□□ -0.28
SCN9A-204ENST00000452182 LARP1BQ659C4 914 aaKnown RBP13.28□□□□□ -0.28
SCN9A-204ENST00000452182 FAM133AQ8N9E0 248 aa13.28□□□□□ -0.28
SCN9A-204ENST00000452182 CD99L2Q8TCZ2 262 aa13.28□□□□□ -0.28
SCN9A-204ENST00000452182 USP6NLQ92738 828 aa13.28□□□□□ -0.28
SCN9A-204ENST00000452182 NUDT12Q9BQG2 462 aa13.28□□□□□ -0.28
SCN9A-204ENST00000452182 GJB4Q9NTQ9 266 aa13.28□□□□□ -0.28
SCN9A-204ENST00000452182 GJD2Q9UKL4 321 aa13.28□□□□□ -0.28
SCN9A-204ENST00000452182 KCNJ14Q9UNX9 436 aa13.28□□□□□ -0.28
SCN9A-204ENST00000452182 DIS3Q9Y2L1 958 aaKnown RBP13.28□□□□□ -0.28
SCN9A-204ENST00000452182 CASP8AP2Q9UKL3 1982 aa13.28□□□□□ -0.28
SCN9A-204ENST00000452182 LOC102724159A0A0B4J2E5 919 aa13.28□□□□□ -0.28
SCN9A-204ENST00000452182 M0R2N6 131 aa13.28□□□□□ -0.28
SCN9A-204ENST00000452182 FOXN1O15353 648 aa13.28□□□□□ -0.28
SCN9A-204ENST00000452182 FOSP01100 380 aaPredicted RBP13.28□□□□□ -0.28
SCN9A-204ENST00000452182 HSPA8P11142 646 aaKnown RBP13.28□□□□□ -0.28
SCN9A-204ENST00000452182 HOXD10P28358 340 aa13.28□□□□□ -0.28
SCN9A-204ENST00000452182 CTCFP49711 727 aaPredicted RBP13.28□□□□□ -0.28
SCN9A-204ENST00000452182 CAP1Q01518 475 aa13.28□□□□□ -0.28
SCN9A-204ENST00000452182 MAP2K5Q13163 448 aa13.28□□□□□ -0.28
SCN9A-204ENST00000452182 AP3B2Q13367 1082 aa13.28□□□□□ -0.28
SCN9A-204ENST00000452182 BAATQ14032 418 aaPredicted RBP13.28□□□□□ -0.28
SCN9A-204ENST00000452182 PWP2Q15269 919 aaKnown RBP13.28□□□□□ -0.28
SCN9A-204ENST00000452182 USP17L6PQ6QN14 398 aa13.28□□□□□ -0.28
SCN9A-204ENST00000452182 SLC30A10Q6XR72 485 aa13.28□□□□□ -0.28
SCN9A-204ENST00000452182 BLIDQ8IZY5 108 aa13.28□□□□□ -0.28
SCN9A-204ENST00000452182 REXO1Q8N1G1 1221 aaKnown RBP13.28□□□□□ -0.28
SCN9A-204ENST00000452182 DNERQ8NFT8 737 aa13.28□□□□□ -0.28
SCN9A-204ENST00000452182 SYTL5Q8TDW5 730 aaPredicted RBP13.28□□□□□ -0.28
SCN9A-204ENST00000452182 BRMS1Q9HCU9 246 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 132.1 ms