RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 LZTS2Q9BRK4 669 aa12.18□□□□□ -0.46
PKP4-206ENST00000452162 WDR18Q9BV38 432 aa12.18□□□□□ -0.46
PKP4-206ENST00000452162 HSD3B7Q9H2F3 369 aa12.18□□□□□ -0.46
PKP4-206ENST00000452162 AS3MTQ9HBK9 375 aa12.18□□□□□ -0.46
PKP4-206ENST00000452162 STX8Q9UNK0 236 aa12.18□□□□□ -0.46
PKP4-206ENST00000452162 MYH4Q9Y623 1939 aa12.17□□□□□ -0.46
PKP4-206ENST00000452162 BTBD19C9JJ37 291 aa12.17□□□□□ -0.46
PKP4-206ENST00000452162 M0R2N6 131 aa12.17□□□□□ -0.46
PKP4-206ENST00000452162 PRR29P0C7W0 189 aa12.17□□□□□ -0.46
PKP4-206ENST00000452162 BMP6P22004 513 aa12.17□□□□□ -0.46
PKP4-206ENST00000452162 SARSP49591 514 aaKnown RBP12.17□□□□□ -0.46
PKP4-206ENST00000452162 LRMPQ12912 555 aa12.17□□□□□ -0.46
PKP4-206ENST00000452162 MTMR2Q13614 643 aa12.17□□□□□ -0.46
PKP4-206ENST00000452162 TYW1BQ6NUM6 668 aa12.17□□□□□ -0.46
PKP4-206ENST00000452162 TMEM179Q6ZVK1 233 aa12.17□□□□□ -0.46
PKP4-206ENST00000452162 BLIDQ8IZY5 108 aa12.17□□□□□ -0.46
PKP4-206ENST00000452162 ACER1Q8TDN7 264 aa12.17□□□□□ -0.46
PKP4-206ENST00000452162 BEGAINQ9BUH8 593 aa12.17□□□□□ -0.46
PKP4-206ENST00000452162 MAN1B1Q9UKM7 699 aa12.17□□□□□ -0.46
PKP4-206ENST00000452162 PCDHA4Q9UN74 947 aa12.17□□□□□ -0.46
PKP4-206ENST00000452162 A0A087X0B3 334 aa12.16□□□□□ -0.46
PKP4-206ENST00000452162 HMGCS2P54868 508 aa12.16□□□□□ -0.46
PKP4-206ENST00000452162 WWC2Q6AWC2 1192 aa12.16□□□□□ -0.46
PKP4-206ENST00000452162 KANK3Q6NY19 840 aa12.16□□□□□ -0.46
PKP4-206ENST00000452162 FAM177A1Q8N128 213 aaPredicted RBP12.16□□□□□ -0.46
PKP4-206ENST00000452162 DAGLBQ8NCG7 672 aa12.16□□□□□ -0.46
PKP4-206ENST00000452162 CACTINQ8WUQ7 758 aaKnown RBP12.16□□□□□ -0.46
PKP4-206ENST00000452162 SPZ1Q9BXG8 430 aa12.16□□□□□ -0.46
PKP4-206ENST00000452162 R3HCC1Q9Y3T6 440 aaKnown RBP12.16□□□□□ -0.46
PKP4-206ENST00000452162 LOC285556D6RIA3 1793 aa12.16□□□□□ -0.46
PKP4-206ENST00000452162 CASP8AP2Q9UKL3 1982 aa12.16□□□□□ -0.46
PKP4-206ENST00000452162 STXBP3O00186 592 aa12.16□□□□□ -0.46
PKP4-206ENST00000452162 TOP1P11387 765 aaKnown RBP12.16□□□□□ -0.46
PKP4-206ENST00000452162 BACE1P56817 501 aa12.16□□□□□ -0.46
PKP4-206ENST00000452162 TPM4P67936 248 aa12.16□□□□□ -0.46
PKP4-206ENST00000452162 PTGDRQ13258 359 aa12.16□□□□□ -0.46
PKP4-206ENST00000452162 GPAT2Q6NUI2 795 aa12.16□□□□□ -0.46
PKP4-206ENST00000452162 GADL1Q6ZQY3 521 aa12.16□□□□□ -0.46
PKP4-206ENST00000452162 RASGRP2Q7LDG7 609 aa12.16□□□□□ -0.46
PKP4-206ENST00000452162 SIAH1Q8IUQ4 282 aa12.16□□□□□ -0.46
PKP4-206ENST00000452162 SPATA20Q8TB22 786 aa12.16□□□□□ -0.46
PKP4-206ENST00000452162 SYMPKQ92797 1274 aaKnown RBP12.16□□□□□ -0.46
PKP4-206ENST00000452162 CEP95Q96GE4 821 aa12.16□□□□□ -0.46
PKP4-206ENST00000452162 EPSTI1Q96J88 318 aa12.16□□□□□ -0.46
PKP4-206ENST00000452162 R3HDMLQ9H3Y0 253 aa12.16□□□□□ -0.46
PKP4-206ENST00000452162 A0A1W2PRG0 241 aa12.15□□□□□ -0.46
PKP4-206ENST00000452162 USP17L10C9JJH3 530 aa12.15□□□□□ -0.46
PKP4-206ENST00000452162 MYL5Q02045 173 aa12.15□□□□□ -0.46
PKP4-206ENST00000452162 MORC3Q14149 939 aa12.15□□□□□ -0.46
PKP4-206ENST00000452162 ZYXQ15942 572 aaKnown RBP12.15□□□□□ -0.46
PKP4-206ENST00000452162 GRAMD1CQ8IYS0 662 aa12.15□□□□□ -0.46
PKP4-206ENST00000452162 PDILTQ8N807 584 aa12.15□□□□□ -0.46
PKP4-206ENST00000452162 BARHL2Q9NY43 387 aa12.15□□□□□ -0.46
PKP4-206ENST00000452162 KLRF2D3W0D1 207 aa12.15□□□□□ -0.46
PKP4-206ENST00000452162 TBC1D8O95759 1140 aa12.15□□□□□ -0.46
PKP4-206ENST00000452162 ICA1Q05084 483 aa12.15□□□□□ -0.46
PKP4-206ENST00000452162 TREML2Q5T2D2 321 aa12.15□□□□□ -0.46
PKP4-206ENST00000452162 GALNT17Q6IS24 598 aa12.15□□□□□ -0.46
PKP4-206ENST00000452162 SH3RF1Q7Z6J0 888 aa12.15□□□□□ -0.46
PKP4-206ENST00000452162 CCDC148Q8NFR7 591 aa12.15□□□□□ -0.46
PKP4-206ENST00000452162 SMARCE1Q969G3 411 aa12.15□□□□□ -0.46
PKP4-206ENST00000452162 XPO4Q9C0E2 1151 aaKnown RBP12.15□□□□□ -0.46
PKP4-206ENST00000452162 IFNKQ9P0W0 207 aa12.15□□□□□ -0.46
PKP4-206ENST00000452162 IGKV6D-41A0A0C4DH26 115 aa12.14□□□□□ -0.47
PKP4-206ENST00000452162 TPM2P07951 284 aa12.14□□□□□ -0.47
PKP4-206ENST00000452162 PARP1P09874 1014 aaKnown RBP12.14□□□□□ -0.47
PKP4-206ENST00000452162 SLFN14P0C7P3 912 aa12.14□□□□□ -0.47
PKP4-206ENST00000452162 GOLGA8HP0CJ92 632 aa12.14□□□□□ -0.47
PKP4-206ENST00000452162 SMARCA1P28370 1054 aa12.14□□□□□ -0.47
PKP4-206ENST00000452162 IL17AQ16552 155 aa12.14□□□□□ -0.47
PKP4-206ENST00000452162 SH3D19Q5HYK7 790 aa12.14□□□□□ -0.47
PKP4-206ENST00000452162 FASTKD5Q7L8L6 764 aaKnown RBP12.14□□□□□ -0.47
PKP4-206ENST00000452162 LRRC8AQ8IWT6 810 aa12.14□□□□□ -0.47
PKP4-206ENST00000452162 C4orf32Q8N8J7 132 aa12.14□□□□□ -0.47
PKP4-206ENST00000452162 TRIML1Q8N9V2 468 aa12.14□□□□□ -0.47
PKP4-206ENST00000452162 DHX58Q96C10 678 aa12.14□□□□□ -0.47
PKP4-206ENST00000452162 FEZ1Q99689 392 aa12.14□□□□□ -0.47
PKP4-206ENST00000452162 EMILIN3Q9NT22 766 aa12.14□□□□□ -0.47
PKP4-206ENST00000452162 MTMR7Q9Y216 660 aa12.14□□□□□ -0.47
PKP4-206ENST00000452162 VWA3AA6NCI4 1184 aa12.14□□□□□ -0.47
PKP4-206ENST00000452162 PDHXO00330 501 aa12.14□□□□□ -0.47
PKP4-206ENST00000452162 NEMFO60524 1076 aa12.14□□□□□ -0.47
PKP4-206ENST00000452162 EEF2P13639 858 aaKnown RBP12.14□□□□□ -0.47
PKP4-206ENST00000452162 ATP2B2Q01814 1243 aa12.14□□□□□ -0.47
PKP4-206ENST00000452162 ARID5BQ14865 1188 aa12.14□□□□□ -0.47
PKP4-206ENST00000452162 HEATR3Q7Z4Q2 680 aa12.14□□□□□ -0.47
PKP4-206ENST00000452162 ANKRD23Q86SG2 305 aa12.14□□□□□ -0.47
PKP4-206ENST00000452162 RASGRP4Q8TDF6 673 aa12.14□□□□□ -0.47
PKP4-206ENST00000452162 KANSL2Q9H9L4 492 aa12.14□□□□□ -0.47
PKP4-206ENST00000452162 SAGE1Q9NXZ1 904 aa12.14□□□□□ -0.47
PKP4-206ENST00000452162 PCDHA6Q9UN73 950 aa12.14□□□□□ -0.47
PKP4-206ENST00000452162 PCDHA8Q9Y5H6 950 aa12.14□□□□□ -0.47
PKP4-206ENST00000452162 C19orf81C9J6K1 198 aa12.13□□□□□ -0.47
PKP4-206ENST00000452162 CA12O43570 354 aa12.13□□□□□ -0.47
PKP4-206ENST00000452162 ALDH1A1P00352 501 aa12.13□□□□□ -0.47
PKP4-206ENST00000452162 ATP1A3P13637 1013 aa12.13□□□□□ -0.47
PKP4-206ENST00000452162 MCM7P33993 719 aa12.13□□□□□ -0.47
PKP4-206ENST00000452162 FANCCQ00597 558 aa12.13□□□□□ -0.47
PKP4-206ENST00000452162 CRHR2Q13324 411 aa12.13□□□□□ -0.47
PKP4-206ENST00000452162 ARL6IP4Q66PJ3 421 aaKnown RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms