RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 FAM84BQ96KN1 310 aaPredicted RBP4.18□□□□□ -1.74
PMS1-215ENST00000447232 CFAP53Q96M91 514 aa4.18□□□□□ -1.74
PMS1-215ENST00000447232 METTL22Q9BUU2 404 aaPredicted RBP4.18□□□□□ -1.74
PMS1-215ENST00000447232 PLA2G12BQ9BX93 195 aa4.18□□□□□ -1.74
PMS1-215ENST00000447232 MTIF3Q9H2K0 278 aaKnown RBP4.18□□□□□ -1.74
PMS1-215ENST00000447232 IL23AQ9NPF7 189 aa4.18□□□□□ -1.74
PMS1-215ENST00000447232 ZNF236Q9UL36 1845 aa4.18□□□□□ -1.74
PMS1-215ENST00000447232 SLC15A5A6NIM6 579 aa4.17□□□□□ -1.74
PMS1-215ENST00000447232 DCDC2CA8MYV0 355 aa4.17□□□□□ -1.74
PMS1-215ENST00000447232 IGKV5-2P06315 115 aa4.17□□□□□ -1.74
PMS1-215ENST00000447232 NBL1P41271 181 aa4.17□□□□□ -1.74
PMS1-215ENST00000447232 SPP2Q13103 211 aa4.17□□□□□ -1.74
PMS1-215ENST00000447232 GRB10Q13322 594 aa4.17□□□□□ -1.74
PMS1-215ENST00000447232 LBRQ14739 615 aaKnown RBP4.17□□□□□ -1.74
PMS1-215ENST00000447232 TLR1Q15399 786 aa4.17□□□□□ -1.74
PMS1-215ENST00000447232 FAM47AQ5JRC9 791 aa4.17□□□□□ -1.74
PMS1-215ENST00000447232 C1orf229Q6ZS94 237 aaPredicted RBP4.17□□□□□ -1.74
PMS1-215ENST00000447232 TMEM199Q8N511 208 aa4.17□□□□□ -1.74
PMS1-215ENST00000447232 BEND7Q8N7W2 519 aaPredicted RBP4.17□□□□□ -1.74
PMS1-215ENST00000447232 PLPP7Q8NBV4 271 aa4.17□□□□□ -1.74
PMS1-215ENST00000447232 TBC1D22AQ8WUA7 517 aa4.17□□□□□ -1.74
PMS1-215ENST00000447232 RMDN1Q96DB5 314 aa4.17□□□□□ -1.74
PMS1-215ENST00000447232 FSD1Q9BTV5 496 aa4.17□□□□□ -1.74
PMS1-215ENST00000447232 OXCT2Q9BYC2 517 aaPredicted RBP4.17□□□□□ -1.74
PMS1-215ENST00000447232 PRKAG3Q9UGI9 489 aa4.17□□□□□ -1.74
PMS1-215ENST00000447232 UNC79Q9P2D8 2635 aa4.17□□□□□ -1.74
PMS1-215ENST00000447232 CA3P07451 260 aa4.17□□□□□ -1.74
PMS1-215ENST00000447232 HIBADHP31937 336 aaKnown RBP4.17□□□□□ -1.74
PMS1-215ENST00000447232 MAP2K3P46734 347 aa4.17□□□□□ -1.74
PMS1-215ENST00000447232 GYG1P46976 350 aa4.17□□□□□ -1.74
PMS1-215ENST00000447232 GDF10P55107 478 aa4.17□□□□□ -1.74
PMS1-215ENST00000447232 ATP2B2Q01814 1243 aa4.17□□□□□ -1.74
PMS1-215ENST00000447232 SEMA3FQ13275 785 aa4.17□□□□□ -1.74
PMS1-215ENST00000447232 GRB14Q14449 540 aa4.17□□□□□ -1.74
PMS1-215ENST00000447232 CDC42EP5Q6NZY7 148 aa4.17□□□□□ -1.74
PMS1-215ENST00000447232 DGLUCYQ7Z3D6 616 aa4.17□□□□□ -1.74
PMS1-215ENST00000447232 PGBD3Q8N328 593 aa4.17□□□□□ -1.74
PMS1-215ENST00000447232 ZNF280CQ8ND82 737 aa4.17□□□□□ -1.74
PMS1-215ENST00000447232 NEK9Q8TD19 979 aa4.17□□□□□ -1.74
PMS1-215ENST00000447232 EDAQ92838 391 aa4.17□□□□□ -1.74
PMS1-215ENST00000447232 CERS4Q9HA82 394 aa4.17□□□□□ -1.74
PMS1-215ENST00000447232 LMCD1Q9NZU5 365 aa4.17□□□□□ -1.74
PMS1-215ENST00000447232 SUGT1Q9Y2Z0 365 aa4.17□□□□□ -1.74
PMS1-215ENST00000447232 RFX7Q2KHR2 1363 aa4.17□□□□□ -1.74
PMS1-215ENST00000447232 ATAD5Q96QE3 1844 aa4.17□□□□□ -1.74
PMS1-215ENST00000447232 WDR87Q6ZQQ6 2873 aa4.17□□□□□ -1.74
PMS1-215ENST00000447232 SMCHD1A6NHR9 2005 aa4.17□□□□□ -1.74
PMS1-215ENST00000447232 MAST3O60307 1309 aa4.16□□□□□ -1.74
PMS1-215ENST00000447232 KRTAP9-6A0A140TA67 174 aa4.16□□□□□ -1.74
PMS1-215ENST00000447232 C2CD2LO14523 706 aa4.16□□□□□ -1.74
PMS1-215ENST00000447232 FGBP02675 491 aa4.16□□□□□ -1.74
PMS1-215ENST00000447232 KCNA5P22460 613 aa4.16□□□□□ -1.74
PMS1-215ENST00000447232 IRX3P78415 501 aaPredicted RBP4.16□□□□□ -1.74
PMS1-215ENST00000447232 TAP1Q03518 808 aa4.16□□□□□ -1.74
PMS1-215ENST00000447232 ST3GAL2Q16842 350 aa4.16□□□□□ -1.74
PMS1-215ENST00000447232 OLFML2BQ68BL8 750 aa4.16□□□□□ -1.74
PMS1-215ENST00000447232 VWCEQ96DN2 955 aa4.16□□□□□ -1.74
PMS1-215ENST00000447232 CRISPLD1Q9H336 500 aa4.16□□□□□ -1.74
PMS1-215ENST00000447232 PHAXQ9H814 394 aaKnown RBP4.16□□□□□ -1.74
PMS1-215ENST00000447232 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.16□□□□□ -1.74
PMS1-215ENST00000447232 NDFIP2Q9NV92 336 aa4.16□□□□□ -1.74
PMS1-215ENST00000447232 LRRFIP2Q9Y608 721 aaKnown RBP4.16□□□□□ -1.74
PMS1-215ENST00000447232 ROBO3Q96MS0 1386 aa4.16□□□□□ -1.74
PMS1-215ENST00000447232 ZNF536O15090 1300 aa4.16□□□□□ -1.74
PMS1-215ENST00000447232 TMEM221A6NGB7 291 aa4.16□□□□□ -1.74
PMS1-215ENST00000447232 M0R296 226 aa4.16□□□□□ -1.74
PMS1-215ENST00000447232 CHL1O00533 1208 aa4.16□□□□□ -1.74
PMS1-215ENST00000447232 BNIP3LO60238 219 aa4.16□□□□□ -1.74
PMS1-215ENST00000447232 CNMDO75829 334 aa4.16□□□□□ -1.74
PMS1-215ENST00000447232 PRKCSHP14314 528 aaPredicted RBP4.16□□□□□ -1.74
PMS1-215ENST00000447232 CDK7P50613 346 aa4.16□□□□□ -1.74
PMS1-215ENST00000447232 SMTNP53814 917 aa4.16□□□□□ -1.74
PMS1-215ENST00000447232 CASP7P55210 303 aa4.16□□□□□ -1.74
PMS1-215ENST00000447232 TMEM67Q5HYA8 995 aa4.16□□□□□ -1.74
PMS1-215ENST00000447232 EFHC2Q5JST6 749 aa4.16□□□□□ -1.74
PMS1-215ENST00000447232 KRTAP5-3Q6L8H2 238 aa4.16□□□□□ -1.74
PMS1-215ENST00000447232 OTOP2Q7RTS6 562 aa4.16□□□□□ -1.74
PMS1-215ENST00000447232 ADHFE1Q8IWW8 467 aa4.16□□□□□ -1.74
PMS1-215ENST00000447232 SUGP1Q8IWZ8 645 aaKnown RBP4.16□□□□□ -1.74
PMS1-215ENST00000447232 ZNF295-AS1Q8N0V1 137 aa4.16□□□□□ -1.74
PMS1-215ENST00000447232 FBXL6Q8N531 539 aa4.16□□□□□ -1.74
PMS1-215ENST00000447232 GALNT6Q8NCL4 622 aa4.16□□□□□ -1.74
PMS1-215ENST00000447232 GTF3C2Q8WUA4 911 aaPredicted RBP4.16□□□□□ -1.74
PMS1-215ENST00000447232 PBXIP1Q96AQ6 731 aa4.16□□□□□ -1.74
PMS1-215ENST00000447232 KRTAP9-2Q9BYQ4 174 aa4.16□□□□□ -1.74
PMS1-215ENST00000447232 UPF3BQ9BZI7 483 aaKnown RBP4.16□□□□□ -1.74
PMS1-215ENST00000447232 MUTYHQ9UIF7 546 aa4.16□□□□□ -1.74
PMS1-215ENST00000447232 RALYQ9UKM9 306 aaKnown RBP4.16□□□□□ -1.74
PMS1-215ENST00000447232 ATXN7L1Q9ULK2 861 aaPredicted RBP4.16□□□□□ -1.74
PMS1-215ENST00000447232 SLC4A7Q9Y6M7 1214 aa4.16□□□□□ -1.74
PMS1-215ENST00000447232 TMEM229AB2RXF0 380 aa4.15□□□□□ -1.74
PMS1-215ENST00000447232 SHISA8B8ZZ34 492 aa4.15□□□□□ -1.74
PMS1-215ENST00000447232 PIK3CDO00329 1044 aa4.15□□□□□ -1.74
PMS1-215ENST00000447232 GLRX3O76003 335 aaKnown RBP4.15□□□□□ -1.74
PMS1-215ENST00000447232 IGHA1P01876 353 aa4.15□□□□□ -1.74
PMS1-215ENST00000447232 ATP2A2P16615 1042 aaKnown RBP4.15□□□□□ -1.74
PMS1-215ENST00000447232 SOX11P35716 441 aa4.15□□□□□ -1.74
PMS1-215ENST00000447232 VCPP55072 806 aaKnown RBP4.15□□□□□ -1.74
PMS1-215ENST00000447232 SNRPNP63162 240 aaKnown RBP4.15□□□□□ -1.74
PMS1-215ENST00000447232 UBE4AQ14139 1066 aa4.15□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms