RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 BIN1O00499 593 aa11.97□□□□□ -0.49
VIPAS39-203ENST00000448935 ADAMTS3O15072 1205 aa11.97□□□□□ -0.49
VIPAS39-203ENST00000448935 ASNSP08243 561 aa11.97□□□□□ -0.49
VIPAS39-203ENST00000448935 GCFC2P16383 781 aaKnown RBP11.97□□□□□ -0.49
VIPAS39-203ENST00000448935 CDC37Q16543 378 aaPredicted RBP11.97□□□□□ -0.49
VIPAS39-203ENST00000448935 QRICH1Q2TAL8 776 aa11.97□□□□□ -0.49
VIPAS39-203ENST00000448935 SYDE2Q5VT97 1194 aa11.97□□□□□ -0.49
VIPAS39-203ENST00000448935 JAKMIP3Q5VZ66 844 aa11.97□□□□□ -0.49
VIPAS39-203ENST00000448935 DHX40Q8IX18 779 aaKnown RBP11.97□□□□□ -0.49
VIPAS39-203ENST00000448935 AOPEPQ8N6M6 819 aa11.97□□□□□ -0.49
VIPAS39-203ENST00000448935 MLKLQ8NB16 471 aa11.97□□□□□ -0.49
VIPAS39-203ENST00000448935 HOOK2Q96ED9 719 aa11.97□□□□□ -0.49
VIPAS39-203ENST00000448935 AMNQ9BXJ7 453 aa11.97□□□□□ -0.49
VIPAS39-203ENST00000448935 TMEM39BQ9GZU3 492 aa11.97□□□□□ -0.49
VIPAS39-203ENST00000448935 PSTPIP2Q9H939 334 aa11.97□□□□□ -0.49
VIPAS39-203ENST00000448935 C19orf67A6NJJ6 358 aa11.96□□□□□ -0.5
VIPAS39-203ENST00000448935 CDC25BP30305 580 aa11.96□□□□□ -0.5
VIPAS39-203ENST00000448935 CAP2P40123 477 aa11.96□□□□□ -0.5
VIPAS39-203ENST00000448935 UBA7P41226 1012 aa11.96□□□□□ -0.5
VIPAS39-203ENST00000448935 SARSP49591 514 aaKnown RBP11.96□□□□□ -0.5
VIPAS39-203ENST00000448935 CLK2P49760 499 aaKnown RBP11.96□□□□□ -0.5
VIPAS39-203ENST00000448935 SEMA3FQ13275 785 aa11.96□□□□□ -0.5
VIPAS39-203ENST00000448935 AP3B2Q13367 1082 aa11.96□□□□□ -0.5
VIPAS39-203ENST00000448935 NBPF9Q3BBW0 867 aa11.96□□□□□ -0.5
VIPAS39-203ENST00000448935 USP49Q70CQ1 688 aa11.96□□□□□ -0.5
VIPAS39-203ENST00000448935 SH3RF1Q7Z6J0 888 aa11.96□□□□□ -0.5
VIPAS39-203ENST00000448935 FBXO11Q86XK2 927 aa11.96□□□□□ -0.5
VIPAS39-203ENST00000448935 CHURC1Q8WUH1 139 aa11.96□□□□□ -0.5
VIPAS39-203ENST00000448935 GSDMAQ96QA5 445 aa11.96□□□□□ -0.5
VIPAS39-203ENST00000448935 RAB34Q9BZG1 259 aa11.96□□□□□ -0.5
VIPAS39-203ENST00000448935 CCSER1Q9C0I3 900 aa11.96□□□□□ -0.5
VIPAS39-203ENST00000448935 CUEDC2Q9H467 287 aa11.96□□□□□ -0.5
VIPAS39-203ENST00000448935 MAGEF1Q9HAY2 307 aa11.96□□□□□ -0.5
VIPAS39-203ENST00000448935 PCDHA1Q9Y5I3 950 aa11.96□□□□□ -0.5
VIPAS39-203ENST00000448935 ATAD5Q96QE3 1844 aa11.96□□□□□ -0.5
VIPAS39-203ENST00000448935 DICER1Q9UPY3 1922 aaKnown RBP11.95□□□□□ -0.5
VIPAS39-203ENST00000448935 TMEM232C9JQI7 657 aa11.95□□□□□ -0.5
VIPAS39-203ENST00000448935 H7C1D1 291 aa11.95□□□□□ -0.5
VIPAS39-203ENST00000448935 PLA2G6O60733 806 aa11.95□□□□□ -0.5
VIPAS39-203ENST00000448935 PPP1R11O60927 126 aaPredicted RBP11.95□□□□□ -0.5
VIPAS39-203ENST00000448935 MYL1P05976 194 aa11.95□□□□□ -0.5
VIPAS39-203ENST00000448935 GMPSP49915 693 aaPredicted RBP11.95□□□□□ -0.5
VIPAS39-203ENST00000448935 ZNF75DP51815 510 aa11.95□□□□□ -0.5
VIPAS39-203ENST00000448935 STAT2P52630 851 aa11.95□□□□□ -0.5
VIPAS39-203ENST00000448935 RASA3Q14644 834 aa11.95□□□□□ -0.5
VIPAS39-203ENST00000448935 TMEM266Q2M3C6 531 aa11.95□□□□□ -0.5
VIPAS39-203ENST00000448935 PPP4R3AQ6IN85 833 aa11.95□□□□□ -0.5
VIPAS39-203ENST00000448935 FAM160B2Q86V87 743 aa11.95□□□□□ -0.5
VIPAS39-203ENST00000448935 PLA2G4DQ86XP0 818 aa11.95□□□□□ -0.5
VIPAS39-203ENST00000448935 RASSF8Q8NHQ8 419 aa11.95□□□□□ -0.5
VIPAS39-203ENST00000448935 SPATA20Q8TB22 786 aa11.95□□□□□ -0.5
VIPAS39-203ENST00000448935 PAGE5Q96GU1 130 aa11.95□□□□□ -0.5
VIPAS39-203ENST00000448935 PGAP2Q9UHJ9 254 aa11.95□□□□□ -0.5
VIPAS39-203ENST00000448935 CNOT7Q9UIV1 285 aaKnown RBP11.95□□□□□ -0.5
VIPAS39-203ENST00000448935 A0A1W2PRG0 241 aa11.94□□□□□ -0.5
VIPAS39-203ENST00000448935 FOSP01100 380 aaPredicted RBP11.94□□□□□ -0.5
VIPAS39-203ENST00000448935 STAT6P42226 847 aa11.94□□□□□ -0.5
VIPAS39-203ENST00000448935 MYL5Q02045 173 aa11.94□□□□□ -0.5
VIPAS39-203ENST00000448935 RASSF7Q02833 373 aa11.94□□□□□ -0.5
VIPAS39-203ENST00000448935 RRP1BQ14684 758 aaKnown RBP11.94□□□□□ -0.5
VIPAS39-203ENST00000448935 IL17AQ16552 155 aa11.94□□□□□ -0.5
VIPAS39-203ENST00000448935 SHROOM1Q2M3G4 852 aaPredicted RBP11.94□□□□□ -0.5
VIPAS39-203ENST00000448935 MRFAP1L1Q96HT8 127 aa11.94□□□□□ -0.5
VIPAS39-203ENST00000448935 TMEM60Q9H2L4 133 aa11.94□□□□□ -0.5
VIPAS39-203ENST00000448935 VCPKMTQ9H867 229 aa11.94□□□□□ -0.5
VIPAS39-203ENST00000448935 SPON1Q9HCB6 807 aa11.94□□□□□ -0.5
VIPAS39-203ENST00000448935 DISC1Q9NRI5 854 aa11.94□□□□□ -0.5
VIPAS39-203ENST00000448935 RMND1Q9NWS8 449 aa11.94□□□□□ -0.5
VIPAS39-203ENST00000448935 TMEM260Q9NX78 707 aa11.94□□□□□ -0.5
VIPAS39-203ENST00000448935 MAN1B1Q9UKM7 699 aa11.94□□□□□ -0.5
VIPAS39-203ENST00000448935 ZKSCAN5Q9Y2L8 839 aa11.94□□□□□ -0.5
VIPAS39-203ENST00000448935 GJA3Q9Y6H8 435 aa11.94□□□□□ -0.5
VIPAS39-203ENST00000448935 AP5Z1O43299 807 aa11.93□□□□□ -0.5
VIPAS39-203ENST00000448935 USP11P51784 963 aa11.93□□□□□ -0.5
VIPAS39-203ENST00000448935 JAG1P78504 1218 aa11.93□□□□□ -0.5
VIPAS39-203ENST00000448935 MORC3Q14149 939 aa11.93□□□□□ -0.5
VIPAS39-203ENST00000448935 CALCRLQ16602 461 aa11.93□□□□□ -0.5
VIPAS39-203ENST00000448935 KIF4BQ2VIQ3 1234 aa11.93□□□□□ -0.5
VIPAS39-203ENST00000448935 RRAGBQ5VZM2 374 aa11.93□□□□□ -0.5
VIPAS39-203ENST00000448935 DCAF15Q66K64 600 aa11.93□□□□□ -0.5
VIPAS39-203ENST00000448935 MIGA2Q7L4E1 593 aa11.93□□□□□ -0.5
VIPAS39-203ENST00000448935 DRC7Q8IY82 874 aa11.93□□□□□ -0.5
VIPAS39-203ENST00000448935 A0A087X0B3 334 aa11.93□□□□□ -0.5
VIPAS39-203ENST00000448935 FOXN1O15353 648 aa11.93□□□□□ -0.5
VIPAS39-203ENST00000448935 PDIA5Q14554 519 aa11.93□□□□□ -0.5
VIPAS39-203ENST00000448935 DHX8Q14562 1220 aaKnown RBP11.93□□□□□ -0.5
VIPAS39-203ENST00000448935 PDXDC2PQ6P474 469 aa11.93□□□□□ -0.5
VIPAS39-203ENST00000448935 MOXD1Q6UVY6 613 aa11.93□□□□□ -0.5
VIPAS39-203ENST00000448935 APOBEC3FQ8IUX4 373 aaKnown RBP11.93□□□□□ -0.5
VIPAS39-203ENST00000448935 GTPBP4Q9BZE4 634 aaKnown RBP11.93□□□□□ -0.5
VIPAS39-203ENST00000448935 FEM1BQ9UK73 627 aa11.93□□□□□ -0.5
VIPAS39-203ENST00000448935 PRR12Q9ULL5 1215 aa11.93□□□□□ -0.5
VIPAS39-203ENST00000448935 CTNND1O60716 968 aaKnown RBP11.92□□□□□ -0.5
VIPAS39-203ENST00000448935 LMNB1P20700 586 aa11.92□□□□□ -0.5
VIPAS39-203ENST00000448935 ERCC5P28715 1186 aaPredicted RBP11.92□□□□□ -0.5
VIPAS39-203ENST00000448935 CLCN1P35523 988 aa11.92□□□□□ -0.5
VIPAS39-203ENST00000448935 ECE1P42892 770 aa11.92□□□□□ -0.5
VIPAS39-203ENST00000448935 AFMP43652 599 aa11.92□□□□□ -0.5
VIPAS39-203ENST00000448935 DPYDQ12882 1025 aa11.92□□□□□ -0.5
VIPAS39-203ENST00000448935 UBE2SQ16763 222 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms