RNA–Protein interactions for RNA: ENST00000448850.5

APP-210, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-210ENST00000448850 POLR2MP0CAP2 368 aa16.66■□□□□ 0.26
APP-210ENST00000448850 ERVK-9P63128 1117 aa16.66■□□□□ 0.26
APP-210ENST00000448850 ERVK-24P63145 666 aa16.66■□□□□ 0.26
APP-210ENST00000448850 GHRHRQ02643 423 aa16.66■□□□□ 0.26
APP-210ENST00000448850 Q3C1V9 767 aa16.66■□□□□ 0.26
APP-210ENST00000448850 MCTP2Q6DN12 878 aa16.66■□□□□ 0.26
APP-210ENST00000448850 PIK3AP1Q6ZUJ8 805 aa16.66■□□□□ 0.26
APP-210ENST00000448850 SAMD3Q8N6K7 520 aa16.66■□□□□ 0.26
APP-210ENST00000448850 CHST13Q8NET6 341 aa16.66■□□□□ 0.26
APP-210ENST00000448850 ACAD9Q9H845 621 aa16.66■□□□□ 0.26
APP-210ENST00000448850 FAM205CA6NFA0 338 aa16.66■□□□□ 0.26
APP-210ENST00000448850 SLC25A27O95847 323 aa16.66■□□□□ 0.26
APP-210ENST00000448850 HOXA13P31271 388 aaPredicted RBP16.66■□□□□ 0.26
APP-210ENST00000448850 COPB2P35606 906 aa16.66■□□□□ 0.26
APP-210ENST00000448850 HSD17B4P51659 736 aa16.66■□□□□ 0.26
APP-210ENST00000448850 AP3B2Q13367 1082 aa16.66■□□□□ 0.26
APP-210ENST00000448850 ANKRD13CQ8N6S4 541 aa16.66■□□□□ 0.26
APP-210ENST00000448850 GPRC5AQ8NFJ5 357 aa16.66■□□□□ 0.26
APP-210ENST00000448850 MAP3K20Q9NYL2 800 aaKnown RBP16.66■□□□□ 0.26
APP-210ENST00000448850 MORF4L1Q9UBU8 362 aa16.66■□□□□ 0.26
APP-210ENST00000448850 FBXO40Q9UH90 709 aa16.66■□□□□ 0.26
APP-210ENST00000448850 ADGRA2Q96PE1 1338 aa16.65■□□□□ 0.26
APP-210ENST00000448850 FOSP01100 380 aaPredicted RBP16.65■□□□□ 0.26
APP-210ENST00000448850 HTRA3P83110 453 aa16.65■□□□□ 0.26
APP-210ENST00000448850 DNM1Q05193 864 aaKnown RBP16.65■□□□□ 0.26
APP-210ENST00000448850 NONOQ15233 471 aaKnown RBP eCLIP16.65■□□□□ 0.26
APP-210ENST00000448850 RILPL1Q5EBL4 403 aa16.65■□□□□ 0.26
APP-210ENST00000448850 CLEC17AQ6ZS10 378 aa16.65■□□□□ 0.26
APP-210ENST00000448850 NCAPG2Q86XI2 1143 aa16.65■□□□□ 0.26
APP-210ENST00000448850 CHAMP1Q96JM3 812 aa16.65■□□□□ 0.26
APP-210ENST00000448850 ZNF396Q96N95 335 aaPredicted RBP16.65■□□□□ 0.26
APP-210ENST00000448850 MAF1Q9H063 256 aa16.65■□□□□ 0.26
APP-210ENST00000448850 THSD7BQ9C0I4 1608 aa16.65■□□□□ 0.26
APP-210ENST00000448850 BAG4O95429 457 aaKnown RBP16.64■□□□□ 0.25
APP-210ENST00000448850 ATL3Q6DD88 541 aa16.64■□□□□ 0.25
APP-210ENST00000448850 NSMFQ6X4W1 530 aa16.64■□□□□ 0.25
APP-210ENST00000448850 RNF207Q6ZRF8 634 aa16.64■□□□□ 0.25
APP-210ENST00000448850 PGBD1Q96JS3 809 aa16.64■□□□□ 0.25
APP-210ENST00000448850 NOL7Q9UMY1 257 aaKnown RBP16.64■□□□□ 0.25
APP-210ENST00000448850 SPDYE3A6NKU9 549 aa16.63■□□□□ 0.25
APP-210ENST00000448850 ALDH1A1P00352 501 aa16.63■□□□□ 0.25
APP-210ENST00000448850 ERCC3P19447 782 aa16.63■□□□□ 0.25
APP-210ENST00000448850 VEGFBP49765 207 aa16.63■□□□□ 0.25
APP-210ENST00000448850 TOB1P50616 345 aaPredicted RBP16.63■□□□□ 0.25
APP-210ENST00000448850 RPS6P62753 249 aaKnown RBP16.63■□□□□ 0.25
APP-210ENST00000448850 CCNA1P78396 465 aa16.63■□□□□ 0.25
APP-210ENST00000448850 FAM110CQ1W6H9 321 aa16.63■□□□□ 0.25
APP-210ENST00000448850 SHCBP1Q8NEM2 672 aa16.63■□□□□ 0.25
APP-210ENST00000448850 GBP4Q96PP9 640 aa16.63■□□□□ 0.25
APP-210ENST00000448850 ANO3Q9BYT9 981 aa16.63■□□□□ 0.25
APP-210ENST00000448850 ZFYVE28Q9HCC9 887 aa16.63■□□□□ 0.25
APP-210ENST00000448850 KIAA1217Q5T5P2 1943 aa16.63■□□□□ 0.25
APP-210ENST00000448850 MAP2K2P36507 400 aa16.63■□□□□ 0.25
APP-210ENST00000448850 TRAPPC10P48553 1259 aa16.63■□□□□ 0.25
APP-210ENST00000448850 KRT85P78386 507 aa16.63■□□□□ 0.25
APP-210ENST00000448850 INF2Q27J81 1249 aa16.63■□□□□ 0.25
APP-210ENST00000448850 FCHSD1Q86WN1 690 aa16.63■□□□□ 0.25
APP-210ENST00000448850 TBCKQ8TEA7 893 aa16.63■□□□□ 0.25
APP-210ENST00000448850 MROH8Q9H579 483 aa16.63■□□□□ 0.25
APP-210ENST00000448850 A1CFQ9NQ94 594 aaKnown RBP16.63■□□□□ 0.25
APP-210ENST00000448850 TFIP11Q9UBB9 837 aaKnown RBP16.63■□□□□ 0.25
APP-210ENST00000448850 CFAP45Q9UL16 551 aa16.63■□□□□ 0.25
APP-210ENST00000448850 MCM3APO60318 1980 aa16.62■□□□□ 0.25
APP-210ENST00000448850 CA12O43570 354 aa16.62■□□□□ 0.25
APP-210ENST00000448850 TLR2O60603 784 aa16.62■□□□□ 0.25
APP-210ENST00000448850 BCRP11274 1271 aa16.62■□□□□ 0.25
APP-210ENST00000448850 NCLP19338 710 aaKnown RBP16.62■□□□□ 0.25
APP-210ENST00000448850 BAATQ14032 418 aaPredicted RBP16.62■□□□□ 0.25
APP-210ENST00000448850 SLC30A10Q6XR72 485 aa16.62■□□□□ 0.25
APP-210ENST00000448850 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.62■□□□□ 0.25
APP-210ENST00000448850 SYTL5Q8TDW5 730 aaPredicted RBP16.62■□□□□ 0.25
APP-210ENST00000448850 USP28Q96RU2 1077 aa16.62■□□□□ 0.25
APP-210ENST00000448850 CPA4Q9UI42 421 aa16.62■□□□□ 0.25
APP-210ENST00000448850 ATP2B1P20020 1258 aa16.61■□□□□ 0.25
APP-210ENST00000448850 CRHR2Q13324 411 aa16.61■□□□□ 0.25
APP-210ENST00000448850 ANKRD35Q8N283 1001 aa16.61■□□□□ 0.25
APP-210ENST00000448850 PORCNQ9H237 461 aa16.61■□□□□ 0.25
APP-210ENST00000448850 R3HDMLQ9H3Y0 253 aa16.61■□□□□ 0.25
APP-210ENST00000448850 CYP39A1Q9NYL5 469 aa16.61■□□□□ 0.25
APP-210ENST00000448850 COL20A1Q9P218 1284 aa16.61■□□□□ 0.25
APP-210ENST00000448850 CNPY2Q9Y2B0 182 aa16.61■□□□□ 0.25
APP-210ENST00000448850 CEBPZQ03701 1054 aaKnown RBP16.61■□□□□ 0.25
APP-210ENST00000448850 TTC38Q5R3I4 469 aa16.61■□□□□ 0.25
APP-210ENST00000448850 C17orf99Q6UX52 265 aa16.61■□□□□ 0.25
APP-210ENST00000448850 NEK8Q86SG6 692 aa16.61■□□□□ 0.25
APP-210ENST00000448850 FTOQ9C0B1 505 aaKnown RBP eCLIP16.61■□□□□ 0.253e-6■□□□□ 11.1
APP-210ENST00000448850 EHMT1Q9H9B1 1298 aa16.61■□□□□ 0.25
APP-210ENST00000448850 EFCC1Q9HA90 598 aa16.61■□□□□ 0.25
APP-210ENST00000448850 POLR3EQ9NVU0 708 aa16.61■□□□□ 0.25
APP-210ENST00000448850 PCDHB6Q9Y5E3 794 aa16.61■□□□□ 0.25
APP-210ENST00000448850 PFASO15067 1338 aa16.61■□□□□ 0.25
APP-210ENST00000448850 SREBF1P36956 1147 aa16.6■□□□□ 0.25
APP-210ENST00000448850 NBR1Q14596 966 aa16.6■□□□□ 0.25
APP-210ENST00000448850 WDR78Q5VTH9 848 aa16.6■□□□□ 0.25
APP-210ENST00000448850 ANO1Q5XXA6 986 aa16.6■□□□□ 0.25
APP-210ENST00000448850 CCAR1Q8IX12 1150 aaKnown RBP16.6■□□□□ 0.25
APP-210ENST00000448850 RTEL1Q9NZ71 1219 aa16.6■□□□□ 0.25
APP-210ENST00000448850 CLIC4Q9Y696 253 aa16.6■□□□□ 0.25
APP-210ENST00000448850 WNT7AO00755 349 aa16.59■□□□□ 0.25
APP-210ENST00000448850 HSPA6P17066 643 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms